prot_H-elongata_contig19625.5470.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19625.5470.1
Unique Nameprot_H-elongata_contig19625.5470.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length719
Homology
BLAST of mRNA_H-elongata_contig19625.5470.1 vs. uniprot
Match: D8LBI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI8_ECTSI)

HSP 1 Score: 577 bits (1487), Expect = 1.380e-180
Identity = 429/730 (58.77%), Postives = 481/730 (65.89%), Query Frame = 0
Query:   36 PPPPQVLFFDEFAHHLGPGQQFKDGGEVDEVKFREAVIVRIIHVVPKGETPTQVSLPPTFRGITQTEPFQLEVFCKNLNNLQSSSFDTLMPTANVIRGAVYTLPHEIVTNHLVIRGYFQAMSVVICGTVVPRSALSPAAVQALISSTSKPTMDAPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAXXXXXXXXXXXXXXXARKVAGAASPAVSAVKKDGKAGGSADSKPSAA----------------TSSVRSPAPVSSAASXXXXXXXPPKSWAPLDLPPVEMTTMAASTAMGDRGSAGAGTVGGISPGDLAPYGEADLAVALTCAPERLQRIAAEANPFDDLFLVPEAAARRVGEAVSRLVSLAGKGGAAGREAECNALEATSESVEACFRQATPTKWEKS-----------IQLAEKNTAASASTA--FVSSRKTFDENVSETLATAVIRSLRFFRVAAAGTEAACI------SRHGGGEHVPAVSVSPDGTVTVDDGPRRVALAGLRLAGVVATAPGPARALLAAGGFHVLWRLPSDPAATPTGIALALGALCQGVKHADVLRVFLTRWDDAEDADPSGQKQEEKGLDRLGGYEACALVLSGPVAHPAALSRGRSIMQYVAVVECLKHVRSLAAKAGTIVVAXXXXXXXXXXXXXXAPKAAANTAHSKARGGRVAVA-----------GPSAVKGMEELAHALGALEALLAEGAGDTSASG 719
            P PPQVLFF EF          K+ GE+DEVKFREAV+ RIIHVVP GE PTQV+LPPTFRGITQ EPFQLEVFCKNLNNL S  FD LMPTA V  GAVYT+P +IVTNHLVIRG FQAMSVVICGTVVPR+ALSP A+QAL  S  KP +  PSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXX                                                 +S   P P   ++S        PK+WAPL LP    T    + A+G  G+ G     G+SP DLAPYGEA+L+ ALT  PERLQR AAEANPFDD FLVP  AAR V EAV+RLVSLA + G AGR  EC AL+A ++ VEACFR+ TP K  +            + + + +T A+  T    V S + F+++VS  LATAVIRSLRFFR AAAGTEA  I         GGG H PAV+V  DG+VTVDDG RRVALAGLRLAG VATAP PA ALLAAGGFHVLWRLP DPAATP G+ALALGALCQG++HADVLRVFLTRW++  D    G + E  GL RLGGYEACA VLS  VAHPAALSRGRSIMQYVA+VECL+ VR LA KAGT V                   AAA  A +  + G                GP+AVKGME+LAHALGALEAL++EGAG+TSASG
Sbjct:    3 PSPPQVLFFGEFRP--------KETGELDEVKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEVFCKNLNNLHSKYFDRLMPTATVPGGAVYTMPQDIVTNHLVIRGSFQAMSVVICGTVVPRTALSPDAIQALTVS-DKPPLGGPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASPSGPGPSKDSSSL-------PKAWAPLALPAAAAT----AAAVGQGGTTG----DGVSPADLAPYGEAELSTALTVPPERLQRSAAEANPFDDRFLVPADAARGVKEAVARLVSLADESGPAGRNLECEALDAAADCVEACFRRQTPAKKGEEGGQQGGLVPSPVAVEQGSTVATTGTTATVVPSSEAFNDDVSGPLATAVIRSLRFFRAAAAGTEAGSIPAGEGEEERGGGRHTPAVAVLADGSVTVDDGHRRVALAGLRLAGAVATAPSPAGALLAAGGFHVLWRLPLDPAATPMGVALALGALCQGIRHADVLRVFLTRWEEGVDDGAGGAEAE--GLSRLGGYEACASVLSRQVAHPAALSRGRSIMQYVALVECLQLVRKLATKAGTTV-------------------AAAKAAEATGKDGXXXXXXXXXXXXXXXXGPAAVKGMEDLAHALGALEALMSEGAGETSASG 687          
BLAST of mRNA_H-elongata_contig19625.5470.1 vs. uniprot
Match: A0A6H5JNJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ9_9PHAE)

HSP 1 Score: 521 bits (1343), Expect = 4.520e-160
Identity = 409/691 (59.19%), Postives = 458/691 (66.28%), Query Frame = 0
Query:   61 GEVDEVKFREAVIVRIIHVVPKGETPTQVSLPPTFRGITQTEPFQLEVFCKNLNNLQSSSFDTLMPTANVIRGAVYTLPHEIVTNHLVIRGYFQAMSVVICGTVVPRSALSPAAVQALISSTSKPTMDAPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAXXXXXXXXXXXXXXXARKVAGAASPAVSAVKKDGKAGGSADSKPSAAT------SSVRSPAPVSSAASXXXXXXXPPKSWAPLDLPPVEMTTMAASTAMGDRGSAGAGTVGGISPGDLAPYGEADLAVALTCAPERLQRIAAEANPFDDLFLVPEAAARRVGEAVSRLVSLAGKGGAAGREAECNALEATSESVEACFRQATPTKWEKS-----------IQLAEKNTAASAST--AFVSSRKTFDENVSETLATAVIRSLRFFRVAAAGTEAACI------SRHGGGEHVPAVSVSPDGTVTVDDGPRRVALAGLRLAGVVATAPGPARALLAAGGFHVLWRLPSDPAATPTGIALALGALCQGVKHADVLRVFLTRWDDAEDADPSGQKQEEKGLDRLGGYEACALVLSGPVAHPAALSRGRSIMQYVAVV-------ECLKHVRSLAAKAGTIVVAXXXXXXXXXXXXXXAPKAAANTAHSKARGGRVAVAGPSAVKGMEELAHALGALEALLAEGAGDTSASG 719
            G    VKFREAV+ RIIHVVP GE PTQV+LPPTFRGITQ EPFQLEVFCKNLNNL S  FD LMPTA V  GAVYT+P +IVTNHLVIRG FQAMSVVICGTVVPR+ALSP A+QAL  S  KP++  PSP       XXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXX                                       +S   P P   ++S        PK+WAPL LP    T    +  +G  G+ G     G+SP DLAPYGEADL+ ALT  PERLQR AAEANPFDD FLVP  AAR V EAV+RLVSL  + G AGR  EC AL+A ++ +EACFR+ T  K  +            + + + +T A+A T  A V S + F+++VS  LATAVIRSLRFFR AAAGTEA  I         GGG H PAV+V  DG+VTVDDG RRVALAGLRLAG VATAP PARALLAAGGFHVLWRLP DPAATP G+ALALGALCQG++HADVLRVFLTRW++  D    G + E  GL RLGGYEACA VLS  VAHPAALSRGRSIM             EC +  R    + G     XXXXXXXXXXXXXX   AAA            A AGP+AVKGME+LAHALGALEAL++EGAG+TSASG
Sbjct:   16 GTPTAVKFREAVVARIIHVVPAGEQPTQVALPPTFRGITQVEPFQLEVFCKNLNNLHSRYFDRLMPTATVPGGAVYTMPQDIVTNHLVIRGSFQAMSVVICGTVVPRTALSPGAIQALTVS-DKPSLGGPSPLPSALVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASPSGPGPSKDSSSL-------PKAWAPLALPAAAAT----AEVVGQGGTTG----DGVSPADLAPYGEADLSTALTVPPERLQRSAAEANPFDDRFLVPADAARGVKEAVARLVSLVDESGPAGRNLECEALDAAADRMEACFRRQTAAKKGEEGGKQGGLGPSPVAVEQGSTLATAGTTAAVVPSSEAFNDDVSGPLATAVIRSLRFFRTAAAGTEAGSIPAGEGEEERGGGRHTPAVAVLADGSVTVDDGHRRVALAGLRLAGAVATAPSPARALLAAGGFHVLWRLPLDPAATPMGVALALGALCQGIRHADVLRVFLTRWEEGVDDGAGGAEAE--GLSRLGGYEACASVLSRQVAHPAALSRGRSIMHRGEGGGGDGQGREC-RWGRGGCRRGGGGXXXXXXXXXXXXXXXXXXXXAAA-----------AAAAGPAAVKGMEDLAHALGALEALVSEGAGETSASG 676          
BLAST of mRNA_H-elongata_contig19625.5470.1 vs. uniprot
Match: A0A7S4DEG1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEG1_HETAK)

HSP 1 Score: 94.4 bits (233), Expect = 5.610e-18
Identity = 53/133 (39.85%), Postives = 78/133 (58.65%), Query Frame = 0
Query:   41 VLFFDEFAHHLGPGQQFKDGG-EVDEVKFREAVIVRIIHVVPKGETPTQVSLPPTFRGITQTEPFQLEVFCKNLNNLQSSSFDTLMPTANVIRGAVYTLPHEIVTNHLVIRGYFQAMSVVICGTVVPRSALSP 172
            +LF  +F H        KD   ++DE+ FREAV+V+   +VP G  P   +LP  F+ +TQ+E F LEVF K+L++   +SFD L P      G  +    E +TNHL++RG + A+S+ + G V+PR  LSP
Sbjct:    7 ILFVGDFQH--------KDLEIDIDEITFREAVVVKGFQIVPAGTNPHPETLP-NFKSVTQSEKFNLEVFAKDLSSPGKTSFDRLTPRFEGQGGVTFNTQDEQITNHLILRGSYTALSICLYGNVIPRPQLSP 130          
BLAST of mRNA_H-elongata_contig19625.5470.1 vs. uniprot
Match: A0A1Y1IHP4_KLENI (VIR_N domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHP4_KLENI)

HSP 1 Score: 66.2 bits (160), Expect = 2.270e-7
Identity = 47/132 (35.61%), Postives = 65/132 (49.24%), Query Frame = 0
Query:   40 QVLFFDEFAHHLGPGQQFKDGGEVDEVKFREAVIVRIIHVVPKGETPTQVSLPPTFRGITQTEPFQLEVFCKNLNNLQSSSFDTLMPTAN-VIRGAVYTL-PHEIVTNHLVIRGYFQAMSVVICGTVVPRSA 169
            +VL+ D F H             VDEV F++ VIV   H+VPK   P    L   F  +T   PF L+VF  N  +  +S F  L P  + V  G   ++ P  +VT HLV RG +Q +S++I G  +P  A
Sbjct:    2 EVLYCDSFLHEAA-------ADHVDEVLFKKPVIVSACHIVPKDGNPEPELL--EFFSLTSPPPFNLQVFYHN-GDQNASHFQKLGPQISWVADGGKESIDPQPVVTRHLVFRGNYQNLSLIIYGATIPDEA 123          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19625.5470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LBI8_ECTSI1.380e-18058.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNJ9_9PHAE4.520e-16059.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4DEG1_HETAK5.610e-1839.85Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1Y1IHP4_KLENI2.270e-735.61VIR_N domain-containing protein n=1 Tax=Klebsormid... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026736Protein virilizerPANTHERPTHR23185UNCHARACTERIZEDcoord: 37..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19625contigH-elongata_contig19625:1314..6573 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19625.5470.1mRNA_H-elongata_contig19625.5470.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19625 1314..6573 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19625.5470.1 ID=prot_H-elongata_contig19625.5470.1|Name=mRNA_H-elongata_contig19625.5470.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=719bp
LAGWGLLNTCSAAVDFDKSSMGPGDPHPSPMHLQSPPPPQVLFFDEFAHH
LGPGQQFKDGGEVDEVKFREAVIVRIIHVVPKGETPTQVSLPPTFRGITQ
TEPFQLEVFCKNLNNLQSSSFDTLMPTANVIRGAVYTLPHEIVTNHLVIR
GYFQAMSVVICGTVVPRSALSPAAVQALISSTSKPTMDAPSPPPSTLVAP
PPPPPPPPAPPPPPPPAPPPPRRAPPPKIPQPTVPPPPPARKVAGAASPA
VSAVKKDGKAGGSADSKPSAATSSVRSPAPVSSAASASSAQSAPPKSWAP
LDLPPVEMTTMAASTAMGDRGSAGAGTVGGISPGDLAPYGEADLAVALTC
APERLQRIAAEANPFDDLFLVPEAAARRVGEAVSRLVSLAGKGGAAGREA
ECNALEATSESVEACFRQATPTKWEKSIQLAEKNTAASASTAFVSSRKTF
DENVSETLATAVIRSLRFFRVAAAGTEAACISRHGGGEHVPAVSVSPDGT
VTVDDGPRRVALAGLRLAGVVATAPGPARALLAAGGFHVLWRLPSDPAAT
PTGIALALGALCQGVKHADVLRVFLTRWDDAEDADPSGQKQEEKGLDRLG
GYEACALVLSGPVAHPAALSRGRSIMQYVAVVECLKHVRSLAAKAGTIVV
AVAEAETKVKVKAKAAPKAAANTAHSKARGGRVAVAGPSAVKGMEELAHA
LGALEALLAEGAGDTSASG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026736Virilizer