prot_H-elongata_contig106533.537.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig106533.537.1
Unique Nameprot_H-elongata_contig106533.537.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length161
Homology
BLAST of mRNA_H-elongata_contig106533.537.1 vs. uniprot
Match: D7FJZ0_ECTSI (Aa_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ0_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 1.980e-51
Identity = 89/116 (76.72%), Postives = 104/116 (89.66%), Query Frame = 0
Query:   38 EEPSSGVPVGTSIFNLVKNVVGAGILAIPGGVTAFSQAKSATVPAVAMIVALGSLSGYSFSLIGRVCAATGATSYGDAWAKTVGKRTAWLPTSSCTFKTFFACMIYAIIIGENYRE 153
            E  SSGV VG SIFNL+KNVVGAGILAIPGGVTAFSQ+++A VP VAMIVALG +SGY FSLIGRVCAATGA+SYGDAW+KT+G++T+WLPTSSCT KTFFACM Y+IIIG+ + +
Sbjct:   59 ESSSSGVTVGRSIFNLIKNVVGAGILAIPGGVTAFSQSRAAVVPTVAMIVALGGMSGYCFSLIGRVCAATGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIIGDVFAD 174          
BLAST of mRNA_H-elongata_contig106533.537.1 vs. uniprot
Match: A0A836CMH1_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH1_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.410e-36
Identity = 70/106 (66.04%), Postives = 82/106 (77.36%), Query Frame = 0
Query:   46 VGTSIFNLVKNVVGAGILAIPGGVTAFSQAKSATVPAVAMIVALGSLSGYSFSLIGRVCAATGATSYGDAWAKTVGKRTAWLPTSSCTFKTFFACMIYAIIIGENY 151
            VG SIFNLVKN+VG+GILA+PGGV AFS A+ A VPA  +I+ LG LSGY FSLIGR CAAT A SYGDAWA TV  +T W+P SS   KTFF C+ Y+IIIG+ +
Sbjct:   29 VGGSIFNLVKNIVGSGILALPGGVAAFSHARGAVVPASVLILLLGLLSGYCFSLIGRACAATNARSYGDAWAATVEPKTVWMPLSSVVAKTFFTCLSYSIIIGDTF 134          
BLAST of mRNA_H-elongata_contig106533.537.1 vs. uniprot
Match: A0A6S9E4U8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E4U8_HETAK)

HSP 1 Score: 127 bits (319), Expect = 1.460e-31
Identity = 66/123 (53.66%), Postives = 85/123 (69.11%), Query Frame = 0
Query:   27 SAAAATIPIPKEEPSSGVPVGTSIFNLVKNVVGAGILAIPGGVTAFSQAKSATVPAVAMIVALGSLSGYSFSLIGRVCAATGATSYGDAWAKTVGKRTAWLPTSSCTFKTFFACMIYAIIIGE 149
            +AAAA      +   +G P+  SIFNLVK++VGAG+LA+PGGV AFS A  A   A  +  A+G LS Y FSLIGRVCAA  A +Y DAWAK++  +TAWLP  +C FKT   C++Y+IIIG+
Sbjct:   59 NAAAAAATTQSKVEDTGSPIPASIFNLVKSIVGAGVLALPGGVAAFSDAPGAMAAAAGLTGAMGLLSAYCFSLIGRVCAAYDAKTYFDAWAKSISPKTAWLPAFACNFKTLIGCILYSIIIGD 181          
BLAST of mRNA_H-elongata_contig106533.537.1 vs. uniprot
Match: A0A7S1Z4Z3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z4Z3_TRICV)

HSP 1 Score: 122 bits (305), Expect = 4.730e-30
Identity = 60/120 (50.00%), Postives = 85/120 (70.83%), Query Frame = 0
Query:   39 EPSSGVPVGTS-----IFNLVKNVVGAGILAIPGGVTAFSQAKSATVPAVAMIVALGSLSGYSFSLIGRVCAATGATSYGDAWAKTVGKRTAWLPTSSCTFKTFFACMIYAIIIGENYRE 153
            EP S V  GTS     IFNLVK++VGAG+L++P G+ +FS A    +PA  +I A+G++SGY FSLIGRVC+ T A SY DAW+K+VG  ++W+P  SCTFKT  A + Y++I+ + ++ 
Sbjct:    1 EPVSSVGGGTSTIPNHIFNLVKSIVGAGVLSLPAGIASFSNAPGGLLPATVLIAAIGAISGYGFSLIGRVCSYTDADSYRDAWSKSVGDESSWIPAWSCTFKTLCAVLAYSMILADTFKS 120          
BLAST of mRNA_H-elongata_contig106533.537.1 vs. uniprot
Match: B7GCU1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GCU1_PHATC)

HSP 1 Score: 123 bits (308), Expect = 5.870e-30
Identity = 56/108 (51.85%), Postives = 81/108 (75.00%), Query Frame = 0
Query:   46 VGTSIFNLVKNVVGAGILAIPGGVTAFSQAKSATVPAVAMIVALGSLSGYSFSLIGRVCAATGATSYGDAWAKTVGKRTAWLPTSSCTFKTFFACMIYAIIIGENYRE 153
            V + IFNLVK +VG G+L++P G+ AF  A SA VPA+A+I  +G LSGY F++IGRVCA TGATSY DAW+++VG+ T+W+P  S T KTF AC+ +++++ + +  
Sbjct:  101 VASEIFNLVKAIVGVGVLSLPAGIAAFGDAPSALVPALALIAIIGVLSGYGFAIIGRVCAYTGATSYRDAWSRSVGEGTSWIPAWSTTLKTFLACLAFSMVLADTFSS 208          
BLAST of mRNA_H-elongata_contig106533.537.1 vs. uniprot
Match: A0A7S2R064_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R064_9STRA)

HSP 1 Score: 122 bits (307), Expect = 7.630e-30
Identity = 64/119 (53.78%), Postives = 85/119 (71.43%), Query Frame = 0
Query:   38 EEPSSGVPVGTS-------IFNLVKNVVGAGILAIPGGVTAFSQAKSATVPAVAMIVALGSLSGYSFSLIGRVCAATGATSYGDAWAKTVGKRTAWLPTSSCTFKTFFACMIYAIIIGE 149
            EE +S  PVGT        IFNLVK+VVGAG+L++P G+ AF  A SA +PA  +I   G LSGY+FSL+GRVCA TGA SY +AW+KTVG+ T+ +P +SCTFKT  A + Y++I+ +
Sbjct:   72 EEDASEAPVGTGTASMSNMIFNLVKSVVGAGVLSLPAGIGAFGNAPSAVLPATVLIAIFGGLSGYAFSLLGRVCAYTGALSYREAWSKTVGEETSIIPAASCTFKTSVAILAYSMILAD 190          
BLAST of mRNA_H-elongata_contig106533.537.1 vs. uniprot
Match: A0A7S2G3A0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3A0_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.110e-29
Identity = 58/108 (53.70%), Postives = 80/108 (74.07%), Query Frame = 0
Query:   46 VGTSIFNLVKNVVGAGILAIPGGVTAFSQAKSATVPAVAMIVALGSLSGYSFSLIGRVCAATGATSYGDAWAKTVGKRTAWLPTSSCTFKTFFACMIYAIIIGENYRE 153
            +   IFNLVK++VGAG+L++P G+ AFS A S  +PAV +I A+G  S Y FSLIGRVC+ TGATSY +AWA +VG++TA LPT SCTF T  A + Y++I+ + ++ 
Sbjct:   29 MSAEIFNLVKSIVGAGVLSLPAGIAAFSNAPSGAIPAVGLIAAIGMFSAYGFSLIGRVCSYTGATSYREAWANSVGEKTASLPTVSCTFMTTCATLAYSMILADTFKS 136          
BLAST of mRNA_H-elongata_contig106533.537.1 vs. uniprot
Match: A0A4D9CTY7_9STRA (Aa_trans domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTY7_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.210e-29
Identity = 58/113 (51.33%), Postives = 82/113 (72.57%), Query Frame = 0
Query:   41 SSGVPVGTSIFNLVKNVVGAGILAIPGGVTAFSQAKSATVPAVAMIVALGSLSGYSFSLIGRVCAATGATSYGDAWAKTVGKRTAWLPTSSCTFKTFFACMIYAIIIGENYRE 153
            + G  V T+ FNL+KN++GAG+L++P GV AFS    A VPAVA+ + +GSLS Y F+LI RVCA     +YG+AW K+VGK+TAW+  ++CTFKTF AC  ++III +++  
Sbjct:   91 NKGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSS 203          
BLAST of mRNA_H-elongata_contig106533.537.1 vs. uniprot
Match: A0A7S1YWB7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YWB7_TRICV)

HSP 1 Score: 115 bits (289), Expect = 1.300e-29
Identity = 56/109 (51.38%), Postives = 80/109 (73.39%), Query Frame = 0
Query:   50 IFNLVKNVVGAGILAIPGGVTAFSQAKSATVPAVAMIVALGSLSGYSFSLIGRVCAATGATSYGDAWAKTVGKRTAWLPTSSCTFKTFFACMIYAIIIGENYREGSGGL 158
            I NL+K+VVGAG+L++P G+ AF  A SA +P+V +I A+G++S Y FSLIGRVCA TGA+SY +AW KTVG  TA LP +S TF    A + Y +I+ + +++ +GG+
Sbjct:    5 ILNLIKSVVGAGVLSLPAGIAAFGDAPSALLPSVVLITAIGTISAYMFSLIGRVCAMTGASSYAEAWEKTVGPGTAILPAASSTFSCLAANLAYGMILADTFKDLAGGI 113          
BLAST of mRNA_H-elongata_contig106533.537.1 vs. uniprot
Match: A0A7S2JRD2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JRD2_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.430e-29
Identity = 56/107 (52.34%), Postives = 79/107 (73.83%), Query Frame = 0
Query:   46 VGTSIFNLVKNVVGAGILAIPGGVTAFSQAKSATVPAVAMIVALGSLSGYSFSLIGRVCAATGATSYGDAWAKTVGKRTAWLPTSSCTFKTFFACMIYAIIIGENYR 152
            +   IFNLVKN+VGAG+L++P G+ +F  A SA +PA A+I  +G+ SGY FS IGRVCA   ATSY DAW+KTVG+ T+W+P + CTFKT  A + Y++I+ + ++
Sbjct:   89 IPNEIFNLVKNIVGAGVLSLPAGIASFGNAPSAIIPATALIAVIGAASGYCFSAIGRVCAMENATSYRDAWSKTVGESTSWIPAAICTFKTSSANLAYSMILADTFK 195          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig106533.537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJZ0_ECTSI1.980e-5176.72Aa_trans domain-containing protein n=1 Tax=Ectocar... [more]
A0A836CMH1_9STRA2.410e-3666.04Transmembrane amino acid transporter protein-domai... [more]
A0A6S9E4U8_HETAK1.460e-3153.66Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1Z4Z3_TRICV4.730e-3050.00Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
B7GCU1_PHATC5.870e-3051.85Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2R064_9STRA7.630e-3053.78Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2G3A0_9STRA1.110e-2953.70Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9CTY7_9STRA1.210e-2951.33Aa_trans domain-containing protein n=3 Tax=Monodop... [more]
A0A7S1YWB7_TRICV1.300e-2951.38Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2JRD2_9STRA1.430e-2952.34Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013057Amino acid transporter, transmembrane domainPFAMPF01490Aa_transcoord: 46..150
e-value: 4.0E-10
score: 39.0
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 82..104
NoneNo IPR availableTMHMMTMhelixcoord: 50..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig106533contigH-elongata_contig106533:76..1963 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig106533.537.1mRNA_H-elongata_contig106533.537.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig106533 76..1963 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig106533.537.1 ID=prot_H-elongata_contig106533.537.1|Name=mRNA_H-elongata_contig106533.537.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=161bp
SHVDFFRDHNRGHNGAVMVAAEVSGGSAAAATIPIPKEEPSSGVPVGTSI
FNLVKNVVGAGILAIPGGVTAFSQAKSATVPAVAMIVALGSLSGYSFSLI
GRVCAATGATSYGDAWAKTVGKRTAWLPTSSCTFKTFFACMIYAIIIGEN
YREGSGGLSA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM