prot_H-elongata_contig19264.5332.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19264.5332.1
Unique Nameprot_H-elongata_contig19264.5332.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1094
Homology
BLAST of mRNA_H-elongata_contig19264.5332.1 vs. uniprot
Match: A0A6H5LGE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGE7_9PHAE)

HSP 1 Score: 590 bits (1520), Expect = 1.400e-186
Identity = 474/1117 (42.44%), Postives = 596/1117 (53.36%), Query Frame = 0
Query:    1 WEHQVKAWRRGFCGGRLGEAEGSRGGSGDASPVGLALALRLGTPTEAFRRLMDGEHRARRPLSVATLSTFVSAAEGLHAALSEEAAAAWRVSVCQNGVGGDGSRNHRPKGGTRRFAGAVSLGGVCSEVEIDIETVLGGLAKCWRLYRVGSRCASFVGRLMLEKAEGARAGAETTFPRNTVTAGTAMSAVAMAVRAYGKACTWLLASREPVISCFERLQGVAESVVTALATAEDAPIVQVQVQVAESVAPGPASISSEDHAMATIEGDSLLE-------NLQTAMSRALYEDYLLPALGVASA--AGSPASPLSIVLPPLAAHGREDRQQRSALEGIILKMVAFLTTRDMQRLAQPPELRQAGGDEARRSTPLATAVVCAGRVPWAACPLGLSHALAALDKQERVLVETVGDLRSSRSSSGGSGSSGLLSFVSPSSGDVVRGSEAVGGALPGRSGHRTPAEK--------EKRPAASALEWIAAARMVLAAYSEEINSEEMRGGTPDGVNSEVDSTAGD-RIIELACERHPSLVVSPKGGGGGSLANALLWAGRTRPLVSALVQLTSRGAVEGTGQVGGALTGPHRAQELLQLTGDYFSPTIDPLQALLVFGIPGRQIAARLDSLRRSSLDDARGEESLRRGIPLGSFEAQDSDAFPKGGSGGSVVDGSPGGDKMGLLLQTAARDYLSRRCAASLARGGDIVAWEEEKLSNARGAPEAWHAAVASNRALDRAILRYLIGAHLDDLRALEHSNSPNSPKRLGGGVEATGVGDSSGWFIQPKKTV---HGGR--GSWADAIFPLLTDQVSREQGGAAEGHLNTITSLVREVTWRGDLPEGIGSGCKGRGMSPEEASEVVTEARRRLPVTATAQAPTALDTGDTTVDREDIDANYDGGDDDERTTVVPWGYGGEGTRISRSPWPWGPRAVPPSAVGALVALAAALPAAGKLMGGVQVMLQVAAEVVKAAKXXXXXXXXXXXXXKSGRGTGRHAKQPPRDLSTASMISGTVRLDSNADLSEAFVADRIQEVSAVAESALLLYITEYCGRDPVLWASVIEYIRHVGDGRMGRAGSGFPAGGPVSGDSMAAERLVEALLRRCGEELGGRALVGALPEELDLVEC 1094
            W  ++ AWR GFCG  LG  + +     + +P  LAL LRL +PT A R L   E  + RP        F+SAAEGLH AL+ E +AAWR  V   G+ G  S            AG  S   V  +V I  ET+L GL  CWRL RV +RCAS +G+L+LE A  A   AE          G A          Y +AC+WLLAS EPV+  F  LQ VA  V  A    E   +V             P+ +S +D      EG+S L        +L+  + RA+YE YLLP+ GV      G P   L     P++  G     Q  +L+ ++  +V++L   D+QRL+  P L     D   R TPL+TAVV A R PW  CP+ LS AL ALD+Q++ L E+     + RS+SG SG+S L    S      ++          G +GH+ PA          ++   +   EWIA AR +L+ Y E++      GG P+       + A D +I++LACERHP+LV +P  GG G LA  LL AGR +P+V+ALV LTS G   G    G    GP +A ELLQL  D FSP IDPLQAL VFG PGRQIA RLDS RR+SLD + G      G   G F     DA+ +       VD  P   +    L  AARD+LSRRC+ASLA     V   +E++S A GAPEAW A++A  RALDRA+LRYLI AHLDDLR+LE+S + N PK   G   A   G SSG       T    H  R   +WADAI PLL+ QVS+ +G  AE H++ I  LVRE+T RG       S      M+ E A EVVTEA+RRLP T  + A T            D D N    DD +     PWG GGEGT   R+PWPWGPRAVP SAVGA++ALAAALP AGKL+ G+ VMLQV  EVV AAK    XXXXXXXXX   +G+ R                  +R DS  D   A  +  ++EVS  AE ALLLY  EYCG+DP  WASV E++R+    ++   GS    G          + LV ALL+RCG ELGG+ALV ALPE LDL++C
Sbjct:  359 WSRKLAAWRNGFCG--LGGNKAT-----EYTPSPLALFLRLRSPTAAVRLLSVAEECSERPHPAKVSDMFLSAAEGLHNALTFEVSAAWRAGV---GLAGTAST----------LAGHGSSSSVAEQVRI--ETILPGLVNCWRLQRVAARCASLLGQLLLETALSA---AEQGSAEGDCATGLA----------YTRACSWLLASGEPVVESFASLQDVAARVSVAGDETELTAVV-------------PSFVSLDDDE----EGNSYLTTAEVPPLDLEELLPRAMYELYLLPSFGVRDTPGVGPPRLALDSSAIPISESGEP---QSLSLDDVLSGLVSYLHREDIQRLSLRPGLPSVW-DGTPRYTPLSTAVVYASRAPWTECPVALSQALLALDEQDKTLNESTSS--NIRSNSGSSGAS-LSRKTSRGGLKRLKSKTRPRHERSGSTGHQKPASSLDDRDPTDDETTLSPTQEWIAVARAILSGYLEQMGG---TGGQPEAPRQGRSALAADSQILQLACERHPTLV-APLRGGAGPLARDLLAAGRVKPVVAALVTLTSCGDGGGRAGCGEGSFGPQKAPELLQLKDDCFSPKIDPLQALYVFGAPGRQIAERLDSFRRASLDLS-GPFCSTIGARPGLFH---DDAYEQNSE---AVDSRPNPSET-KSLSAAARDFLSRRCSASLATAALSVR-HQERISQALGAPEAWRASLARTRALDRAVLRYLISAHLDDLRSLENSAAGN-PKTPDGKPTAD-TGRSSGSVKTGSDTRTNNHRDREYSTWADAIVPLLSGQVSKARG--AEEHVDAILRLVREITRRGRSANNSLSDGNRCSMNHEVAEEVVTEAKRRLPATELSPASTGASV--------DYDGNGHINDDTQ-----PWGSGGEGTGKGRAPWPWGPRAVPASAVGAILALAAALPPAGKLLAGLDVMLQVGEEVVAAAKAESAXXXXXXXXXXXXKGSAR--------------AGDVIRKDSGLDAGVAVAS--VEEVSCAAERALLLYAGEYCGKDPDRWASVTEHVRNSRASQVREGGSVDAPG----------QDLVRALLQRCGAELGGQALVRALPENLDLMDC 1360          
BLAST of mRNA_H-elongata_contig19264.5332.1 vs. uniprot
Match: D7FV98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV98_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 5.760e-31
Identity = 106/234 (45.30%), Postives = 133/234 (56.84%), Query Frame = 0
Query:  464 IAAARMVLAAYSEEINSEEMRGGT---PDGVNSEVDSTAGD-RIIELACERHPSLVVSPKGGGGGSLANALLWAGRTRPLVSALVQLTSRGAVEGTGQVGGALTGPHRAQELLQLTGDYFSPTIDPLQALLVFGIPGRQIAARLDSLRRSSLDDARGEESLRRGIPLGSFEAQDSDAFPKGGSGGSVVDGSPGGDKMGLLLQTAARDYLSRRCAASLARGGDIVAWEEEKLSNA 693
            +A     LA ++   ++ E  GGT   P+       + A D +I++LACERHP+LV +P  GG G LA  LL AGR +P+V+ALV LTS G   G    G    GPH+A+ELLQL  D FSP IDPLQAL VFG PGRQIA RL S RR+SLD +    S     P G F     DA+ +       VD  P   +    L  AARD+LSRRC+ASLA     V   +E++S A
Sbjct:  578 LAGTASTLAGHASSSSAAEQMGGTGGQPEAPRQGRSALAADSQILQLACERHPTLV-APLRGGAGPLARDLLAAGRVKPVVAALVTLTSCGDGGGRAGCGEGSFGPHKARELLQLKDDCFSPKIDPLQALYVFGAPGRQIAQRLGSFRRASLDLSGPFCSTIEARP-GLFH---DDAYEQNSE---AVDSRPNPSET-KALSAAARDFLSRRCSASLATAVLSVR-HQERISQA 801          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19264.5332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LGE7_9PHAE1.400e-18642.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV98_ECTSI5.760e-3145.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19264contigH-elongata_contig19264:624..7102 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19264.5332.1mRNA_H-elongata_contig19264.5332.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19264 624..7102 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19264.5332.1 ID=prot_H-elongata_contig19264.5332.1|Name=mRNA_H-elongata_contig19264.5332.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1094bp
WEHQVKAWRRGFCGGRLGEAEGSRGGSGDASPVGLALALRLGTPTEAFRR
LMDGEHRARRPLSVATLSTFVSAAEGLHAALSEEAAAAWRVSVCQNGVGG
DGSRNHRPKGGTRRFAGAVSLGGVCSEVEIDIETVLGGLAKCWRLYRVGS
RCASFVGRLMLEKAEGARAGAETTFPRNTVTAGTAMSAVAMAVRAYGKAC
TWLLASREPVISCFERLQGVAESVVTALATAEDAPIVQVQVQVAESVAPG
PASISSEDHAMATIEGDSLLENLQTAMSRALYEDYLLPALGVASAAGSPA
SPLSIVLPPLAAHGREDRQQRSALEGIILKMVAFLTTRDMQRLAQPPELR
QAGGDEARRSTPLATAVVCAGRVPWAACPLGLSHALAALDKQERVLVETV
GDLRSSRSSSGGSGSSGLLSFVSPSSGDVVRGSEAVGGALPGRSGHRTPA
EKEKRPAASALEWIAAARMVLAAYSEEINSEEMRGGTPDGVNSEVDSTAG
DRIIELACERHPSLVVSPKGGGGGSLANALLWAGRTRPLVSALVQLTSRG
AVEGTGQVGGALTGPHRAQELLQLTGDYFSPTIDPLQALLVFGIPGRQIA
ARLDSLRRSSLDDARGEESLRRGIPLGSFEAQDSDAFPKGGSGGSVVDGS
PGGDKMGLLLQTAARDYLSRRCAASLARGGDIVAWEEEKLSNARGAPEAW
HAAVASNRALDRAILRYLIGAHLDDLRALEHSNSPNSPKRLGGGVEATGV
GDSSGWFIQPKKTVHGGRGSWADAIFPLLTDQVSREQGGAAEGHLNTITS
LVREVTWRGDLPEGIGSGCKGRGMSPEEASEVVTEARRRLPVTATAQAPT
ALDTGDTTVDREDIDANYDGGDDDERTTVVPWGYGGEGTRISRSPWPWGP
RAVPPSAVGALVALAAALPAAGKLMGGVQVMLQVAAEVVKAAKAEAAAAA
GVAAAAKSGRGTGRHAKQPPRDLSTASMISGTVRLDSNADLSEAFVADRI
QEVSAVAESALLLYITEYCGRDPVLWASVIEYIRHVGDGRMGRAGSGFPA
GGPVSGDSMAAERLVEALLRRCGEELGGRALVGALPEELDLVEC
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