mRNA_H-elongata_contig19207.5318.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig19207.5318.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 512 bits (1319), Expect = 3.960e-159 Identity = 330/622 (53.05%), Postives = 402/622 (64.63%), Query Frame = 1
Query: 34 GALYCNMVNELTVIESAFFGNSALWGGAVATFSSGGQPLTXXXXXXSTDPSSLHRGFDVGTSCS----EQLLPQFDVIMYNGFKVQYLPSSSLTTLGMK-------PVKFVGCNFTFNRAEDDGGAIYSGAGYDIIRESKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSDVTFRGNNYYCAIGEFSYNMTTVR--VGDPSSCRFAEVCSRCITDCESELEDSVTVEDLGNIPICEDVPEGSTTTKRGSTVESLEILPGYFRFSATSLDIRECFYAEACHGGVVAGEYCAAGYEGPYCAVCGNGYAPGYHHTCKSCMKSSRRRAVAGITIVLCIAFVALCFVVSGLISVVKPSPAETFVLSSRAKETLGVWQHRLAKRFPLTIVKIIVVVWQIVTQARGGGWDYRGQYSDVAGVQYPGAYKDFLSIIDMVNLDVGFILSFACIYDTTFYDRLLFATLGPIVVLVLLGGTYAIAWHRNRGSEVALATVRRRHLSVALFVMFVVYGTVSHTVFETFVCDEMEGGESFLRADYSLECTAGRHRVYQVWASLMVIVYPVGIPCVFGWWLVQHRHDLKADPYRHFNPSLRPAADLWEPYKCDRYYYEV 1860
GA++C+ V + T + F NSALWGGAVA FSSGG + S +S R + TS S E L P PVKF+ C F N A +DGGA+YS A +D+IR SK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N++YC GEF + G CRF VCSRC ++C+SELE + + D +P CE+ PEGS TT+RG+T+ +LEILPG++R S TS DIRECF+ +AC GG G YCA GY GPYCAVC GY+PGY TCKSCM S++ A+ + +A A+ +VS L+SVV+ P + S + T WQ R+ + PLT VKI+VVVWQIVTQ YSDVAGV+YPGAY+DFLS++D+VNLD+GFILSFAC+YDT FYDRLL AT+GP++VL LLG TY +A RNR E A+ V+RRHLSV LFVMFV+Y VS+T+FETFVCD ++ G S+LRADYSL C H Y+V+A L V+VYPVGIPCVFGWWL ++RH+LK + R LRPAADLWEPYK YYYEV
Sbjct: 320 GAIFCSSVPQATFKNANFTRNSALWGGAVALFSSGGSASSSSFSSASGS-TSKSREIAILTSGSGYDPEDLTPSLTTXXXXXXXXXXXXXXXXXXXXXXGEEDPSTPVKFLDCLFESNDALEDGGALYSVASFDMIRGSKFFQNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDNDFYCEEGEFGTETLIDKDLFGGADQCRFGRVCSRCASECDSELESAAELVDAETLPTCEEAPEGSRTTRRGATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGTYCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVVALVSRLVSVVEVGPPQQQG-SKGWRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQ-----------YSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQED-RESQAELRPAADLWEPYKPSAYYYEV 927
BLAST of mRNA_H-elongata_contig19207.5318.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 500 bits (1288), Expect = 8.090e-156 Identity = 335/626 (53.51%), Postives = 406/626 (64.86%), Query Frame = 1
Query: 16 AMEGSGGALYCNMVNELTVIESAFFGNSALWGGAVATFSSGGQPLTXXXXXXSTDPSSLHRGFDVGTSCSEQLLPQFDVIMYNGFKVQYLPSSSLTTLGMK-----------PVKFVGCNFTFNRAEDDGGAIYSGAGYDIIRESKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSDVTFRGNNYYCAIGEFSYNMTTVRVGDPSSCRFAEVCSRCITDCESELEDSVTVEDLGNIPICEDVPEGSTTTKRGSTVESLEILPGYFRFSATSLDIRECFYAEACHGGVVAGEYCAAGYEGPYCAVCGNGYAPGYHHTCKSCMKSSRRRAVAGITIVLCIAFVALCFVVSGLISVVKPSPAETFVLSSRAKETLGVWQHRLAKRFPLTIVKIIVVVWQIVTQARGGGWDYRGQYSDVAGVQYPGAYKDFLSIIDMVNLDVGFILSFACIYDTTFYDRLLFATLGPIVVLVLLGGTYAIAWHRNRGSEVALATVRRRHLSVALFVMFVVYGTVSHTVFETFVCDEMEGGESFLRADYSLECTAGRHRVYQVWASLMVIVYPVGIPCVFGWWLVQHRHDLKADPYRHFNPSLRPAADLWEPYKCDRYYYEV 1860
A+EGSGGA+Y + V + T + F GN+A+WGGAVA+FS XXXXXX P KF+ C F N A +DGGAIYS AG+D++++S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++YC G FS T V + CRF VCSRC ++C SELED VTV D +P CE VPEG+ TT RG T+ +LEILPGY+R SATS DIRECFY +AC GG V GEYCAAGY GPYCAVC G++PGY H+CKSCM SRRRA ++ V + +A+ F+ + L+SVV+ +P+ SR ++ VWQ R+ K PLT +KI+VVVWQIVTQ YSDVAGV+YPGAYKDFLS++D+VNLD+GFILS AC+ DT FYDRLL T+ P VVL LLG TY +A+ V+ RHLSVALF+MFV+Y TVS+T+FETFVCD ++ G S+LR+DYSL C H Y+V+A LM++VYPVGIPCVFGWWL +HRH+LK + R L+PAADLWEPYK YYYEV
Sbjct: 324 ALEGSGGAIYSSNVPQATFKNANFDGNAAVWGGAVASFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAPTKFLSCVFEENHASEDGGAIYSVAGFDMVKDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFYCEEGTFS---TEVEIEGEDVCRFGLVCSRCASECASELEDEVTVADPDLLPACEAVPEGAQTTSRGGTLATLEILPGYYRSSATSTDIRECFYEDACEGGKVVGEYCAAGYTGPYCAVCTAGFSPGYFHSCKSCMGDSRRRAFYVVSAVGVLVLLAVVFMAAKLVSVVETTPSSK--APSRWQQKRSVWQARMKKILPLTAIKIVVVVWQIVTQ-----------YSDVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTY-----------LAMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQEG-RERRAVLKPAADLWEPYKPSTYYYEV 921
BLAST of mRNA_H-elongata_contig19207.5318.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 498 bits (1282), Expect = 4.020e-154 Identity = 325/626 (51.92%), Postives = 399/626 (63.74%), Query Frame = 1
Query: 34 GALYCNMVNELTVIESAFFGNSALWGGAVATFSSGGQPLTXXXXXXSTDPSSLHRGFDVGTSCS----EQLLPQFDVIMYNGFKVQYLPSSSLTTLGMK-------PVKFVGCNFTFNRAEDDGGAIYSGAGYDIIRESKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSDVTFRGNNYYCAIGEFSYNMTTVR--VGDPSSCRFAEVCSRCITDCESELEDSVTVEDLGNIPICEDVPEGSTTTKRGSTVESLEILPGYFRFSATSLDIRECFYAEACHGGVVAGEYCAAGYEGPYCAVCGNGYAPGYHHTCKSCMKSSRRRAVAGITIVLCIAFVALCFVVSGLISVVKPSPAETFVL----SSRAKETLGVWQHRLAKRFPLTIVKIIVVVWQIVTQARGGGWDYRGQYSDVAGVQYPGAYKDFLSIIDMVNLDVGFILSFACIYDTTFYDRLLFATLGPIVVLVLLGGTYAIAWHRNRGSEVALATVRRRHLSVALFVMFVVYGTVSHTVFETFVCDEMEGGESFLRADYSLECTAGRHRVYQVWASLMVIVYPVGIPCVFGWWLVQHRHDLKADPYRHFNPSLRPAADLWEPYKCDRYYYEV 1860
GA++C+ V + T + F NSALWGGAVA FSSGG + S S R + TS S E L P VKF+ C F N A +DGGA+YS A +D+IR S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N++YC GEF + G CRF VCSRC ++C SELE + + D +P CE PEGS TT+RG+T+ +LE+LPG++R S TS DIRECF+ +AC GG G YC+ GY GPYCAVC GY+PGY TCKSCM +S++ A+ + +A A+ +VS L+SVV+ P + S + T Q R+ + PLT VKI+VVVWQIVTQ YSDVAG++YPGAY+DFLS++D+VNLD+GFILSFAC+YDT FYDRLL AT+GP++VL LLG TY +A RNR E A+ V+RRHLSV LFVMFV+Y VS+T+FETFVCD ++ G S+LRADYSL C H Y+V+A L V+VYPVGIPC+FGWWL ++RH+LK + R LRPAADLWEPYK YYYEV
Sbjct: 296 GAIFCSSVPQATFKNANFTRNSALWGGAVALFSSGGSASSSSLSSASGSTSES-REIAILTSSSGYDPENLTPSLTXXXXXXXXXXXXXXXXXXXXXXXGEGGPSTTVKFLDCLFESNGASEDGGALYSVASFDVIRGSNFSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDFYCEEGEFGTETLIDKDLFGGADQCRFRRVCSRCASECGSELERTAELVDADTLPTCETAPEGSRTTRRGATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGTYCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSALVFAAAIGLLALAAVMVLVSRLVSVVEVGPRQQXXXXXXGSKGWRRTCSALQARVRQTVPLTAVKIVVVVWQIVTQ-----------YSDVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQED-REGQAELRPAADLWEPYKPSAYYYEV 908
BLAST of mRNA_H-elongata_contig19207.5318.1 vs. uniprot
Match: A0A6H5L874_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L874_9PHAE) HSP 1 Score: 367 bits (941), Expect = 1.200e-114 Identity = 264/517 (51.06%), Postives = 322/517 (62.28%), Query Frame = 1
Query: 10 NHAMEGSGGALYCNMVNELTVIESAFFGNSALWGGAVATFSSGGQPLTXXXXXXSTDPSSLHRGFDVGTSCSEQLLPQFDVIMYNGFKVQYLPSSS------------------LTTLGMKPVKFVGCNFTFNRAEDDGGAIYSGAGYDIIRESKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSDVTFRGNNYYCAIGEFSYNMTTVRVGDPSSCRFAEVCSRCITDCESELEDSVTVEDLGNIPICEDVPEGSTTTKRGSTVESLEILPGYFRFSATSLDIRECFYAEACHGGVVAGEYCAAGYEGPYCAVCGNGYAPGYHHTCKSCMKSSRRRAVAGITIVLCIAFVALCFVVSGLISVVKPSPAETFVLSSRAKETLGVWQHRLAKRFPLTIVKIIVVVWQIVTQARGGGWDYRGQYSDVAGVQYPGAYKDFLSIIDMVNLDVGFILSFACIYDTTFYDRLLFATLGPIVVLVLLGGTYAIAWHRNRGSEVALA 1506
N A+EGSGGA+Y + V + T + F N+A+WGGAVA+FSSG + S G+D E L P V L + P KF+GC F N A +DGGAIYS AG+D+++ES XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++YC G FS T V + CRF VCSRC ++C SEL+D VTV D +P CE VPEG+ TT RG T+ +LEILPGY+R ATS DIRECF+ +AC GG V GEYCA GY GPYCAVC G++ GY H+CKSCM SRRRA ++ V + +A+ F+ + L+SVV+ +P+ SR + VW+ R+ K PLT +KI+VVVWQIVTQ YSDVAGV+YPGAYKDFLS+ID+VNLD+GFILS AC+YDT FYDRLL T+ P VVL LLG TY +A RNR S+ L+
Sbjct: 178 NTALEGSGGAIYSSNVPQATFKNANFTSNAAVWGGAVASFSSGEVASSSSSSTPFRTSGSSGSGYD-----PEDLTPSLTTTAGGATTVTSLSADPDADGSGXXXXXXXXXXXXXXXXXAAPTKFLGCVFGENHASEDGGAIYSVAGFDMVKESTFFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFYCEEGTFS---TEVEIEGEEVCRFGRVCSRCASECGSELQDEVTVADPDLLPACEAVPEGAQTTTRGGTLATLEILPGYYRSLATSTDIRECFFEDACEGGQVVGEYCATGYSGPYCAVCTAGFSRGYFHSCKSCMGDSRRRAFYVVSTVGALVLLAVVFLAAKLVSVVEMTPSRK--APSRWQRKRSVWRARIKKILPLTAIKIVVVVWQIVTQ-----------YSDVAGVEYPGAYKDFLSVIDVVNLDLGFILSLACVYDTDFYDRLLLTTICPAVVLGLLGCTYLVARRRNRRSQQVLS 673
BLAST of mRNA_H-elongata_contig19207.5318.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 344 bits (883), Expect = 3.160e-102 Identity = 198/520 (38.08%), Postives = 271/520 (52.12%), Query Frame = 1
Query: 337 CNFTFNRAEDDGGAIYSGAGYDIIRESKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSDVTFRGNNYYCAIGEFSYNMTTVRVGDPSSCRFAEVCSRCITDCESELEDSVTVEDLGNIPICEDVPEGSTTTKRGS-TVESLEILPGYFRFSATSLDIRECFYAEACHGGVVAGEYCAAGYEGPYCAVCGNGYAPGYHHTCKSCMKSSRRRAVAGITIVLCIAFVALCFVVSGLISVVKPSPAETFVLSSRAKETLGVWQHRLAKRFPLTIVKIIVVVWQIVTQARGGGWDYRGQYSDVAGVQYPGAYKDFLSIIDMVNLDVGFILSFACIYDTTFYDRLLFATLGPIVVLVLLGGTYAIAWHRNRGSEVALATVRRRHLSVALFVMFVVYGTVSHTVFETFVCDEMEGGESFLRADYSLECTAGRHRVYQVWASLMVIVYPVGIPCVFGWWLVQHRHDLK-----------ADPYRHFNPSLRPAADLWEPYKCDRYYYEV 1860
C F N A D GGA+YS AGYD I++ + +++D TF N YYC+ G++ Y +CRF VCS C CE V V D ++PICE G T+ G T+ L +L GY+R SA S ++ +C+ EAC GG +YC GY G YCAVC GYA GY +C C + R A+ + +A V + V++ L+ VV +T +S + L + R+ K PLT +KI+VV WQIVTQ +S V V YP Y+ FL+++++VN D+GF+LS +CI D FY RL F T+GP+VV L TYAI+ RNR S + + +HLS+ALF+ FVVY +VS +F+TFVC+ ++ G ++LRADYSL C+ G H +A LM++VYPVGIP V+ WWL+ +RHDL A H L+P DLW YK RYY+EV
Sbjct: 456 CVFQGNSAVD-GGAMYSAAGYDGIKDCRFEDNLAVGSGGAYLHSGVLVELDRSTFVGNRARDAGLAVQSLGIAGNITDTTFESNTYYCSSGQYGYEYEIGEDEVSGTCRFGVVCSSCAASCEDNPGSVVVVNDA-HVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGGTDVSQYCQEGYRGAYCAVCDEGYASGYQFSCSICDGENLRSAIGTSVALFFVALVGIALVIADLVRVVDEVEPDT---ASTWGKRLTSCRDRIVKAVPLTSIKIVVVAWQIVTQ-----------FSSVVNVVYPDIYESFLAVLNVVNFDLGFLLSVSCIVDVNFYGRLFFTTVGPLVVFGGLAATYAISRSRNRHSPAGMQAAKSKHLSIALFISFVVYSSVSFNIFQTFVCETLDDGVTYLRADYSLTCSTGVHTAMMAYAGLMILVYPVGIPTVYSWWLLSNRHDLVKVGTSGNCLGGAPRLDH----LQPMRDLWSSYKPRRYYFEV 955
BLAST of mRNA_H-elongata_contig19207.5318.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 331 bits (849), Expect = 6.740e-98 Identity = 188/433 (43.42%), Postives = 255/433 (58.89%), Query Frame = 1
Query: 568 DVTFRGNNYYCAIGEFSYNMTTVRVGDPSSCRFAEVCSRCITDCESELEDSVTVEDLGNIPICEDVPEGSTTTKRGSTVESLEILPGYFRFSATSLDIRECFYAEACHGGVVAGEYCAAGYEGPYCAVCGNGYAPGYHHTCKSCMKSSRRRAVAGITIVLCIAFVALCFVVSGLISVVKPSPAETFVLSSRA-KETLGVWQHRLAKRFPLTIVKIIVVVWQIVTQARGGGWDYRGQYSDVAGVQYPGAYKDFLSIIDMVNLDVGFILSFACIYDTTFYDRLLFATLGPIVVLVLLGGTYAIAWHRNRGSEVALATVRRRHLSVALFVMFVVYGTVSHTVFETFVCDEMEGGESFLRADYSLECTAGRHRVYQVWASLMVIVYPVGIPCVFGWWLVQHRHDL-KADPYRHFNPSLRPAADLWEPYKCDRYYYEV 1860
+V F N C GE +Y+ + + SCRF C+RC DC++ + SVT+ D IP+C + EG+ + G+TV +L++ GY+R SA S + EC+ AC GG YCA GYEGPYC+VC +GYAPG + C C +S AV V + L+ VV + + +R K L + + FPLT VKI+VV WQI+TQ + +AG YP Y+DFL+ + VNLD+GFILS++C+ T F+DRLL AT+GP+VVL LL T+ + RN SE A+ V+ +HLS ALFVMF +Y +VS TVF+TFVCD ++ G S+LRADYSL C R+ ++ +A++MV VYP+GIP F W L +R DL KAD R N L+P DLWE YK RYYYE+
Sbjct: 509 NVAFASNTLNCPPGENAYD----KEAEDDSCRFELACARCSADCDA-IPSSVTMAD-STIPVCVESMEGTKASSSGTTVATLDLQEGYYRTSAESQVVVECYLTSACAGGTDPKNYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAVGVAXXXXXXXXXXXAVVAADLVRVVD---GDDSIKDARTLKGRLSRFHAFVVTAFPLTTVKIVVVAWQIITQ-----------FGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRDRLAN--LQPLGDLWEAYKPSRYYYEI 919
BLAST of mRNA_H-elongata_contig19207.5318.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 277 bits (708), Expect = 7.180e-78 Identity = 178/518 (34.36%), Postives = 259/518 (50.00%), Query Frame = 1
Query: 319 PVKFVGCNFTFNRAEDDGGAIYSGAGYDIIRESKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSDVTFRGNNYYCAIGEFSYNMTTVRVGDPSSCRFAEVCSRCITDCESELEDSVTVEDLGNIPICEDVPEGSTTTKRGSTVESLEILPGYFRFSATSLDIRECFYAEACHGGVV-AGEYCAAGYEGPYCAVCGNGYAPGYHHTCKSCMKSSRRRAVAGITIVLCIAFVALCFVVSGLISVV--KPSPAETFVLSSRAKETLGVWQHRLAKRFPLTIVKIIVVVWQIVTQARGGGWDYRGQYSDVAGVQYPGAYKDFLSIIDMVNLDVGFILSFACIYDTTFYDRLLFATLGPIVVLVLLGGTYAIAWHRNRGSEVALATVRRRHLSVALFVMFVVYGTVSHTVFETFVCDEMEGGESFLRADYSLECTAGRHRVYQVWASLMVIVYPVGIPCVFGWWLVQHRHDLKADPY-RHFNPSLRPAADLWEPYKCDRYYYEV 1860
P F C FTFNRA GGA+ S +G D+ E +S+ TF GN + CA F N T+ GD E CS C T C+ ++ V +P+C DV S + T+E+L I PGY+R + +S ++ C+ +AC GG+ A EYC GYEGPYCA+C + Y+ TC C + GI + +A + L F V ++S V + P ++ K L PL +KI+VV WQIVTQ ++ A V YP Y+ FL+ +D+ N D+ ++LS C+ D F+DRLL +T+GPI+ L+ L TY NRG+ L V RH+S+ L ++F+VY VS VF+TF CD++EGG +LRADY +EC + +H+ ++V+A M+++YPVGIP +G L++ R L+ DP R P + ++LW+PY+ YYYEV
Sbjct: 413 PTTFSRCRFTFNRATATGGAVDSASGQDLF-EDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTF-LNYTS---GDALD----EACSGCQTTCDGCVQPPV-------VPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRA-----GGILLATALAVIGL-FTVVAVVSYVAWRVDPNTGCAMAGHLKRYL-----------PLQTLKILVVAWQIVTQ-----------FTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEV 886
BLAST of mRNA_H-elongata_contig19207.5318.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI) HSP 1 Score: 274 bits (700), Expect = 1.130e-76 Identity = 198/623 (31.78%), Postives = 285/623 (45.75%), Query Frame = 1
Query: 7 LNHAMEGSGGALYCNMVNELTVIESAFFGNSALWGGAVATFSSG--GQPLTXXXXXXSTDPSSLHRGFDVGTSCSEQLLPQFDVIMYNGFKVQYLPSSSLTTLGMKPVKFVGCNFTFNRAEDDGGAIYSGAGYDIIRESKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSDVTFRGNNYYCAIGEFSYNMTTVRVGDPSSCRFAEVCSRCITDCESELEDSVTVEDLGNIPICEDVPEGSTTTKRGSTVESLEILPGYFRFSATSLDIRECFYAEACHGGVVAGE--YCAAGYEGPYCAVCGNGYAPGYHHTCKSCMKSSRRRAVAGITIVLCIAFVALCFVVSGLISVVKPSPAETFVLSSRAKETLGVWQHRLAK-RFPLTIVKIIVVVWQIVTQARGGGWDYRGQYSDVAGVQYPGAYKDFLSIIDMVNLDVGFILSFACIYDTTFYDRLLFATLGPIVVLVLLGGTYAIAWHRNRGSEVALATVRRRHLSVALFVMFVVYGTVSHTVFETFVCDEMEGGESFLRADYSLECTAGRHRVYQVWASLMVIVYPVGIPCVFGWWLVQHRHDLKADPYRHFNPSLRPAADLWEPYKCDRYYYEV 1860
+++ EGSGGA+ + L + + F GNSA G S+ G L +T H G V + S D + +G+ P F GC F N A+ GGAI S +G D I S + + FR N C G F V + R+ VC C +D +T+ +P C + E + + +++E + I PGY+R + T+ + C+ A+AC GG+ GE YC GY GPYCA+C Y C C SS G+ V +A V + +++S+ + L K + +KI+VVVWQI+TQ +SDVA V YP Y+ FL +ID++N D+G+++S C+ D F+D LL AT+GPI+V+ +LG TYA A +RNRGS+ A+A V R+H+S L V F+VY +VS TVF FVCD + S+LRADYS++C++ +HR Q++A MV++YPVGIP +G L R LK R +P + + LWEPY RYY EV
Sbjct: 354 VDNTCEGSGGAIKTSGAVSLALEDVVFTGNSAQSRGGALYISNTAVGPTLVGLTFTGNT----AHTGGAVYVTASG-----VDAVFGDGY----------------PTTFAGCYFADNFADLSGGAIDSSSGDDSIESSDFISNKAVIGGALRLAGNDVSIKYCTFDGNAAGTVDGGPAVSNVGDLDVWNSVFRRNYIECPPGSF------VDYYESEGGRYEAVCDGC-----PAADDGITMGVENLVPTCTETLENTRSDGANTSIEDIRIDPGYWRATTTTTTVLACYNADACLGGIT-GEAGYCREGYYGPYCAICTENYGRTMAFECTKC--SSGEGVAVGVIFVSALA--------------VGGAALVAYLVSNEREGXXXXXLIVLVKDKVSFRSLKIVVVVWQILTQ-----------FSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSDEAIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREALKDGSCRQAHPQAKTISALWEPYTPKRYYNEV 912
BLAST of mRNA_H-elongata_contig19207.5318.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 274 bits (701), Expect = 3.870e-76 Identity = 201/628 (32.01%), Postives = 293/628 (46.66%), Query Frame = 1
Query: 7 LNHAMEGSGGALYC--NMVNELTVIESAFFGNSA-LWGGAVATFSSGGQPLTXXXXXXSTDPSSLHRGFDVGTSCSEQLLPQFDVIMYNGFKVQYLPSSSLTTLGMKPVKFVGCNFTFNRAEDDGGAIYSGAGYDIIRESKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSDVTFRGNNYYCAIGEF-SYNMTTVRVGDPSSCRFAEVCSRCITDCESELEDSVTVEDLGNIPICEDVPEGSTTTKRGSTVESLEILPGYFRFSATSLDIRECFYAEACHGGVVA-GEYCAAGYEGPYCAVCGNGYAPGYHHTCKSCMKSSRRRAVAGI--TIVLCIAFVALCFVVSGLISVVKPSPAETFVLSSRAKETLGVWQHRLAKRFPLTIVKIIVVVWQIVTQARGGGWDYRGQYSDVAGVQYPGAYKDFLSIIDMVNLDVGFILSFACIYDTTFYDRLLFATLGPIVVLVLLGGTYAIAWHRNRGSEVALATVRRRHLSVALFVMFVVYGTVSHTVFETFVCDEMEGGESFLRADYSLECTAGRHRVYQVWASLMVIVYPVGIPCVFGWWLVQHRHDLK---ADPYRHFNPSLRPAADLWEPYKCDRYYYEV 1860
+N+ +GGAL + + +F GN+A + GGAV +G P+ S +S G V T S L D+ N P F C+F NRA GGAI S AG D S S+ ++TF GN + C G + YN + G+P + C C T C+ + P C DV E T+ T+E L + GY+R S +S ++ C+ ++AC GGV YC GYEGPYCAVC +GY C C + R A+A + +VLC+AF + +SG + V+ RL + PL VKI++V WQI+TQ ++ VA V YP YK FL +D+ N D+ ++LS CI+D F+DRLL +T+ P++ L+ L GTYA A NRG +L + +H+S+ L + F++Y +VS T+F+ FVC+E+E G ++LRADY+++C + +H+ +QV+A MV+VY VGIP ++ + L + RH LK AD R +DLW+PYK +YYEV
Sbjct: 564 VNNTCGANGGALALLGGLAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFIS---NSAQVGGAVSTVGSGNLKENADISPPN------------------PTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLL-SVENITFSGNVFDCDPGMYLDYNAS----GNP----YEAACGGCETACDGCFFEPPVP------PTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVA-----------------RLGQYIPLQSVKIVIVAWQILTQ-----------FTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHAD--REQTARTTSTSDLWKPYKPSVFYYEV 1125
BLAST of mRNA_H-elongata_contig19207.5318.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE) HSP 1 Score: 272 bits (695), Expect = 1.560e-75 Identity = 180/525 (34.29%), Postives = 259/525 (49.33%), Query Frame = 1
Query: 319 PVKFVGCNFTFNRAEDDGGAIYSGAGYDIIRESKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSDVTFRGNNYYCAIGEFSYNMTTVRVGDPSSCRFAEVCSRCITDCESELEDSVTVEDLGNIPICEDVPEGSTTTKRGSTVESLEILPGYFRFSATSLDIRECFYAEACHGGVVAGEY-CAAGYEGPYCAVCGNGYAPGYHHTCKSCMKSSRRRAVAGITIVLCIAFVALCFVVSGLISVVKPSPAE----TFVLSSRAKETLGVWQHRLAKRFPLTIVKIIVVVWQIVTQARGGGWDYRGQYSDVAGVQYPGAYKDFLSIIDMVNLDVGFILSFACIYDTT--FYDRLLFATLGPIVVLVLLGGTYAIAWHRNR----GSEVALATVRRRHLSVALFVMFVVYGTVSHTVFETFVCDEMEGGESFLRADYSLECTAGRHRVYQVWASLMVIVYPVGIPCVFGWWLVQHRHDLKADPYRHFNPSLRPAADLWEPYKCDRYYYEV 1860
P FVGC F N A + GG + S G + S ++SD F GN ++C GEF N GD S R+ VC C E S +V++ P C + + + + G ++E+L + GY+R S +SL I C+ EAC GG + C GY+GPYCAVC +GYA HTC C SSRR FVV+ I+VV ++S E RL+ PL KII+VVWQI+TQ ++ A + +P Y+DF++ +D+VN D+G +++ C D F+DRLL +TLGP++V+ L TYA+A RN GS+ + +R +HLS L V F+VY +VS TVF+ F CD+++ G ++LRADY + CT+ +H QV+A+ M+ +YPVGIP ++ + L+ HR D+ DP S + ADLWEPY+ +R+YYEV
Sbjct: 540 PASFVGCRFMSNAATETGGGVESAFGQENFVSSHFQDNYADVGGALQLGGKTNVDGCAFVANSASSRGLAIAAVGFV---NISDTLFEGNTFFCQAGEFVENKEQEE-GD--SGRYDTVCFDCPERSECY---SCSVQEAAGRPTCSVALDNTVSEEAGVSLETLSMSRGYWRASNSSLIILACYNPEACLGGQTGVDNSCDNGYQGPYCAVCESGYASSLAHTCTQC-SSSRRNG----------------FVVAAAIAVVXXXXXXXXXCAHLISGEVSEQ-SCLHRRLSAMLPLQSFKIIIVVWQILTQ-----------FASAANISFPDVYQDFINALDVVNFDLGSLVASGCWADINVDFHDRLLVSTLGPLLVVGGLASTYAVAQRRNSSASGGSQAGVEAIRHKHLSAFLLVTFLVYSSVSATVFQMFACDKLDDGHTYLRADYRILCTSAKHEALQVYAAFMIALYPVGIPLLYAY-LLHHRRDVLMDPTAD-KASAQSTADLWEPYRPERFYYEV 1024 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19207.5318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig19207.5318.1 >prot_H-elongata_contig19207.5318.1 ID=prot_H-elongata_contig19207.5318.1|Name=mRNA_H-elongata_contig19207.5318.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=616bp MEGSGGALYCNMVNELTVIESAFFGNSALWGGAVATFSSGGQPLTTTTTTback to top mRNA from alignment at H-elongata_contig19207:1310..6948+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig19207.5318.1 ID=mRNA_H-elongata_contig19207.5318.1|Name=mRNA_H-elongata_contig19207.5318.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5639bp|location=Sequence derived from alignment at H-elongata_contig19207:1310..6948+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig19207:1310..6948+ >mRNA_H-elongata_contig19207.5318.1 ID=mRNA_H-elongata_contig19207.5318.1|Name=mRNA_H-elongata_contig19207.5318.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3696bp|location=Sequence derived from alignment at H-elongata_contig19207:1310..6948+ (Himanthalia elongata Himel1 dioecious)back to top |