prot_H-elongata_contig19192.5311.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig19192.5311.1
Unique Nameprot_H-elongata_contig19192.5311.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length269
Homology
BLAST of mRNA_H-elongata_contig19192.5311.1 vs. uniprot
Match: A0A6H5JI84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI84_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 2.590e-26
Identity = 112/296 (37.84%), Postives = 153/296 (51.69%), Query Frame = 0
Query:    5 GGALPPCERCIILSEAVQDARARAKLLERLVEQAEEL---RLNQADQLSQRT-SADQAKAETITGDVDSMTHVAGSKGSQAVDRREASGAPAAVQELTGNGAGKEVKSAREERGVAGGGSSSEE---------------------------LLSAAEAVWRISEIARDALEKELDRRGEALASAKRASKEFKEAFSKQLQELSSARATLRSQQAELERWKSGAEKSSAKEKDTRRALESARIVTGDAARSRSEREAKALRVEADDLKQKVSSLRTRLACVQGRRQAELETANKKIE 269
            G  LP CERC++LSE+++  R RA+  ERL+E +E+L       A     R  SA Q      T D      +A   G+ A D    +G  A V  +   G  +      E   V       EE                               AE VWR+SE+AR+ L+ EL+R+ EAL++A + ++E KEA SKQ QE++     +R+Q+ E E+WK+ AE+S AKEKDTRRA+ESA++   D  R RS RE KAL  E   L +K+++LR+RL  VQ RR AE E A KK E
Sbjct:  648 GDILPACERCVVLSESLESLRERARAQERLLEHSEKLLTAATTTAASFDARIHSAGQRDESCPTADAGGDGPIALGPGASA-DPTTPTGVAADVAPV---GQVEPAIRPAENEDVPRDEQQPEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEVWRVSEMARNVLQGELERKDEALSAATKTARESKEALSKQRQEVARLNDAVRNQEKETEKWKADAERSIAKEKDTRRAMESAKVAAADVLR-RSGRERKALMGEVHTLNEKITALRSRLGGVQTRRNAECELAAKKTE 938          
BLAST of mRNA_H-elongata_contig19192.5311.1 vs. uniprot
Match: D7FL34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL34_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 2.290e-12
Identity = 82/242 (33.88%), Postives = 119/242 (49.17%), Query Frame = 0
Query:    6 GALPP-CERCIILSEAVQDARARAKLLERLVEQAEEL---RLNQADQLSQRT-SADQAKAETITGDVDSMTHVAGSKGSQAVDRRE----ASGAPAAVQELTGNGAGKEVKSAREERGVAGGGSSSEELL-------------------SAAEAVWRISEIARDALEKELDRRGEALASAKRASKEFKEAFSKQLQELSSARATLRSQQAELERWKSGAEKSSAKEKDTRRALESARIVTGD 219
            G +PP CERC++LSE+++  R R +  ERL+E +E+L       A     R  SA Q      T D  S   +A   G+ A         A  +P    E     AG E     E++   G    +                       +AAE VWR+SE+AR+AL+ EL+R+ EAL++A + ++E KEA SKQ              + E E+W++ AE+S AKEKDTRRA+ESA++  G+
Sbjct:  718 GDIPPACERCVVLSESLESLRERTRAQERLLEHSEKLLTVATTTAAPFDTRVRSAGQRDESCPTADAGSNGPIALGPGASADPAAPVGVAADVSPVGEVEPAIRPAGNEDVPRVEQQPEEGSKHHASXXXXXXXXXXXXXXXXXXXXXXAAAEEVWRVSEMARNALQGELERKDEALSAATKTARESKEALSKQ--------------EKETEKWQADAERSIAKEKDTRRAMESAKVGQGE 945          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig19192.5311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JI84_9PHAE2.590e-2637.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL34_ECTSI2.290e-1233.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..185
NoneNo IPR availableCOILSCoilCoilcoord: 222..256
NoneNo IPR availableCOILSCoilCoilcoord: 21..51
NoneNo IPR availableCOILSCoilCoilcoord: 140..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig19192contigH-elongata_contig19192:845..2522 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig19192.5311.1mRNA_H-elongata_contig19192.5311.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig19192 845..2522 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig19192.5311.1 ID=prot_H-elongata_contig19192.5311.1|Name=mRNA_H-elongata_contig19192.5311.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=269bp
MHTSGGALPPCERCIILSEAVQDARARAKLLERLVEQAEELRLNQADQLS
QRTSADQAKAETITGDVDSMTHVAGSKGSQAVDRREASGAPAAVQELTGN
GAGKEVKSAREERGVAGGGSSSEELLSAAEAVWRISEIARDALEKELDRR
GEALASAKRASKEFKEAFSKQLQELSSARATLRSQQAELERWKSGAEKSS
AKEKDTRRALESARIVTGDAARSRSEREAKALRVEADDLKQKVSSLRTRL
ACVQGRRQAELETANKKIE
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