prot_H-elongata_contig191701.5303.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig191701.5303.1
Unique Nameprot_H-elongata_contig191701.5303.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length66
Homology
BLAST of mRNA_H-elongata_contig191701.5303.1 vs. uniprot
Match: D7FVF3_ECTSI (GBF1, ArfGEF protein of the BIG/GBF subfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVF3_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 4.930e-33
Identity = 60/66 (90.91%), Postives = 64/66 (96.97%), Query Frame = 0
Query:    1 SVHLRVLDGASYRPEQQELALESLLEFTREPALMLDVYINYDCDVQCTNLFESICHTLSTHALPRD 66
            SVHLRVLDG+SY PEQQELALESLLEFTREPALM DVYINYDCDVQCTNLFE+ICH+LS+HALPRD
Sbjct:  492 SVHLRVLDGSSYGPEQQELALESLLEFTREPALMTDVYINYDCDVQCTNLFETICHSLSSHALPRD 557          
BLAST of mRNA_H-elongata_contig191701.5303.1 vs. uniprot
Match: A0A6H5JJL6_9PHAE (SEC7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJL6_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 4.930e-33
Identity = 60/66 (90.91%), Postives = 64/66 (96.97%), Query Frame = 0
Query:    1 SVHLRVLDGASYRPEQQELALESLLEFTREPALMLDVYINYDCDVQCTNLFESICHTLSTHALPRD 66
            SVHLRVLDG+SY PEQQELALESLLEFTREPALM DVYINYDCDVQCTNLFE+ICH+LS+HALPRD
Sbjct:  492 SVHLRVLDGSSYGPEQQELALESLLEFTREPALMTDVYINYDCDVQCTNLFETICHSLSSHALPRD 557          
BLAST of mRNA_H-elongata_contig191701.5303.1 vs. uniprot
Match: A0A6A4ZTC0_9STRA (Sec7_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZTC0_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 5.850e-22
Identity = 41/59 (69.49%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 SVHLRVLDGASYRPEQQELALESLLEFTREPALMLDVYINYDCDVQCTNLFESICHTLS 59
            SVH+R++D  +   EQ+ELALESLLEF REPALMLD+YINYDCDV CTNLFE +C  L+
Sbjct:   30 SVHMRIMDSPTCSDEQKELALESLLEFCREPALMLDLYINYDCDVHCTNLFEVLCTALA 88          
BLAST of mRNA_H-elongata_contig191701.5303.1 vs. uniprot
Match: A0A7S1GAE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAE2_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.490e-21
Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 0
Query:    1 SVHLRVLDGASYRPEQQELALESLLEFTREPALMLDVYINYDCDVQCTNLFESICHTLSTHALPRD 66
            SVHLR+ D  S   EQ+ELA ESL+EF REPALMLD+YINYDCDV CTNLFE++C  L  +A+P D
Sbjct:  144 SVHLRIADSKSAADEQRELAFESLVEFAREPALMLDLYINYDCDVACTNLFETLCKCLCRNAVPED 209          
BLAST of mRNA_H-elongata_contig191701.5303.1 vs. uniprot
Match: A0A2D4CF02_PYTIN (SEC7 domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF02_PYTIN)

HSP 1 Score: 92.4 bits (228), Expect = 2.480e-20
Identity = 41/59 (69.49%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 SVHLRVLDGASYRPEQQELALESLLEFTREPALMLDVYINYDCDVQCTNLFESICHTLS 59
            SVHLR++D  S   EQ+ELALESLLEF REPA+MLD+Y+NYDCDV CTNLFE +C +L+
Sbjct:  328 SVHLRIIDSPSCSDEQKELALESLLEFCREPAMMLDLYVNYDCDVHCTNLFEVLCRSLA 386          
BLAST of mRNA_H-elongata_contig191701.5303.1 vs. uniprot
Match: A0A6A3JS86_9STRA (SEC7 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JS86_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.490e-20
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 SVHLRVLDGASYRPEQQELALESLLEFTREPALMLDVYINYDCDVQCTNLFESICHTLS 59
            SVH+R++D  S   EQ+ELALESLLEF REPALMLD+YINYDCDV CTNLFE +C +L+
Sbjct:  358 SVHMRIIDSPSCSDEQKELALESLLEFCREPALMLDLYINYDCDVHCTNLFEVLCKSLA 416          
BLAST of mRNA_H-elongata_contig191701.5303.1 vs. uniprot
Match: A0A3F2RJI9_9STRA (SEC7 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJI9_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.490e-20
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 SVHLRVLDGASYRPEQQELALESLLEFTREPALMLDVYINYDCDVQCTNLFESICHTLS 59
            SVH+R++D  S   EQ+ELALESLLEF REPALMLD+YINYDCDV CTNLFE +C +L+
Sbjct:  338 SVHMRIIDSRSCSDEQKELALESLLEFCREPALMLDLYINYDCDVHCTNLFEVLCKSLA 396          
BLAST of mRNA_H-elongata_contig191701.5303.1 vs. uniprot
Match: A0A3M6VFJ1_9STRA (SEC7 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFJ1_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.490e-20
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 SVHLRVLDGASYRPEQQELALESLLEFTREPALMLDVYINYDCDVQCTNLFESICHTLS 59
            SVH+R++D  S   EQ+ELALESLLEF REPALMLD+YINYDCDV CTNLFE +C +L+
Sbjct:  368 SVHMRIIDSPSCSDEQKELALESLLEFCREPALMLDLYINYDCDVHCTNLFEVLCKSLA 426          
BLAST of mRNA_H-elongata_contig191701.5303.1 vs. uniprot
Match: A0A225WXV2_9STRA (SEC7 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXV2_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.490e-20
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 SVHLRVLDGASYRPEQQELALESLLEFTREPALMLDVYINYDCDVQCTNLFESICHTLS 59
            SVH+R++D  S   EQ+ELALESLLEF REPALMLD+YINYDCDV CTNLFE +C +L+
Sbjct:  361 SVHMRIIDSPSCSDEQKELALESLLEFCREPALMLDLYINYDCDVHCTNLFEVLCKSLA 419          
BLAST of mRNA_H-elongata_contig191701.5303.1 vs. uniprot
Match: H3GPL3_PHYRM (SEC7 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GPL3_PHYRM)

HSP 1 Score: 92.4 bits (228), Expect = 2.490e-20
Identity = 42/59 (71.19%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 SVHLRVLDGASYRPEQQELALESLLEFTREPALMLDVYINYDCDVQCTNLFESICHTLS 59
            SVH+R++D  S   EQ+ELALESLLEF REPALMLD+YINYDCDV CTNLFE +C +L+
Sbjct:  362 SVHMRIIDSPSCSDEQKELALESLLEFCREPALMLDLYINYDCDVHCTNLFEVLCKSLA 420          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig191701.5303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVF3_ECTSI4.930e-3390.91GBF1, ArfGEF protein of the BIG/GBF subfamily n=1 ... [more]
A0A6H5JJL6_9PHAE4.930e-3390.91SEC7 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6A4ZTC0_9STRA5.850e-2269.49Sec7_N domain-containing protein (Fragment) n=1 Ta... [more]
A0A7S1GAE2_9STRA1.490e-2166.67Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A2D4CF02_PYTIN2.480e-2069.49SEC7 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6A3JS86_9STRA2.490e-2071.19SEC7 domain-containing protein n=4 Tax=Phytophthor... [more]
A0A3F2RJI9_9STRA2.490e-2071.19SEC7 domain-containing protein n=3 Tax=Phytophthor... [more]
A0A3M6VFJ1_9STRA2.490e-2071.19SEC7 domain-containing protein n=1 Tax=Peronospora... [more]
A0A225WXV2_9STRA2.490e-2071.19SEC7 domain-containing protein n=1 Tax=Phytophthor... [more]
H3GPL3_PHYRM2.490e-2071.19SEC7 domain-containing protein n=3 Tax=Phytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032691Guanine nucleotide exchange factor, N-terminalPFAMPF12783Sec7_Ncoord: 6..50
e-value: 1.1E-8
score: 35.2
NoneNo IPR availablePANTHERPTHR10663GUANYL-NUCLEOTIDE EXCHANGE FACTORcoord: 4..64
NoneNo IPR availablePANTHERPTHR10663:SF316GOLGI-SPECIFIC BREFELDIN A-RESISTANCE GUANINE NUCLEOTIDE EXCHANGE FACTOR 1coord: 4..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig191701contigH-elongata_contig191701:780..977 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig191701.5303.1mRNA_H-elongata_contig191701.5303.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig191701 780..977 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig191701.5303.1 ID=prot_H-elongata_contig191701.5303.1|Name=mRNA_H-elongata_contig191701.5303.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp
SVHLRVLDGASYRPEQQELALESLLEFTREPALMLDVYINYDCDVQCTNL
FESICHTLSTHALPRD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032691Sec7_N