prot_H-elongata_contig191193.5282.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig191193.5282.1
Unique Nameprot_H-elongata_contig191193.5282.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length65
Homology
BLAST of mRNA_H-elongata_contig191193.5282.1 vs. uniprot
Match: A0A6H5JEA6_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA6_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.050e-21
Identity = 47/61 (77.05%), Postives = 53/61 (86.89%), Query Frame = 0
Query:    5 KAGESLNILQDLEPDFVVLYDPDAAFVRKLEAYQATRSRERHPLAVYFMLYAESLEEQRLI 65
            +A ESLNILQDLEPDFVVLYDPDAAFVR LEAYQA R+ +R PL VYFMLY +S+EEQR +
Sbjct:  864 QARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRTLDRPPLVVYFMLYEQSVEEQRYL 924          
BLAST of mRNA_H-elongata_contig191193.5282.1 vs. uniprot
Match: D7FH45_ECTSI (ERCC4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH45_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.960e-21
Identity = 47/61 (77.05%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    5 KAGESLNILQDLEPDFVVLYDPDAAFVRKLEAYQATRSRERHPLAVYFMLYAESLEEQRLI 65
            +A ESLNILQDLEPDFVVLYDPDAAFVR LEAYQA R  +R PL VYFMLY +S+EEQR +
Sbjct:  773 QARESLNILQDLEPDFVVLYDPDAAFVRTLEAYQAGRPLDRPPLVVYFMLYEQSVEEQRYL 833          
BLAST of mRNA_H-elongata_contig191193.5282.1 vs. uniprot
Match: A4S158_OSTLU (ERCC4 domain-containing protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S158_OSTLU)

HSP 1 Score: 66.6 bits (161), Expect = 2.820e-11
Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 0
Query:   10 LNILQDLEPDFVVLYDPDAAFVRKLEAYQATRSRERHPLAVYFMLYAESLEEQRLI 65
            LN+L  ++P FVV+YDPDA+F+R+LE YQATR     P+ VYF++Y  SLEEQ+ +
Sbjct:  619 LNLLNRIQPSFVVMYDPDASFIRELEVYQATRPDV--PVKVYFLVYDTSLEEQKYL 672          
BLAST of mRNA_H-elongata_contig191193.5282.1 vs. uniprot
Match: UPI001C8225D8 (uncharacterized protein n=1 Tax=Scheffersomyces spartinae TaxID=45513 RepID=UPI001C8225D8)

HSP 1 Score: 65.9 bits (159), Expect = 5.270e-11
Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    4 DKAGESLNILQDLEPDFVVLYDPDAAFVRKLEAYQATRSRERHPLAVYFMLYAESLEEQR 63
            D+ G+SL  LQ LEP ++++Y+PD +F+R++EAYQA    E HP   YFM Y  S+EEQ+
Sbjct:  736 DRDGDSL--LQALEPSYIIMYEPDLSFIRRVEAYQAIN--EEHPAKTYFMYYGNSVEEQK 791          
BLAST of mRNA_H-elongata_contig191193.5282.1 vs. uniprot
Match: A0A067CU23_SAPPC (ERCC4 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CU23_SAPPC)

HSP 1 Score: 64.7 bits (156), Expect = 1.340e-10
Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    1 CRLDKAGESLNILQDLEPDFVVLYDPDAAFVRKLEAYQATRSRERHPLAVYFMLYAESLEEQ 62
            C   +A     +L DL+P+ VVLYDPD AF+R+LE Y A  + +  PL+VYFM+Y ES E+Q
Sbjct:  503 CTYAQAKRCATLLHDLQPEHVVLYDPDVAFIRELEVYHAHYADD--PLSVYFMVYDESAEQQ 562          
BLAST of mRNA_H-elongata_contig191193.5282.1 vs. uniprot
Match: A0A0P1BF91_9BASI (Histidine--tRNA ligase n=1 Tax=Ceraceosorus bombacis TaxID=401625 RepID=A0A0P1BF91_9BASI)

HSP 1 Score: 64.7 bits (156), Expect = 1.360e-10
Identity = 32/55 (58.18%), Postives = 44/55 (80.00%), Query Frame = 0
Query:   11 NILQDLEPDFVVLYDPDAAFVRKLEAYQATRSRERHPLAVYFMLYAESLEEQRLI 65
            N+LQ+L+P FVVLYDP+ AFVR+LE Y+A  S   + + VYF++YAES+EEQR +
Sbjct: 1246 NMLQELKPRFVVLYDPNPAFVRRLECYRA--SPITNAVRVYFLMYAESVEEQRYL 1298          
BLAST of mRNA_H-elongata_contig191193.5282.1 vs. uniprot
Match: A0A7S0KJP7_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KJP7_9CHLO)

HSP 1 Score: 64.3 bits (155), Expect = 1.840e-10
Identity = 30/56 (53.57%), Postives = 41/56 (73.21%), Query Frame = 0
Query:   10 LNILQDLEPDFVVLYDPDAAFVRKLEAYQATRSRERHPLAVYFMLYAESLEEQRLI 65
            +N+L  ++P FVV+YDPDAAF+R+LE Y+A       PL VYFM+Y  SLEEQ+ +
Sbjct:  660 VNVLNHIQPSFVVMYDPDAAFIRELEVYKAQHPDA--PLKVYFMVYDTSLEEQKYL 713          
BLAST of mRNA_H-elongata_contig191193.5282.1 vs. uniprot
Match: A0A316VRW7_9BASI (ERCC4 domain-containing protein n=1 Tax=Ceraceosorus guamensis TaxID=1522189 RepID=A0A316VRW7_9BASI)

HSP 1 Score: 64.3 bits (155), Expect = 1.840e-10
Identity = 31/55 (56.36%), Postives = 44/55 (80.00%), Query Frame = 0
Query:   11 NILQDLEPDFVVLYDPDAAFVRKLEAYQATRSRERHPLAVYFMLYAESLEEQRLI 65
            N+LQ+L+P F+VLYDP+ AFVR+LE Y+A  S   + + VYF++YAES+EEQR +
Sbjct:  780 NMLQELKPRFIVLYDPNPAFVRRLECYRA--SPIANAVRVYFLMYAESVEEQRYL 832          
BLAST of mRNA_H-elongata_contig191193.5282.1 vs. uniprot
Match: A0A316U2Q6_9BASI (ERCC4 domain-containing protein n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316U2Q6_9BASI)

HSP 1 Score: 63.9 bits (154), Expect = 2.510e-10
Identity = 29/54 (53.70%), Postives = 42/54 (77.78%), Query Frame = 0
Query:   12 ILQDLEPDFVVLYDPDAAFVRKLEAYQATRSRERHPLAVYFMLYAESLEEQRLI 65
            +LQ+L P F+++YDPDAAFVR++E Y++T +       VYF+LYAES+EEQR +
Sbjct:  725 VLQELRPRFIIMYDPDAAFVRRIEMYRSTTAGVNP--RVYFLLYAESIEEQRYL 776          
BLAST of mRNA_H-elongata_contig191193.5282.1 vs. uniprot
Match: W4GRV4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GRV4_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 4.640e-10
Identity = 29/67 (43.28%), Postives = 41/67 (61.19%), Query Frame = 0
Query:    1 CRLDKAGESLNILQDLEPDFVVLYDPDAAFVRKLEAYQATRSR-----ERHPLAVYFMLYAESLEEQ 62
            C   +A +  N+L DL P  +VLYDPD  F+R+LE + A  S      ++HP+ VYFM+Y  S E+Q
Sbjct:  518 CTYAEADKLPNLLDDLHPSHIVLYDPDVGFIRQLEVFNACNSAHDSRGQQHPVQVYFMVYENSAEQQ 584          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig191193.5282.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEA6_9PHAE1.050e-2177.05ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FH45_ECTSI1.960e-2177.05ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
A4S158_OSTLU2.820e-1155.36ERCC4 domain-containing protein n=2 Tax=Ostreococc... [more]
UPI001C8225D85.270e-1150.00uncharacterized protein n=1 Tax=Scheffersomyces sp... [more]
A0A067CU23_SAPPC1.340e-1050.00ERCC4 domain-containing protein n=2 Tax=Saprolegni... [more]
A0A0P1BF91_9BASI1.360e-1058.18Histidine--tRNA ligase n=1 Tax=Ceraceosorus bombac... [more]
A0A7S0KJP7_9CHLO1.840e-1053.57Hypothetical protein n=2 Tax=Ostreococcus mediterr... [more]
A0A316VRW7_9BASI1.840e-1056.36ERCC4 domain-containing protein n=1 Tax=Ceraceosor... [more]
A0A316U2Q6_9BASI2.510e-1053.70ERCC4 domain-containing protein n=1 Tax=Pseudomicr... [more]
W4GRV4_9STRA4.640e-1043.28Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10150DNA REPAIR ENDONUCLEASE XPFcoord: 5..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig191193contigH-elongata_contig191193:248..442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig191193.5282.1mRNA_H-elongata_contig191193.5282.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig191193 248..442 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig191193.5282.1 ID=prot_H-elongata_contig191193.5282.1|Name=mRNA_H-elongata_contig191193.5282.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp
CRLDKAGESLNILQDLEPDFVVLYDPDAAFVRKLEAYQATRSRERHPLAV
YFMLYAESLEEQRLI
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