mRNA_H-elongata_contig10647.527.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10647.527.1
Unique NamemRNA_H-elongata_contig10647.527.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig10647.527.1 vs. uniprot
Match: A0A6H5JGP2_9PHAE (Rho-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP2_9PHAE)

HSP 1 Score: 678 bits (1749), Expect = 3.290e-233
Identity = 346/436 (79.36%), Postives = 379/436 (86.93%), Query Frame = 1 
Query:  106 MRDGLKDIQAQVRNYVLATEGLFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGLNEYLEAPLKAVLDFCDNIDSLAKHRDELRLDYDHHKRKHDAVAARLESGKG-DVEEGAKTRSAKLNDSIKKLKDCTTQVLAQVAALAKVEPQLKESLFKGLSACQVFYCQASLSAFEPDFVQSADMQDYIVSLQRAASTLEKGMPLPPLGEHVTYLQNALAAAAAEVRGEGEIGEVFGRPLSDFEETPPVLLECMGFLDAQGLYVPGLFRVPGNTETIRDLKAQFDTGEHVEFDERIHHVHEVATLLKMYFRELPDPVVPTAHYHTMLEASVRGQPEFVETARLCVGQFPTINFTCLRMLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNTTEMNVMDLQSCINLVRRMIESASDIFPDLWQGYPAASGQG 1410
            MRDGLKDIQAQVRNYVLA EGLFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGL EYLEAPLKAVLDFCD ID LAK R +L LDYDHHKRKH+A  AR ESGKG D+E+  K RS KLN SI  LKDCTTQ+LAQVAAL+KVEPQLKESLFKGLSACQVFYCQASLSAFE DFV+S DM+DY++SLQ   +TLE  MPLPPLGEHV +L+NALA+AAAEVRGEG++G V+GRPLSD EE PP+LLEC+GFLDA GLYVPGLFRVPG+TE I+ LK+ FD GEHVEFDERIH VHEVATLLKMYFRELP+PVVPTA YH MLEAS    PEFVET R+ V Q P IN TC+R+LFAFL RVSL SA+N MTTENLGIVFAPNLLRAPN TE+NVMDLQ CINLV+R+IE A +IFP LW+GYP A+ QG
Sbjct:    1 MRDGLKDIQAQVRNYVLAMEGLFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGLTEYLEAPLKAVLDFCDGIDLLAKQRGQLLLDYDHHKRKHEA--ARRESGKGGDMEDEVKARSTKLNASIDNLKDCTTQILAQVAALSKVEPQLKESLFKGLSACQVFYCQASLSAFETDFVESTDMRDYVMSLQSTTTTLENSMPLPPLGEHVAFLRNALASAAAEVRGEGKLGYVYGRPLSDLEEPPPLLLECIGFLDANGLYVPGLFRVPGSTEKIQQLKSTFDAGEHVEFDERIHDVHEVATLLKMYFRELPEPVVPTAFYHPMLEAS--DLPEFVETVRVLVAQLPEINRTCVRLLFAFLLRVSLLSAENLMTTENLGIVFAPNLLRAPNATEINVMDLQPCINLVKRIIECAEEIFPGLWKGYPVAASQG 432
[Close]
BLAST of mRNA_H-elongata_contig10647.527.1 vs. uniprot
Match: D7G3V4_ECTSI (Rho-GAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3V4_ECTSI)

HSP 1 Score: 468 bits (1205), Expect = 3.000e-152
Identity = 267/443 (60.27%), Postives = 291/443 (65.69%), Query Frame = 1 
Query:    1 LHRVGEKAIQRIRPVIPSNDVNTGDIGQPLQSFAQMRDGLKDIQAQVRNYVLATEGLFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGLNEYLEAPLKAVLDFCDNIDSLAKHRDELRLDYDHHKRKHDAVAARLESGKG-DVEEGAKTRSAKLNDSIKKLKDCTTQVLAQVAALAKVEPQLKESLFKGLSACQVFYCQASLSAFEPDFVQSADMQDYIVSLQRAASTLEKGMPLPPLGEHVTYLQNALAAAAAEVRGEGEIGEVFGRPLSDFEETPPVLLECMGFLDAQGLYVPGLFRVPGNTETIRDLKAQFDTGEHVEFDERIHHVHEVATLLKMYFRELPDPVVPTAHYHTMLEASVRGQPEFVETARLCVGQFPTINFTCLRMLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNTTEMNVMDLQSCI 1326
            ++ VGEKAI +I    PSND NTGDI QPL SF QMRDGLKDIQAQVRNYVLA EGLFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGL EYLEAPLKAVLDFCD ID LAK R +L LDY HHKRKH+AV AR ESGKG D+EE  K RS KLN SI  LKDCTTQ+LAQVAAL+K                      ASLSAFE DFV+S DM+DY+++LQ   +TLE  MPLPPLGEHV +L+NAL                                                                            IH VHEVATLLKMYFRELP+PVVPTA Y+ MLEASV+   EFVET R+ V Q P IN TC+R+LFAFL RVSL SA+N MTTENLGIVFAPNLLRAPN TEMNVMDLQ  +
Sbjct:    1 MYMVGEKAILKIGLAAPSNDANTGDIEQPLHSFVQMRDGLKDIQAQVRNYVLAMEGLFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGLTEYLEAPLKAVLDFCDGIDLLAKRRGQLLLDYGHHKRKHEAVEARRESGKGGDMEEEVKARSTKLNASIDNLKDCTTQILAQVAALSK----------------------ASLSAFETDFVESTDMRDYVMNLQSTTTTLENSMPLPPLGEHVAFLRNAL----------------------------------------------------------------------------IHDVHEVATLLKMYFRELPEPVVPTAFYYPMLEASVKDLTEFVETVRVLVAQLPEINRTCVRLLFAFLLRVSLLSAENLMTTENLGIVFAPNLLRAPNATEMNVMDLQRAV 345
[Close]
BLAST of mRNA_H-elongata_contig10647.527.1 vs. uniprot
Match: A0A836CHK5_9STRA (Rho GTPase activation protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHK5_9STRA)

HSP 1 Score: 288 bits (736), Expect = 4.920e-82
Identity = 195/549 (35.52%), Postives = 273/549 (49.73%), Query Frame = 1 
Query:   49 PSNDVNTGDIGQPLQSFAQMRDGLKDIQAQVRNYVLATEGLFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGLNEYLEAPLKAVLDFCDNIDSLAKHRDELRLDYDHHKRKHDAVAARL--------------------ESGKGDVEEGAKT-RSAKLNDSIKKLKDCTTQVLAQVAALAKVEPQLKESLF------------------KGLSACQVFYCQASLSAFEPDFVQSADMQDYIVSLQRAASTLEKGMPLPPLGEHVTYLQNALAAAAAEVR--------------------------GEGE-----------------------------IGEVFGRPLSDFEETPPVLLECMGFLDAQGLYVPGLFRVPGNTETIRDLKAQFD------TGEHVEFDERIHHVHEVATLLKMYFRELPDPVVPTAHYHTMLEASVRGQPEFVET-ARLCVGQFPTINFTCLRMLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNTTEMNVMDLQSCINLVRRMIESASDIFPDLWQGYP 1392
            PSND N+  +  PL  F Q RD L  +Q QV+ Y++A E  F  A ++TFL AP +G+TA+ ++ +L +  V +A+++G++E+L APL+AVL FCD +D+L K R  L LDYDHHKRK  A+A R+                     +   D +E   T R AKL+ +   L+  TT++LA++AALA+V  QL ES                    +GL+AC  +    + +  E   + +A      V+  RA +  +    +P   E    +++ALAAAA E R                          G+ E                              G +FGR LS ++  P  +   + FLDA  LY   LFR PG+ ET+ +LK Q D             +   H  H+ + LLKM+FRELP+P+ P A Y   LEA            AR  + + P I+  C R+LFA L+RV+LC+ DNKM  ENLGIVFAPNLLR+ +  E  V DLQ CI  VRRM+E A ++F DLW GYP
Sbjct:    6 PSNDENSASLEAPLAEFNQTRDNLALMQKQVKAYMVAVEAEFTMAQHLTFLHAPHTGDTAQFVEAALAKNPVHEALMKGMHEWLCAPLQAVLAFCDEVDALTKARAALVLDYDHHKRKLAAIAQRIAXXXXXXXXXXXXXXXXXVRRASTLDADEKDLTARQAKLDATTADLRGATTELLARLAALAQVHCQLHESTIACXXXXXXXXXXXXXXVCRGLAACTAYRAAEAAAPLEVGGLLAARDVAECVAAMRACAETDGRAAIP--AEQELCVRDALAAAADEARAMQAASATSSPRSATAACSPAAADAWGDSEGGARGFRSGSSVTARRPSETPXXXXXXXARGALFGRSLSTWDAPPAPVRHLVHFLDANALYTRFLFRQPGSAETVAELKRQLDGXXXXXXXXXXXLEPGAHDAHDASALLKMFFRELPEPLFPAAQYAAALEAXXXXXXXXXXARARALLARAPPIHEACARLLFALLHRVNLCATDNKMPAENLGIVFAPNLLRSADAGEPCVADLQQCITFVRRMVEGAPEVFTDLWSGYP 552
[Close]
BLAST of mRNA_H-elongata_contig10647.527.1 vs. uniprot
Match: A0A835YT43_9STRA (Rho GTPase activation protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT43_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.630e-47
Identity = 144/452 (31.86%), Postives = 195/452 (43.14%), Query Frame = 1 
Query:  316 AVLDFCDNIDSLAKHRDELRLDYDHHKRKHDAVAARLESG-------KGDVEE-GAKTRSAKLNDSIKKLKDCTTQVLAQVAALAKVEPQLKESLFKGLSACQVFYCQAS-LSAFEP-----------------------------DFVQSADMQDYIVSLQRAASTLEKGMPLPPLGEHVTYLQNALAAAAAEVRGEGEIGEVFGRPLSDFEETPPVLLECMGFLDAQGLYVPGLFRVPGNTETIRDLKAQFDTGEHVEFDE-------------------------------RIHH-VHEVATLLKMYFRELPDPVVPTAHYHTMLEASVR-----GQPE---------------FVETARLCVGQFPTINFTCLRMLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNTTEMNVMDLQSCINLVRRMIESASDIFPDLWQGYPAAS 1401
            +V  +CD  D+LAK R  L LDYDHHKRK  A   R  +          D +E  A  R AKL  S   L+  T  +LA +AAL++VE  L++++ +GL+A          L  + P                                                                           AE+      G +FGR L+ +   PP L E + +LDA GLYV GLFR+P   + + DLK ++D GE V  D                                R+ H VH++A LLKM+FRELP+P++P A Y   L+A+         P+                   AR  +   P     C R+LFA L+RV LC+ DNKMT ENLGIVFAPNLLR     +  + +LQ CI  VRR++ESA D+F +LW GYP++S
Sbjct:  155 SVTAWCDTTDALAKRRAALVLDYDHHKRKLAAAQQRAAAAHATGRRASADTDERDAALRQAKLAASTNDLRATTADLLAHIAALSRVERALRDAVCRGLAAAXXXXXXXXRLRRWTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELEAHPP-GALFGRSLAAWSAPPPPLREWVAYLDAHGLYVRGLFRLPAALDDVSDLKRRYDAGEAVALDAVSSSSGXXXXXXXXXXXXXXXXXXASGFAAPRLRHSVHDIAALLKMFFRELPEPLIPAASYRAALDAAAAPALAAAAPDGSGAVAXXXXXXXXXXXXXARPLLAALPPTPRACARLLFALLHRVHLCAGDNKMTAENLGIVFAPNLLRPAEAGQPTMAELQPCIMFVRRVVESAPDVFANLWDGYPSSS 605
[Close]
BLAST of mRNA_H-elongata_contig10647.527.1 vs. uniprot
Match: A0A7S2WAA0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WAA0_9STRA)

HSP 1 Score: 133 bits (334), Expect = 6.020e-29
Identity = 120/409 (29.34%), Postives = 192/409 (46.94%), Query Frame = 1 
Query:  262 VQDAMIRGL-NEYLEAPLKAVLDFCDNIDSLAKHRDELRLDYDHHKRKHDAVAARLESGK-GDVEEGAK---------------------TRSAKLNDSIKKLKDCTTQVLAQVAALAKVEPQ--LKESLFKGLSACQVF---YCQASLSAFEPDFVQSADMQDYIVSLQRAASTLEKGMPLPPLG-----EHVTYLQNALAAAAAEVRGEGEIGEVFGRPLSDFEETPPVLLECMGFLDAQGLYVPGLFRVPGNTETIRDLKAQFDTGEHVEFDERIH--HVHEVATLLKMYFRELPDPVVPTAHYH---TMLEASVRGQ-PEFVETARLCVGQFPTINFTCLRMLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNTTEMNVM--DLQSCINLVRRMIESASDI 1365
            +Q A +  L  E ++A  + +L     ++   +HR +L LDY+   RK++    R    +  D+E+G+K                      R  KL ++   +  CT  +L Q   +A+      + E     L ACQ+    +    L   +P F           S++  A+TL +    PP       E V ++ N+    A + +   E   VFG PL     +  V+ EC+ FL   GL   G+FRVPGN   +  ++ ++D GE     +  H   VH+V TLLK++ RELP+PV+PT +Y    +++ + ++G+ P+        V   PTI+   L  L +FL  VS    +NKM+  NL   FAP+L+RAP  TE+NV+  D+Q+ I  VR  I +A  +
Sbjct:   73 IQLASVERLYEEEVKAATELLLWQVPEVEDKVRHRKKLVLDYNAQLRKYEHACGRTAQVEYSDMEKGSKKSLKNALYRRKSESEIAEEIANRKIKLEEAELAVDKCTKWILQQFQEIAEKRRTGTILEGPMSALLACQLHLSSHTSQRLEVVKPSFQ----------SVESFATTLARYDKEPPKTHTLDVEGVAHITNS----ATKRKTVTEDTHVFGVPLE--ASSSIVVSECIAFLQETGLTTEGMFRVPGNQLNVDLIRQRYDKGEKGVISDPKHPARVHDVCTLLKLWMRELPEPVIPTNYYEKLMSLVRSDLKGEDPKTTLHVIAFVDDLPTIHQQLLGTLVSFLDDVSQKKDENKMSAANLATCFAPSLMRAPEGTEINVILQDMQAAITAVRIFILNADQL 465
[Close]
BLAST of mRNA_H-elongata_contig10647.527.1 vs. uniprot
Match: A0A315VPV3_GAMAF (Rho-GAP domain-containing protein n=1 Tax=Gambusia affinis TaxID=33528 RepID=A0A315VPV3_GAMAF)

HSP 1 Score: 120 bits (300), Expect = 1.450e-24
Identity = 67/185 (36.22%), Postives = 100/185 (54.05%), Query Frame = 1 
Query:  844 TPPVLLECMGFLDAQGLYVPGLFRVPGNTETIRDLKAQFDTGEHVEFDERIHHVHEVATLLKMYFRELPDPVVPTAHYHTMLEASVRGQPEF------VETARLCVGQFPTINFTCLRMLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNTTEMNVMDLQSCIN-LVRRMIESASDIFPDL 1377
             P V+ +C+ F+  +GL+  GLFR PG T  +++L+  FD+GE   FD R   VH VA+LLK+Y R+LP+P+VP +HY   L   + GQ  F      +E  +  + + P  NF  L  +  FL  V  CS+ NKM  +NL  VF PN+LRA      ++M     +  L+  +I     +F + 
Sbjct:   96 VPLVVEQCVTFIRERGLHEVGLFRQPGRTSLVKELQEAFDSGERPSFDSRTD-VHTVASLLKLYLRQLPEPLVPYSHYQDFL---LCGQKLFSDRTVGLEELKNLLHELPVANFNLLNFICQFLNEVQSCSSSNKMNVQNLATVFGPNILRAKAEDPESIMGAAKLVQVLMSELIREHETLFANF 276
[Close]
BLAST of mRNA_H-elongata_contig10647.527.1 vs. uniprot
Match: A0A7S1EA08_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EA08_HEMAN)

HSP 1 Score: 112 bits (279), Expect = 6.090e-24
Identity = 73/195 (37.44%), Postives = 100/195 (51.28%), Query Frame = 1 
Query:  802 IGEVFGRPLSDFEETPP-------VLLECMGFLDAQGLYVPGLFRVPGNTETIRDLKAQFDTGEHVEFDERIHHVHEVATLLKMYFRELPDPVVPTAHYHTMLEA-SVRGQPEFVETARLCVGQFPTINFTCLRMLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNTTEMNVM-DLQSCINLVRRMIESAS 1359
            +G +FGR L++     P       +L     +L   GL   GLFRVPGN + I  LK Q D GE  E       V++VA LLK+Y R+LPDP++P   Y   ++A S+  + E     RL        N   L  L   L+ VSL S  N+M++ NL +VFAPNLL A   T   +M D  +C  +VR ++E  S
Sbjct:   28 LGHIFGRSLAEAVALEPPGTSVPWILSSATLYLATNGLETEGLFRVPGNAQAIERLKGQMDQGELTEIPADSE-VNDVAGLLKLYVRQLPDPLLPFHLYRDFVDAASLEEEEERKARVRLLASSLKEENAAALGCLMRTLHSVSLRSDKNRMSSANLAVVFAPNLLHAKEETMEQLMRDQAACETVVRMLVEDPS 221
[Close]
BLAST of mRNA_H-elongata_contig10647.527.1 vs. uniprot
Match: A0A152A0I9_9MYCE (RhoGAP domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A0I9_9MYCE)

HSP 1 Score: 119 bits (299), Expect = 7.240e-24
Identity = 73/198 (36.87%), Postives = 113/198 (57.07%), Query Frame = 1 
Query:  811 VFGRPLSDFEETP------PVLLEC-MGFLDAQGLYVPGLFRVPGNTETIRDLKAQFDTGEHVEFDERIHHVHEVATLLKMYFRELPDPVVPTAHYHTMLEASVRG---QPEFVETARLCVGQFPTINFTCLRMLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNTTEMNVM-DLQSCINLVRRMIESASDIFP 1371
            +FG PL +  + P      P+L E  +G+L+ + L+V G+FR+ G    I+ LKA FD GE V+ ++ +  VH VA LLK+Y RELP P+ P   Y + +E  ++G   +P+ +E+ +L +   P  N    + LF FL +V   S  NKMT  N+ IVFAPNLL+      +NV+ D Q    +V+ ++E+   + P
Sbjct:  536 MFGSPLEEVVQRPDNPCEIPMLFEKGLGYLERRALHVEGIFRLSGANSQIKSLKAGFDAGEDVDLED-VEDVHTVAGLLKLYLRELPQPLFPFDTYSSFIEI-IKGDAPKPQKIESLKLLISLLPPANKALTKHLFKFLSKVLQNSHINKMTAVNISIVFAPNLLKDGENNILNVVSDAQYVNQVVQLILENVHIVIP 731
[Close]
BLAST of mRNA_H-elongata_contig10647.527.1 vs. uniprot
Match: A0A7S2C7K2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C7K2_9STRA)

HSP 1 Score: 113 bits (282), Expect = 7.910e-24
Identity = 78/226 (34.51%), Postives = 123/226 (54.42%), Query Frame = 1 
Query:  751 LQNALAAAAAEVRGEGEIGEVFGRPLSDFEETPPVLLECMGFLDAQG--LYVPGLFRVPGNTETIRDLKAQFDTGEHVEFDERIH----HVHEVATLLKMYFRELPDPVVPTAHYHTMLEASVRGQPEFVETARLCVGQFPTINFTCLRMLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNTTEMN-VMDLQSCINLVRRMIESASDIFPD---LWQGYPAA 1398
            L NAL  A A++  E E   VFG+ L      P VL++ + FL+A+   L   G+FR+PGN+E + +L+ Q D G  V+  +  +     V E+ATLLK++FRELP+P++P+   ++M+         F         Q   +    LR+L A L RV+     NKM + NL + FAP L     T+++N + ++Q  I LV++MI++A  +F     L++ YP A
Sbjct:    9 LVNALEKAEADMMHE-EALRVFGKDLDAATTVPLVLIQTLAFLEAKPDQLATEGIFRIPGNSEVVDNLREQLDRGT-VDLADACYLLGAQVPEIATLLKLFFRELPEPLLPSTFCNSMMIGG------FTTNRPAAFSQLSAVKQEVLRLLMACLSRVAK-EDTNKMDSNNLAVCFAPTLCGLTETSDVNDLSEVQRTIELVKQMIDNAEVLFSSDGGLFKDYPIA 225
[Close]
BLAST of mRNA_H-elongata_contig10647.527.1 vs. uniprot
Match: UPI0016042B8B (rho GTPase-activating protein 22-like isoform X1 n=4 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016042B8B)

HSP 1 Score: 118 bits (296), Expect = 9.610e-24
Identity = 77/232 (33.19%), Postives = 119/232 (51.29%), Query Frame = 1 
Query:  739 HVTYLQNALAAAAAE--VRGEGEI------GEVFGRPLSDF--------EETPPVLLE-CMGFLDAQGLYVPGLFRVPGNTETIRDLKAQFDTGEHVEFDERIHHVHEVATLLKMYFRELPDPVVPTAHYHTMLEASVR---GQPEFVETARLCVGQFPTINFTCLRMLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNTTEMNVMDLQSCIN-LVRRMIESASDIFP 1371
            H TYL  A + +  E  +R    +      G +FG+ L +           T PV++E    ++   G+   GLFR+PG+   +++L+  +D GE  +F+E    V  VA+LLK++ RELP+PVVP A Y + L+ +      + E V      + Q P  NF  LR L  FL+ V L +  N+MT ENL  VF PN+ R  + + +N+M+  + I  L R +I     +FP
Sbjct:   89 HETYLIQAASQSEMEAWIRAIRRVIYAPYGGGIFGQSLEETMRYERRYGNRTVPVIIEQTAAYIRKHGMAQEGLFRLPGSLTVVKELQDVYDRGERPDFEELQADVDSVASLLKLFLRELPEPVVPFAQYESFLQTARLLKVSEAEGVSRLAQLLKQLPEDNFNLLRFLCRFLFEVQLQAQLNRMTAENLATVFGPNIARPLSESPLNIMETTALIQRLTRTLIAEQDAMFP 320
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10647.527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGP2_9PHAE3.290e-23379.36Rho-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
D7G3V4_ECTSI3.000e-15260.27Rho-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CHK5_9STRA4.920e-8235.52Rho GTPase activation protein n=1 Tax=Tribonema mi... [more]
A0A835YT43_9STRA1.630e-4731.86Rho GTPase activation protein n=1 Tax=Tribonema mi... [more]
A0A7S2WAA0_9STRA6.020e-2929.34Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A315VPV3_GAMAF1.450e-2436.22Rho-GAP domain-containing protein n=1 Tax=Gambusia... [more]
A0A7S1EA08_HEMAN6.090e-2437.44Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A152A0I9_9MYCE7.240e-2436.87RhoGAP domain-containing protein n=1 Tax=Tieghemos... [more]
A0A7S2C7K2_9STRA7.910e-2434.51Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
UPI0016042B8B9.610e-2433.19rho GTPase-activating protein 22-like isoform X1 n... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10647contigH-elongata_contig10647:1785..8839 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score429.9
Seed ortholog evalue1.4e-117
Seed eggNOG ortholog2880.D7G3V4
EggNOG free text desc.GTPase activator activity
EggNOG OGsKOG4270@1,KOG4270@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons11
Model size3287
Cds size1308
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929595.1550875-UTR-H-elongata_contig10647:1784..36581622929595.1550875-UTR-H-elongata_contig10647:1784..3658Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10647 1785..3658 -
1691679083.8722625-UTR-H-elongata_contig10647:1784..36581691679083.8722625-UTR-H-elongata_contig10647:1784..3658Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10647 1785..3658 -
1622929595.331114-UTR-H-elongata_contig10647:8734..88391622929595.331114-UTR-H-elongata_contig10647:8734..8839Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10647 8735..8839 -
1691679083.9994628-UTR-H-elongata_contig10647:8734..88391691679083.9994628-UTR-H-elongata_contig10647:8734..8839Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig10647 8735..8839 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929595.1662543-CDS-H-elongata_contig10647:3658..37541622929595.1662543-CDS-H-elongata_contig10647:3658..3754Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 3659..3754 -
1691679083.882015-CDS-H-elongata_contig10647:3658..37541691679083.882015-CDS-H-elongata_contig10647:3658..3754Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 3659..3754 -
1622929595.1865718-CDS-H-elongata_contig10647:3969..41171622929595.1865718-CDS-H-elongata_contig10647:3969..4117Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 3970..4117 -
1691679083.899245-CDS-H-elongata_contig10647:3969..41171691679083.899245-CDS-H-elongata_contig10647:3969..4117Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 3970..4117 -
1622929595.2019277-CDS-H-elongata_contig10647:4407..45831622929595.2019277-CDS-H-elongata_contig10647:4407..4583Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 4408..4583 -
1691679083.9086246-CDS-H-elongata_contig10647:4407..45831691679083.9086246-CDS-H-elongata_contig10647:4407..4583Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 4408..4583 -
1622929595.220244-CDS-H-elongata_contig10647:4973..50941622929595.220244-CDS-H-elongata_contig10647:4973..5094Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 4974..5094 -
1691679083.920753-CDS-H-elongata_contig10647:4973..50941691679083.920753-CDS-H-elongata_contig10647:4973..5094Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 4974..5094 -
1622929595.2353854-CDS-H-elongata_contig10647:5338..54451622929595.2353854-CDS-H-elongata_contig10647:5338..5445Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 5339..5445 -
1691679083.936814-CDS-H-elongata_contig10647:5338..54451691679083.936814-CDS-H-elongata_contig10647:5338..5445Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 5339..5445 -
1622929595.2513347-CDS-H-elongata_contig10647:5726..58761622929595.2513347-CDS-H-elongata_contig10647:5726..5876Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 5727..5876 -
1691679083.9452488-CDS-H-elongata_contig10647:5726..58761691679083.9452488-CDS-H-elongata_contig10647:5726..5876Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 5727..5876 -
1622929595.2699482-CDS-H-elongata_contig10647:6039..61051622929595.2699482-CDS-H-elongata_contig10647:6039..6105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 6040..6105 -
1691679083.9530082-CDS-H-elongata_contig10647:6039..61051691679083.9530082-CDS-H-elongata_contig10647:6039..6105Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 6040..6105 -
1622929595.2841146-CDS-H-elongata_contig10647:6860..69921622929595.2841146-CDS-H-elongata_contig10647:6860..6992Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 6861..6992 -
1691679083.9615169-CDS-H-elongata_contig10647:6860..69921691679083.9615169-CDS-H-elongata_contig10647:6860..6992Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 6861..6992 -
1622929595.2963407-CDS-H-elongata_contig10647:7434..76171622929595.2963407-CDS-H-elongata_contig10647:7434..7617Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 7435..7617 -
1691679083.9699123-CDS-H-elongata_contig10647:7434..76171691679083.9699123-CDS-H-elongata_contig10647:7434..7617Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 7435..7617 -
1622929595.3080008-CDS-H-elongata_contig10647:8103..81991622929595.3080008-CDS-H-elongata_contig10647:8103..8199Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 8104..8199 -
1691679083.9792738-CDS-H-elongata_contig10647:8103..81991691679083.9792738-CDS-H-elongata_contig10647:8103..8199Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 8104..8199 -
1622929595.3185666-CDS-H-elongata_contig10647:8701..87341622929595.3185666-CDS-H-elongata_contig10647:8701..8734Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 8702..8734 -
1691679083.9886224-CDS-H-elongata_contig10647:8701..87341691679083.9886224-CDS-H-elongata_contig10647:8701..8734Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10647 8702..8734 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10647.527.1prot_H-elongata_contig10647.527.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10647 3659..8734 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10647.527.1

>prot_H-elongata_contig10647.527.1 ID=prot_H-elongata_contig10647.527.1|Name=mRNA_H-elongata_contig10647.527.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=436bp
MRDGLKDIQAQVRNYVLATEGLFGAAHNMTFLFAPLSGETAKQLKLSLCR
VAVQDAMIRGLNEYLEAPLKAVLDFCDNIDSLAKHRDELRLDYDHHKRKH
DAVAARLESGKGDVEEGAKTRSAKLNDSIKKLKDCTTQVLAQVAALAKVE
PQLKESLFKGLSACQVFYCQASLSAFEPDFVQSADMQDYIVSLQRAASTL
EKGMPLPPLGEHVTYLQNALAAAAAEVRGEGEIGEVFGRPLSDFEETPPV
LLECMGFLDAQGLYVPGLFRVPGNTETIRDLKAQFDTGEHVEFDERIHHV
HEVATLLKMYFRELPDPVVPTAHYHTMLEASVRGQPEFVETARLCVGQFP
TINFTCLRMLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNTTEMNV
MDLQSCINLVRRMIESASDIFPDLWQGYPAASGQG*
back to top

mRNA from alignment at H-elongata_contig10647:1785..8839-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10647.527.1 ID=mRNA_H-elongata_contig10647.527.1|Name=mRNA_H-elongata_contig10647.527.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7055bp|location=Sequence derived from alignment at H-elongata_contig10647:1785..8839- (Himanthalia elongata Himel1 dioecious)
TTGCACAGGGTCGGAGAGAAGGCGATCCAGAGGATCAGGCCCGTGATACC
CAGCAATGACGTCAACACCGGGGACATCGGACAGCCGCTGCAAAGCTTTG
CGCAGATGCGGGACGGGCTGAAGGATATACAAGCACAGGTAAAGAGTTAG
ATAGGTAGTTGGGTGGGTAGCTAGTCAGTTTGGTAGTCGCTGGTCCATGC
TGCTATACACCGTCAACGCGCCTACGTTTACGGAAAAGTCTTGCCAGCGC
GATTACAGCTGATGCCGGTGTGGTTCTCTTTTCCTTCTTGGAGAAAGCGT
TGTTGAGATTTTGGGCACTCTCCTCCCGGCGGCCGGTCATTTGGGGTGAA
TTGTACACCACACGGAGGCTTGACAGACTGGTACTAAATAGTTGTGTGGT
CTGCCGGTAACTTCAGCGCATGGAGCATCACACCAATTGTGTTGTCAATC
TCCGCAAAAACGTTCCTTGTCGTTATTCGACTGCTTCAACACGCTAGGAA
AGTAGCCCCTTCCCATGGTCTAAGGCCCCCTACCATGCTCCACCAGCTTA
GGCATGTGTAGCTTGAATATCTCCCCGTCCTCATTCTCTGTTGAATGATA
TAATTGATGGATGCTTGTTTTTACCCGTTTATTGCGTTAGGTTCGCAACT
ACGTGCTCGCTACTGAGGGGCTTTTTGGAGCGGCGCATAACATGACGTTT
CTCTTCGCGCCACTGTCCGGGGAAACTGCTAAGCAGGTGACGTCACCAGA
CCGCCAAGCCGCGTTCTTTCTCCACGCACAATCATAAGCATACATATTCG
TGCACAGATGAGTAGATCAAACAATCTCAAACCGACTGCTGCAGCTTTAT
CACTCTCCGTTCCCCCGTTCCTCGGTAAATGGCAAAAACTCTGGACCGTA
AGTGCATTTAACGGTATTGTCAAGTGACGGTTGGACTTCCTTTCTTCTCC
CCCCTGGTGACCACGCCTCCGCGTCTTCGCCCACTTGCTGCCCAGCCGTC
GGGTGTCTTCAAGCTTTATATATTTATATCCTTTGACTACCCTTGTTTCA
GCTCCCGTCCTTCCTCCACCTCACGGCAGAGCCCCGACGAAGGGCAGTGA
GCAAGCGGCAGTAAACGCCCTCACTCGAGACGAAGTTTTTTTACCCCTGG
TCGTCCTCCACGGCTCGTTCTCCTGTCGTATTTCACCACTTCATCCCCCC
CTCCCCCATTTTGTTCGGGCAGTTGAAGCTGTCTCTGTGCAGGGTGGCGG
TGCAGGACGCAATGATCCGAGGGCTGAACGAGTACTTAGAAGCGCCGCTG
AAAGCTGTCCTGGATTTCTGCGACAACATCGATTCGCTCGCGAAGCATCG
AGACGAGCTCCGACTGGACTATGATCACCACAAGCGAAAACACGACGCGG
TCGCGGTAAGAGTGAACCACCGCGTGCAGGTGGCGATGATCAGTCGAATG
CTTGTCCCCTGCTGATGCTGCACCGTTCTGTTTCTTCCAAGCTTGGAGGC
GACGTCATGCTTTACGTGGCTGCAAGGCATAGGGACGTGTTGTTTTTGTT
ATTGTTAAGGGATGTATAAGGGGAATAGGGAACGACGGGGTAAATAAAAA
GGTGTGTATGGGGGGGGGGCGTGGAATGGATGTTCCAGAGGACATAACGT
TTTGTAGATGGAATATTTCCGCTACACTTCTTTGGTAATGGCCTTTTCGC
ACCGCAGGCGTTTTTCTCTCAGGACCACGCACGCACCGTTCGTGTGGGCA
ACACACCATCTTTCTCCCCTTCTTCGCCTTGTGCTGGGGAAAATATGCTC
TGCTGCCGTACACACCACCGTCTTTTGGCTATTTTGACGCTTCGCAGGCG
CGACTGGAGTCTGGGAAAGGGGACGTGGAAGAGGGGGCAAAAACGCGGTC
TGCGAAGTTGAATGACTCAATAAAAAAGCTCAAGGATTGCACCACGCAGG
TCCTTGCGCAGGTGGCTGCGCTGGCTAAGGCAAGGTTCCCTGAAGAGTAC
TCACGTAACTCGGGTTCAAGAAGAGGGGAGGAAGAGGGGGGGAGGTGCAC
TCAAGTTTCGCATGCCTTAGTTGTTAGACCATTGAGGGATCTGGGGAGGG
GGGAGTGACGCGCATGGATGTCTCAAACGAGCAGTGAATGTGATTTCCCC
GCTATTCTAGGCACGGACGAATTTTGTTTCGATAGATGTCTCCTCCTTGT
GAAGGCGTCGTGCGGGTAGAGCGGTCAGGGCTCTTGTGCGATGTTTTCTT
TCCTTCCCGTTTCGTTGCTTATATATTTTTTCGAAAATATGCAAATCCAT
AGCTAAAAGAAACCGCGGCGTTTGGCGGTAAAGCGCAACAGCGCATTAGA
CAATTCGCGATCAAAACATGTGGCCTTACGGGGACAGTAAAATGAGAAGA
TCACTTTTAGTTAAAGTCTGCGTTGAGCTCAACAGAGGTGAGGTGATTTC
CCGCAGGCCGCGAATGCGCACGCGCGCTCTCTCTCTGTATTTTCTATACT
TTGCGCGAAGAAGATGCTCGACATCGAGCGGTCGTGATCGTTTGGGGGGA
GGGGAAGGGGGTTGGGTTTTCGATTGTGCACCACACTCGGTCTTGGAAGG
CTTTTCCCGTCGCTATTTCATCGCGTGTTTTTATTCTCAACCTTTGATCC
TAACAGCGGACATGTAACCTTACACACTCGCGCATGCTCACAAAATATTG
ACACACCCCGATCCAAACCCCCTTCGAAAGACAGGTGGAACCTCAGCTCA
AGGAGTCCCTCTTCAAAGGGTTATCAGCGTGTCAGGTCTTCTACTGCCAG
GTACGGGTGCTTGACCATTTCTTTCACACTCTGTAAAGTCTTCGCCTCTT
TTTTGCATTTTTCCGGGAAATCTATACGAAGTATTTCGGTATATATACAT
AGTCTACATTTTAATCTCCTTGCCTCGCTCTCTCTCCGTCGTCGCTTTTC
GTGGCGAGCCCAGGCCTCCCTCTCTGCCTTCGAGCCGGACTTCGTACAGA
GCGCCGATATGCAGGACTATATTGTTAGTCTGCAGAGGGCCGCGTCAACC
CTAGAGAAAGGCATGCCGTTGCCTCCCTTGGGGGAGCACGTTACGTACCT
ACAAAACGCGTTGGTGAGTCATTCGCCGTGTCGGGACGTTTGCGCCTCCA
GCAGCCTTCGTCCGATAGGCCTGTGCGCCAGCAGCGCGAGCGACAAGGCA
GGAACACGAACGGAAGACATCTACATGGTCTAAACGGGAAACTTTCTCCT
CTACTTGAAAAAAATACGAATGTCTTTGGCGGTATCTCGTGTGGTGTGTG
ATGGACCCTTTCACGCAAGGCAGTTATCATATTCCTTCTCTCGTCCCTCT
CCTTTTCCGACGCGTCATCCATTTTGTTTTTGCTTTTCGGACAGGCCGCG
GCGGCAGCAGAGGTGCGCGGGGAGGGAGAGATCGGGGAGGTATTTGGCCG
CCCGCTGTCGGACTTTGAGGAGACTCCCCCCGTGTTGTTGGAATGTATGG
GGTGAGAGTTGCCGCTGACCGAAAATATGATATTTTGGGCTTGAGTGCCA
CATACCGTTGTCGGCCGCTCCTATTTAAGAGAGAGAGAGAGAGAGGAGGC
GGCGTGATTTTGTGCAATAATAGAGCTGGCTGTAACGCCCCCCCCCCGCT
GTTACCGTTGGTAGGAGGCTCTCTACTGTGACCATACAAGTATGAATGAT
TGTCCTAATACCAATCGCCTGTCTGCTCGTTTTTTTCCCGAGAAGGTTTC
TTGATGCGCAAGGGCTTTACGTTCCGGGGCTGTTTCGTGTGCCGGGCAAC
ACGGAGACCATTCGAGACCTGAAGGCGCAGTTCGACACCGGAGAGCACGT
GGAGTTTGACGAAAGGGTGAGCGCATTCACGGCAGGCCTCGGTCGAGGCA
GGAAGCCCTGCAACTTGATCGCCTTCGCCGAGCGGCCGGTGCTGTTTCAC
CGATGAGTTTTCGTTGGTGCCTCACGTGCAACAAGCAAAGCCTTTGTCGA
AGGCTTGAATGCTCGGTCGGACGTAGAATGAAATGCCCTCGGATATATCT
TAAGGGTTTTCTTTATCGATGTCGATTCCTCTCACAAATATTAAACCACG
CAGAGGGGTAGACATGGCAGCGAAGAGAGAACTAAAATTTGCGCGTGCGT
AGTTTAGCGACATGCCTCCTTAAGATAGGCGCGCTTGACGGTTTTCCTCT
ACCGCCTTCTATGTTTCGCTTATCTCGTCTCGGCGTGGTTGTGTGTCTTG
TCATAGATACACCACGTACACGAGGTGGCAACGCTCCTGAAAATGTACTT
CCGAGAGCTCCCCGACCCGGTGGTGCCAACGGCTCACTACCACACCATGC
TGGAGGCCAGCGTGAGGGGGCAGCCAGAGTTCGTGGAGACAGCGCGCCTA
TGCGTGGGCCAGTTTCCAACGATTAACTTCACGTGAGTTAATGGCACTGG
GAGGGGTGAACATATCTCGTGAAAAAGCGAAAGAACAGGATGGAGGGAGG
GGGCTGGTGTACAAGGGCGCTAGTGGGTATAGCATGGAAGCGAGCGTTCA
CTGCAGGCATTGCGATGTTTTCAGAAATCTAGCAAAATCTAGCCCATAAG
ACGGGGGGAGATGTACAAAACAGTATCATGGGTGGGTGCGTTCCGACACG
AAGGCGGCGTGGACCACGGTTGGGTTTTGTGACAAGAGTCCCCTTTTGAT
TTGTTATTGCTGTCTTCGGCAGGTGTCTCAGAATGCTTTTTGCCTTCCTG
TATCGTGTCAGCCTCTGCTCGGCGGATAACAAGATGACCACAGAGAACCT
CGGGATCGTCTTCGCGCCCAACCTTTTGAGGGCACCGAACACAACGGAAA
TGAACGTGATGGATCTACAGGTGTCATACGAGAGTAGATCGGCGCGCTTT
TCTGAACGTGTTGATACGCGCTCGTGGCTGTGGTTGTGGCGGTGACGTCA
AATCAGTGTTCAGGCGTACCATACCGTACTGCACTACCCTATACTGTGAA
AAACTGAGCTGAGCCGAACCAACCCTTGACGTGACATTGTTCCCTGTCGG
CGCGCACCTTCCGCGTATGTCAACGTCAACCACAGTCGTGCATCAATCTG
GTCAGGCGAATGATAGAAAGTGCTTCGGATATCTTCCCGGACTTATGGCA
AGGATACCCTGCGGCCTCCGGTCAAGGCTGAGCCGGAGACGGTGGGTTGA
AATTAGGGGGGGAGCAAGATGTTCTGGTTAAACGCGATTTTACTCCCGCA
GAGAGAAAGAGAGAAGGAGATTGAGAAGAGCGGCTTGATGGAGACGTTTA
TTTCCGCGACGTTAGCGGTCTGACGGAGATGTTCTTTTCCACCGCCCTGG
TGCTCGCTTTCGCGCACTTCGGCTCCTACAGTGTAGAGTATGAGGTCGTG
CCGTAAGATTATTAATAAAAAAAGAAGAGAAGACTGCGGTTTCCGAGGCT
GATGTTTCGGGTCGGGATTGCTTTGTGTTTGTTCTCGGGTCGGGGTACGC
TTGCTGGGCCTCGGCCTTGACGTTATTGATCAGGGGTGAGTGTGTTGCGC
TTGTTGTGATCATCTGAATGGGACGTACGTTTGCGCGTATTCCGCGGAAA
AGAGGAGTTCCATCTTTTCAAGCCTCTTGCTCTCGTGGAAGGCTCTTAAA
AGGGTTCAATGAGAGACGCTTGAGTGCCTCCCTGCCCCAGTGAGCTGAGG
CCTTGTATTCGCGAGGCCGATGGAGGAGGAAGTTAAGGCGCAAACGCGTC
CCCAAGGTTTTCGTGAAGTAGACGTGTTGAATGGATTCAGTGTGAGCATG
GTGCTCTTCACTTGGCACCCTTGGAACTAGCCCTTCGCCCGGCAATCCTC
TTTCTATGAAGCCTCGTGTGTCGGGGGTTAGATGGCAGACCGTGTTGGCG
GGCGAAGCGCACGGCCGCGCCGAAGACTCGCTCACAAACGAGCTGCGTTC
GATTGGATGATCTGTAGCCTAGCAGTGTAGTAAAGGAGTAACATCTACAG
TAGTAGCAACAGATCGAGCACACATGTGTGCGTGAGTGATAGGCTATTCG
CAGGTCATCGACTCCGCTCCGAGCGCATTTCTTGGGTTATTTCGCGCCAG
TATTTTTCTTCTTCTTTTCTTACTGACGATCGATGTCAGTACTTTGACGA
TATGGTCACCCTGGCTGCCCCAGGGCTCATCCTTGTTGGAGTTGGGGTCA
TCCGAGATTGTGGTGGGATTTTTTTCGTGTCGCGGGTGCAGATTAGCTCG
TGGTCATCGGATTCTGTGCAAGGGTCACATTATACAGCGACGATTCCAGG
CCACACCGTGGACTGACTGCTGGCGATACTGCTACTGTGCTACGGTTATT
GCAGAGAGGAGTGCTCGAGTGCCTTTTGGTCGTCCTAAAAGTACGATGCT
ATTTTATTTTTTATTTTTGTCCTGTCGTGTGTCCTCTACGCTGACGCGGC
CGTTGTCTCTGTTTTGGTTTGTCAGGGTTGGGAGGGTGAGAATTCAGGTC
TGTGCTTGTCTTGCAGTTAGTCGATATGTGTGACTTGTGACTGTGACTTG
GGTGACTTTCTTCCTTGTCCATATTCGGGTCTCTTGTGAATGGGTTTCCC
GTTTCTTGGTATTGACTAGTTATTGCTCTCCTGCGTCTCGGTCTTCTGGT
TTCTGTTTAGCTCTTATTTCCCCCCCCGCCTGCGTGCATGCCTCCTTATG
CAGTTGGTATTACTTGCGCTTTTTGCCTCAAGGGTACACTTCAGTTCGCC
GCAGGACGCGGGTTACATGTTTGACTATATCCGCTAGTATACCAGGGTAT
CTAGGTAAGCCTGGGTAGGTATGTGATGGTTCGTGTAGATACACAGTCGT
TCATGTTGACCGCCACGCATACCGGAATCGTGTACGGCTATCCCGGAGTC
GTGTACGTCTACAGTATATACCAATGCCTTTCGCTCGTGTGGAATCCGCC
CCCCAACATTATATTCAGTTTCAGTATACAGTCAGTTGACGTCCACGATG
TACGTAGTGAAGTGAAGTAAGCGAAGGTTGCTGCCAGCATGTTCGTGTGC
TCTTA
back to top

Coding sequence (CDS) from alignment at H-elongata_contig10647:1785..8839-

>mRNA_H-elongata_contig10647.527.1 ID=mRNA_H-elongata_contig10647.527.1|Name=mRNA_H-elongata_contig10647.527.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2616bp|location=Sequence derived from alignment at H-elongata_contig10647:1785..8839- (Himanthalia elongata Himel1 dioecious)
ATGCGGGACGGGCTGAAGGATATACAAGCACAGATGCGGGACGGGCTGAA
GGATATACAAGCACAGGTTCGCAACTACGTGCTCGCTACTGAGGGGCTTT
TTGGAGCGGCGCATAACATGACGTTTCTCTTCGCGCCACTGTCCGGGGAA
ACTGCTAAGCAGGTTCGCAACTACGTGCTCGCTACTGAGGGGCTTTTTGG
AGCGGCGCATAACATGACGTTTCTCTTCGCGCCACTGTCCGGGGAAACTG
CTAAGCAGTTGAAGCTGTCTCTGTGCAGGGTGGCGGTGCAGGACGCAATG
ATCCGAGGGCTGAACGAGTACTTAGAAGCGCCGCTGAAAGCTGTCCTGGA
TTTCTGCGACAACATCGATTCGCTCGCGAAGCATCGAGACGAGCTCCGAC
TGGACTATGATCACCACAAGCGAAAACACGACGCGGTCGCGTTGAAGCTG
TCTCTGTGCAGGGTGGCGGTGCAGGACGCAATGATCCGAGGGCTGAACGA
GTACTTAGAAGCGCCGCTGAAAGCTGTCCTGGATTTCTGCGACAACATCG
ATTCGCTCGCGAAGCATCGAGACGAGCTCCGACTGGACTATGATCACCAC
AAGCGAAAACACGACGCGGTCGCGGCGCGACTGGAGTCTGGGAAAGGGGA
CGTGGAAGAGGGGGCAAAAACGCGGTCTGCGAAGTTGAATGACTCAATAA
AAAAGCTCAAGGATTGCACCACGCAGGTCCTTGCGCAGGTGGCTGCGCTG
GCTAAGGCGCGACTGGAGTCTGGGAAAGGGGACGTGGAAGAGGGGGCAAA
AACGCGGTCTGCGAAGTTGAATGACTCAATAAAAAAGCTCAAGGATTGCA
CCACGCAGGTCCTTGCGCAGGTGGCTGCGCTGGCTAAGGTGGAACCTCAG
CTCAAGGAGTCCCTCTTCAAAGGGTTATCAGCGTGTCAGGTCTTCTACTG
CCAGGTGGAACCTCAGCTCAAGGAGTCCCTCTTCAAAGGGTTATCAGCGT
GTCAGGTCTTCTACTGCCAGGCCTCCCTCTCTGCCTTCGAGCCGGACTTC
GTACAGAGCGCCGATATGCAGGACTATATTGTTAGTCTGCAGAGGGCCGC
GTCAACCCTAGAGAAAGGCATGCCGTTGCCTCCCTTGGGGGAGCACGTTA
CGTACCTACAAAACGCGTTGGCCTCCCTCTCTGCCTTCGAGCCGGACTTC
GTACAGAGCGCCGATATGCAGGACTATATTGTTAGTCTGCAGAGGGCCGC
GTCAACCCTAGAGAAAGGCATGCCGTTGCCTCCCTTGGGGGAGCACGTTA
CGTACCTACAAAACGCGTTGGCCGCGGCGGCAGCAGAGGTGCGCGGGGAG
GGAGAGATCGGGGAGGTATTTGGCCGCCCGCTGTCGGACTTTGAGGAGAC
TCCCCCCGTGTTGTTGGAATGTATGGGGCCGCGGCGGCAGCAGAGGTGCG
CGGGGAGGGAGAGATCGGGGAGGTATTTGGCCGCCCGCTGTCGGACTTTG
AGGAGACTCCCCCCGTGTTGTTGGAATGTATGGGGTTTCTTGATGCGCAA
GGGCTTTACGTTCCGGGGCTGTTTCGTGTGCCGGGCAACACGGAGACCAT
TCGAGACCTGAAGGCGCAGTTCGACACCGGAGAGCACGTGGAGTTTGACG
AAAGGGTTTCTTGATGCGCAAGGGCTTTACGTTCCGGGGCTGTTTCGTGT
GCCGGGCAACACGGAGACCATTCGAGACCTGAAGGCGCAGTTCGACACCG
GAGAGCACGTGGAGTTTGACGAAAGGATACACCACGTACACGAGGTGGCA
ACGCTCCTGAAAATGTACTTCCGAGAGCTCCCCGACCCGGTGGTGCCAAC
GGCTCACTACCACACCATGCTGGAGGCCAGCGTGAGGGGGCAGCCAGAGT
TCGTGGAGACAGCGCGCCTATGCGTGGGCCAGTTTCCAACGATTAACTTC
ACATACACCACGTACACGAGGTGGCAACGCTCCTGAAAATGTACTTCCGA
GAGCTCCCCGACCCGGTGGTGCCAACGGCTCACTACCACACCATGCTGGA
GGCCAGCGTGAGGGGGCAGCCAGAGTTCGTGGAGACAGCGCGCCTATGCG
TGGGCCAGTTTCCAACGATTAACTTCACGTGTCTCAGAATGCTTTTTGCC
TTCCTGTATCGTGTCAGCCTCTGCTCGGCGGATAACAAGATGACCACAGA
GAACCTCGGGATCGTCTTCGCGCCCAACCTTTTGAGGGCACCGAACACAA
CGGAAATGAACGTGATGGATCTACAGGTGTCTCAGAATGCTTTTTGCCTT
CCTGTATCGTGTCAGCCTCTGCTCGGCGGATAACAAGATGACCACAGAGA
ACCTCGGGATCGTCTTCGCGCCCAACCTTTTGAGGGCACCGAACACAACG
GAAATGAACGTGATGGATCTACAGTCGTGCATCAATCTGGTCAGGCGAAT
GATAGAAAGTGCTTCGGATATCTTCCCGGACTTATGGCAAGGATACCCTG
CGGCCTCCGGTCAAGGCTGATCGTGCATCAATCTGGTCAGGCGAATGATA
GAAAGTGCTTCGGATATCTTCCCGGACTTATGGCAAGGATACCCTGCGGC
CTCCGGTCAAGGCTGA
back to top