prot_H-elongata_contig189479.5208.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig189479.5208.1
Unique Nameprot_H-elongata_contig189479.5208.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length43
Homology
BLAST of mRNA_H-elongata_contig189479.5208.1 vs. uniprot
Match: D7FWE1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE1_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 7.330e-16
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 0
Query:    1 MGNSQGSEETGKCGYRVLGVQPNSPGSKVGLVSFFDFIVAVNG 43
            MGNSQG+ + GKCGYRVLGVQPNSP SKVGLVSFFDFIVA +G
Sbjct:    1 MGNSQGAAQLGKCGYRVLGVQPNSPASKVGLVSFFDFIVAADG 43          
BLAST of mRNA_H-elongata_contig189479.5208.1 vs. uniprot
Match: A0A812RJH1_SYMMI (Gorasp2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RJH1_SYMMI)

HSP 1 Score: 63.5 bits (153), Expect = 4.530e-11
Identity = 31/42 (73.81%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 MGNSQGSEETGKCGYRVLGVQPNSPGSKVGLVSFFDFIVAVN 42
            MGNS   EE    GYRVLGVQPNSP S  GLVSFFDFIVA N
Sbjct:    1 MGNSSSKEEQDSVGYRVLGVQPNSPASNCGLVSFFDFIVAAN 42          
BLAST of mRNA_H-elongata_contig189479.5208.1 vs. uniprot
Match: A0A7S2CUT3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CUT3_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 7.460e-10
Identity = 29/43 (67.44%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 MGNSQGSEETGKCGYRVLGVQPNSPGSKVGLVSFFDFIVAVNG 43
            MG S   EE    GYRVLGVQPNSP S  GLVSFFDF+VA +G
Sbjct:    1 MGQSVSQEEVEAVGYRVLGVQPNSPASTAGLVSFFDFVVAADG 43          
BLAST of mRNA_H-elongata_contig189479.5208.1 vs. uniprot
Match: A0A7S2WEH5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEH5_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.400e-9
Identity = 28/42 (66.67%), Postives = 30/42 (71.43%), Query Frame = 0
Query:    1 MGNSQGSEETGKCGYRVLGVQPNSPGSKVGLVSFFDFIVAVN 42
            MG +   EE    GYRVLGVQPNSP S  GLVSFFDF+VA N
Sbjct:    1 MGQTMSQEEADSVGYRVLGVQPNSPASSAGLVSFFDFVVAAN 42          
BLAST of mRNA_H-elongata_contig189479.5208.1 vs. uniprot
Match: A0A7S2Y0B4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0B4_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.500e-9
Identity = 31/43 (72.09%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 MGNSQGSEETGKCGYRVLGVQPNSPGSKVGLVSFFDFIVAVNG 43
            MG     EE    GYRVLGVQ  SP SKVGLVSFFDFIVAVNG
Sbjct:    1 MGGGPSIEEIESVGYRVLGVQSQSPASKVGLVSFFDFIVAVNG 43          
BLAST of mRNA_H-elongata_contig189479.5208.1 vs. uniprot
Match: A0A835YI02_9STRA (GRASP55/65 PDZ-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI02_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.060e-9
Identity = 32/45 (71.11%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 MGNSQGSE--ETGKCGYRVLGVQPNSPGSKVGLVSFFDFIVAVNG 43
            MGN+   E  E+   GYRVLGVQPNSP S VGLVSFFDFIVA NG
Sbjct:    1 MGNTASDEGDESTCVGYRVLGVQPNSPASAVGLVSFFDFIVAANG 45          
BLAST of mRNA_H-elongata_contig189479.5208.1 vs. uniprot
Match: A0A7S3ZJU3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJU3_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 6.760e-9
Identity = 28/43 (65.12%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    1 MGNSQGSEETGKCGYRVLGVQPNSPGSKVGLVSFFDFIVAVNG 43
            MG     EE    GYRVLGVQP SP S VGLVSFFDF+VA +G
Sbjct:    1 MGQGASQEEADATGYRVLGVQPGSPASAVGLVSFFDFVVACDG 43          
BLAST of mRNA_H-elongata_contig189479.5208.1 vs. uniprot
Match: F0YJB4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJB4_AURAN)

HSP 1 Score: 56.6 bits (135), Expect = 1.660e-8
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 0
Query:   14 GYRVLGVQPNSPGSKVGLVSFFDFIVAVNG 43
            GYRVLGVQPNSP S VGLVSFFDF+VAV+G
Sbjct:    2 GYRVLGVQPNSPASDVGLVSFFDFVVAVDG 31          
BLAST of mRNA_H-elongata_contig189479.5208.1 vs. uniprot
Match: A0A6S8RPB4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8RPB4_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.270e-7
Identity = 30/48 (62.50%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    1 MGN--SQGSEETGKC---GYRVLGVQPNSPGSKVGLVSFFDFIVAVNG 43
            MGN  SQ   +   C   GYRVLGVQP+SP S+ GLVSFFDF+V VNG
Sbjct:    1 MGNAPSQDDHQYDGCTTLGYRVLGVQPDSPASRAGLVSFFDFLVGVNG 48          
BLAST of mRNA_H-elongata_contig189479.5208.1 vs. uniprot
Match: A0A7S3USI3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USI3_HETAK)

HSP 1 Score: 53.9 bits (128), Expect = 2.750e-7
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 MGNSQGSEETGKC-------GYRVLGVQPNSPGSKVGLVSFFDFIVAVNG 43
            MGNSQGS +T          GYR+LG  PNSP S++GLV FFD+IVA +G
Sbjct:    1 MGNSQGSPDTAGTDDPENVVGYRILGSLPNSPASEMGLVHFFDYIVAADG 50          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig189479.5208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWE1_ECTSI7.330e-1683.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A812RJH1_SYMMI4.530e-1173.81Gorasp2 protein (Fragment) n=1 Tax=Symbiodinium mi... [more]
A0A7S2CUT3_9STRA7.460e-1067.44Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2WEH5_9STRA1.400e-966.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2Y0B4_9STRA1.500e-972.09Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835YI02_9STRA2.060e-971.11GRASP55/65 PDZ-like domain-containing protein n=1 ... [more]
A0A7S3ZJU3_9STRA6.760e-965.12Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YJB4_AURAN1.660e-886.67Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A6S8RPB4_9STRA1.270e-762.50Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S3USI3_HETAK2.750e-756.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.42.10coord: 1..43
e-value: 1.7E-11
score: 46.4
IPR007583GRASP55/65PANTHERPTHR12893GOLGI REASSEMBLY STACKING PROTEIN GRASPcoord: 1..43
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 9..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig189479contigH-elongata_contig189479:798..926 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig189479.5208.1mRNA_H-elongata_contig189479.5208.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig189479 798..926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig189479.5208.1 ID=prot_H-elongata_contig189479.5208.1|Name=mRNA_H-elongata_contig189479.5208.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=43bp
MGNSQGSEETGKCGYRVLGVQPNSPGSKVGLVSFFDFIVAVNG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007583GRASP55_65
IPR036034PDZ_sf