prot_H-elongata_contig189394.5200.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig189394.5200.1
Unique Nameprot_H-elongata_contig189394.5200.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
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BLAST of mRNA_H-elongata_contig189394.5200.1 vs. uniprot
Match: D7FI26_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI26_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 3.700e-19
Identity = 44/61 (72.13%), Postives = 52/61 (85.25%), Query Frame = 0 
Query:    1 VGTPGRVRALAACGSLRLDECALLILDVEKNVKARSVLDMDGVARETMALLADHAKPYLTS 61
            VGTPGR+RALAA GSLRLD  AL+ILD+EKNVK RSVLDMDGV+ +TMA L+D  +P+L S
Sbjct:  291 VGTPGRMRALAAAGSLRLDSSALVILDLEKNVKGRSVLDMDGVSGDTMAFLSDCVRPHLVS 351
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BLAST of mRNA_H-elongata_contig189394.5200.1 vs. uniprot
Match: A0A6U1QK41_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QK41_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 5.790e-5
Identity = 22/59 (37.29%), Postives = 37/59 (62.71%), Query Frame = 0 
Query:    1 VGTPGRVRALAACGSLRLDECALLILDVEKNVKARSVLDMDGVARETMALLADHAKPYL 59
            VGTP R+  L + G L+L + +++I+D+ K+VK  S+L + GV  +   ++ D  KP L
Sbjct:   66 VGTPNRLYKLLSTGDLKLRDTSIIIIDMNKDVKNFSILQVHGVCEDLANVIKDFIKPEL 124
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BLAST of mRNA_H-elongata_contig189394.5200.1 vs. uniprot
Match: A0A8K1CKQ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKQ2_PYTOL)

HSP 1 Score: 48.5 bits (114), Expect = 9.720e-5
Identity = 23/59 (38.98%), Postives = 36/59 (61.02%), Query Frame = 0 
Query:    1 VGTPGRVRALAACGSLRLDECALLILDVEKNVKARSVLDMDGVARETMALLADHAKPYL 59
            VGTPGR++ L    +L L+    + +D+EK+ KA ++L++   A+E M LL  H  P L
Sbjct:  223 VGTPGRIKKLLEINALSLEHTTHVFIDMEKDKKAMTLLELKDTAKEMMELLQFHLLPQL 281
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig189394.5200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FI26_ECTSI3.700e-1972.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6U1QK41_9STRA5.790e-537.29Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8K1CKQ2_PYTOL9.720e-538.98Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032704Protein Cms1PANTHERPTHR24030FAMILY NOT NAMEDcoord: 1..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig189394contigH-elongata_contig189394:544..771 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig189394.5200.1mRNA_H-elongata_contig189394.5200.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig189394 544..771 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig189394.5200.1 ID=prot_H-elongata_contig189394.5200.1|Name=mRNA_H-elongata_contig189394.5200.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
VGTPGRVRALAACGSLRLDECALLILDVEKNVKARSVLDMDGVARETMAL
LADHAKPYLTSSSRNGVSKSGGGDKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032704Cms1