prot_H-elongata_contig186892.5088.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig186892.5088.1
Unique Nameprot_H-elongata_contig186892.5088.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length43
Homology
BLAST of mRNA_H-elongata_contig186892.5088.1 vs. uniprot
Match: D7FP08_ECTSI (C-CAP/cofactor C-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP08_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 4.290e-16
Identity = 38/42 (90.48%), Postives = 41/42 (97.62%), Query Frame = 0
Query:    2 RDLQVNYCQESYVYVLTAVRYATVLGCKDCTVVIGAAAGMVR 43
            RDLQVN CQESYVYVL+AVR+ATV+GCKDCTVVIGAAAGMVR
Sbjct:  119 RDLQVNCCQESYVYVLSAVRFATVMGCKDCTVVIGAAAGMVR 160          
BLAST of mRNA_H-elongata_contig186892.5088.1 vs. uniprot
Match: A0A835Z1R1_9STRA (Tubulin binding cofactor C-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1R1_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 9.560e-11
Identity = 28/42 (66.67%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    2 RDLQVNYCQESYVYVLTAVRYATVLGCKDCTVVIGAAAGMVR 43
            R LQV++C ESYVY+L   +YATVLGC +CT+V+GAAAG+VR
Sbjct:  366 RSLQVSHCHESYVYMLAPFQYATVLGCSECTIVVGAAAGVVR 407          
BLAST of mRNA_H-elongata_contig186892.5088.1 vs. uniprot
Match: A0A835YHX7_9STRA (Tubulin binding cofactor C-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHX7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 5.560e-9
Identity = 24/42 (57.14%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    2 RDLQVNYCQESYVYVLTAVRYATVLGCKDCTVVIGAAAGMVR 43
            R LQ+N C ESY+YVL  +R+AT++GC DCT+V+GA  G +R
Sbjct:  437 RQLQINQCHESYMYVLAPLRHATIVGCTDCTIVVGAVRGALR 478          
BLAST of mRNA_H-elongata_contig186892.5088.1 vs. uniprot
Match: A0A7S3XVC9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVC9_HETAK)

HSP 1 Score: 57.0 bits (136), Expect = 2.290e-8
Identity = 26/42 (61.90%), Postives = 33/42 (78.57%), Query Frame = 0
Query:    2 RDLQVNYCQESYVYVLTAVRYATVLGCKDCTVVIGAAAGMVR 43
            R + VN+C +SY+Y+L A + ATVLGC DCTVVIGA +GMV 
Sbjct:  140 RAVHVNHCHDSYIYLLGAFKSATVLGCTDCTVVIGAISGMVN 181          
BLAST of mRNA_H-elongata_contig186892.5088.1 vs. uniprot
Match: A0A4P1QVK6_LUPAN (TBCC domain-containing protein 1 n=4 Tax=Lupinus TaxID=3869 RepID=A0A4P1QVK6_LUPAN)

HSP 1 Score: 47.0 bits (110), Expect = 9.180e-5
Identity = 22/41 (53.66%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    3 DLQVNYCQESYVYVLTAVRYATVLGCKDCTVVIGAAAGMVR 43
             ++V  CQES +YVL  +RYATV GC D T+V+GA    VR
Sbjct:  341 SIKVLNCQESAIYVLAPLRYATVYGCSDATIVLGAVGKAVR 381          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig186892.5088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FP08_ECTSI4.290e-1690.48C-CAP/cofactor C-like domain-containing protein n=... [more]
A0A835Z1R1_9STRA9.560e-1166.67Tubulin binding cofactor C-domain-containing prote... [more]
A0A835YHX7_9STRA5.560e-957.14Tubulin binding cofactor C-domain-containing prote... [more]
A0A7S3XVC9_HETAK2.290e-861.90Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4P1QVK6_LUPAN9.180e-553.66TBCC domain-containing protein 1 n=4 Tax=Lupinus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016098Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminalGENE3D2.160.20.70coord: 1..43
e-value: 7.1E-6
score: 27.2
IPR012945Tubulin binding cofactor C-like domainPFAMPF07986TBCCcoord: 2..42
e-value: 7.1E-7
score: 29.0
IPR017901C-CAP/cofactor C-like domainPROSITEPS51329C_CAP_COFACTOR_Ccoord: 1..43
score: 13.084

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig186892contigH-elongata_contig186892:355..483 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig186892.5088.1mRNA_H-elongata_contig186892.5088.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig186892 355..483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig186892.5088.1 ID=prot_H-elongata_contig186892.5088.1|Name=mRNA_H-elongata_contig186892.5088.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=43bp
NRDLQVNYCQESYVYVLTAVRYATVLGCKDCTVVIGAAAGMVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016098CAP/MinC_C
IPR012945Tubulin-bd_cofactor_C_dom
IPR017901C-CAP_CF_C-like