prot_H-elongata_contig10622.508.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10622.508.1
Unique Nameprot_H-elongata_contig10622.508.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length270
Homology
BLAST of mRNA_H-elongata_contig10622.508.1 vs. uniprot
Match: A0A6H5L0J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J7_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 3.770e-24
Identity = 49/92 (53.26%), Postives = 64/92 (69.57%), Query Frame = 0
Query:    1 DVISAVAEFVSNDDYLFFASVRREWREAWRERPTATRAATAHTSVPQLLHSFACGLPKSSAICDELARTGNLHVLREARRNDNNCPWDSTTC 92
            D++S VAEFV ++ YLFFASV R WR+ W +RPT T+A TA TSVPQL  SF CGL +++A+C+ +A  G L +LR AR     C W+  TC
Sbjct:    8 DIVSTVAEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMG--CQWNENTC 97          
BLAST of mRNA_H-elongata_contig10622.508.1 vs. uniprot
Match: D7FMS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 1.440e-22
Identity = 48/92 (52.17%), Postives = 63/92 (68.48%), Query Frame = 0
Query:    1 DVISAVAEFVSNDDYLFFASVRREWREAWRERPTATRAATAHTSVPQLLHSFACGLPKSSAICDELARTGNLHVLREARRNDNNCPWDSTTC 92
            D++S V EFV ++ YLFFASV R WR+ W +RPT T+A TA TSV QL  SF CGL +++A+C+ +A  G L +LR AR     CPW+  TC
Sbjct:   10 DIVSTVGEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVSQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMG--CPWNENTC 99          
BLAST of mRNA_H-elongata_contig10622.508.1 vs. uniprot
Match: A0A6H5L0K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K8_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.670e-21
Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 0
Query:    2 VISAVAEFVSNDDYLFFASVRREWREAWRERPTATRAATAHTSVPQLLHSFACGLPKSSAICDELARTGNLHVLREARRNDNNCPWDSTTC 92
            ++S +AEFV ++ +LFFASV R WR+ W +RPT T+A TA TSVPQL  SF CGL +++A+C+ +A  G L +L+ AR     CPW+  TC
Sbjct:   27 LLSYLAEFVDDNQHLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLQRARAMG--CPWNENTC 115          
BLAST of mRNA_H-elongata_contig10622.508.1 vs. uniprot
Match: D8LDD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDD9_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 7.620e-20
Identity = 52/97 (53.61%), Postives = 61/97 (62.89%), Query Frame = 0
Query:    1 DVISAVAEFVSNDDYLFFASVRREWREAWRERPTATRAATAHTSVPQLLHSFACGL-PKSSAICDELARTGNLHVLREARRNDNNCPWDSTTCQQAA 96
            DVIS  +EFV +D +LFFASV R WR AWR RPT+TRA T  TS  QL HS  CGL P  +A+C  +A  G L +LR AR       WD  TC +AA
Sbjct:   10 DVISHASEFVHDDQFLFFASVSRAWRGAWRGRPTSTRAITPDTSPSQLRHSVDCGLSPGGTAVCTAIASLGRLDLLRAARALG--FRWDKMTCWKAA 104          
BLAST of mRNA_H-elongata_contig10622.508.1 vs. uniprot
Match: D8LFW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW3_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 5.440e-19
Identity = 43/92 (46.74%), Postives = 60/92 (65.22%), Query Frame = 0
Query:    1 DVISAVAEFVSNDDYLFFASVRREWREAWRERPTATRAATAHTSVPQLLHSFACGLPKSSAICDELARTGNLHVLREARRNDNNCPWDSTTC 92
            D++  +A+FV ++ +LFFA V   WREAW  RPT+TRA T H +  QL  SF+CGL K + +C+ +A  G L VL+ AR  +  CPW  +TC
Sbjct:   38 DIVRCLADFVHDEQHLFFAGVSTLWREAWGRRPTSTRAITEHVTPSQLCWSFSCGLRKRAEVCEAIAGFGKLEVLKRAR--ELKCPWGRSTC 127          
BLAST of mRNA_H-elongata_contig10622.508.1 vs. uniprot
Match: D7FH78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH78_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 8.410e-11
Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 0
Query:    1 DVISAVAEFVSNDDYLFFASVRREWREAWRERPTATRAATAHTSVPQLLHSFACGLPKS-SAICDELARTGNLHVL 75
            +++  +A+FV ++ +LFFA V + WR AW +RPT T   T  T+  QL HSF CGLP++ + +C  LAR G L++L
Sbjct:  114 NILLCLAQFVPDNQFLFFAPVAKGWRAAW-QRPTITAHVTPDTTTSQLQHSFECGLPQNQTGLCAALARLGKLNLL 188          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10622.508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L0J7_9PHAE3.770e-2453.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMS7_ECTSI1.440e-2252.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0K8_9PHAE1.670e-2150.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDD9_ECTSI7.620e-2053.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LFW3_ECTSI5.440e-1946.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FH78_ECTSI8.410e-1144.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 58..270
e-value: 2.9E-14
score: 54.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 68..269
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 34..269
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 34..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10622contigH-elongata_contig10622:6881..8011 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10622.508.1mRNA_H-elongata_contig10622.508.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10622 6881..8011 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10622.508.1 ID=prot_H-elongata_contig10622.508.1|Name=mRNA_H-elongata_contig10622.508.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=270bp
DVISAVAEFVSNDDYLFFASVRREWREAWRERPTATRAATAHTSVPQLLH
SFACGLPKSSAICDELARTGNLHVLREARRNDNNCPWDSTTCQQAAQGGH
LDVLKWAVMQGCRWDACTCAGAARGGHLDILRWARENHCSWDWTTCRAAA
AQGRLDILMYAREHGCPWNSHSCYEAAKAGHLHVLEWAKDNACPWSPTTC
SGAAEGGHFDILKWARARGCAWDERTCEMAAMNGRLDILRWARENGCPWS
GWKCYFAAEANNQRHVVEWI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf