prot_H-elongata_contig186276.5064.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig186276.5064.1
Unique Nameprot_H-elongata_contig186276.5064.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length58
Homology
BLAST of mRNA_H-elongata_contig186276.5064.1 vs. uniprot
Match: A0A6H5L4K3_9PHAE (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4K3_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 4.190e-25
Identity = 48/58 (82.76%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    1 RLWHQLTVALQEFVSDPANVEDGDGLVRLCTEFIARFEAKINQLRFVQILCTVGKTCT 58
            +LWHQLTVAL EFVSDPAN E G GLVRLCTEF+A FEAK+NQLRFVQILC VGKTC+
Sbjct:   28 KLWHQLTVALLEFVSDPANAEAGGGLVRLCTEFVANFEAKMNQLRFVQILCAVGKTCS 85          
BLAST of mRNA_H-elongata_contig186276.5064.1 vs. uniprot
Match: A0A836CML5_9STRA (26S proteasome subunit like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML5_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 3.130e-13
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    1 RLWHQLTVALQEFVSDPANVEDGDGLVRLCTEFIARFEAKINQLRFVQILCTVGK 55
            +LWHQLTVA+ +FV D AN + GD  +RL T+FIA+FEA+INQL+  QILC V +
Sbjct:   29 KLWHQLTVAVYDFVQDDANSQ-GDSFIRLYTDFIAKFEARINQLKLAQILCAVAR 82          
BLAST of mRNA_H-elongata_contig186276.5064.1 vs. uniprot
Match: Q2F5J1_BOMMO (26S proteasome non-ATPase regulatory subunit 13 n=2 Tax=Bombyx TaxID=7090 RepID=Q2F5J1_BOMMO)

HSP 1 Score: 56.6 bits (135), Expect = 6.920e-8
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    1 RLWHQLTVALQEFVSDPANVEDGDGLVRLCTEFIARFEAKINQLRFVQILCTV 53
            +LWHQLT+ LQEFV +PA ++ GD L++L   F+  FE+KIN L  V+I+  +
Sbjct:   39 KLWHQLTLKLQEFVKNPA-LQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHI 90          
BLAST of mRNA_H-elongata_contig186276.5064.1 vs. uniprot
Match: H9JNY3_BOMMO (26S proteasome non-ATPase regulatory subunit 13 n=1 Tax=Bombyx mori TaxID=7091 RepID=H9JNY3_BOMMO)

HSP 1 Score: 56.6 bits (135), Expect = 6.960e-8
Identity = 26/53 (49.06%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    1 RLWHQLTVALQEFVSDPANVEDGDGLVRLCTEFIARFEAKINQLRFVQILCTV 53
            +LWHQLT+ LQEFV +PA ++ GD L++L   F+  FE+KIN L  V+I+  +
Sbjct:   39 KLWHQLTLKLQEFVKNPA-LQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHI 90          
BLAST of mRNA_H-elongata_contig186276.5064.1 vs. uniprot
Match: A0A2A4JHF9_HELVI (Uncharacterized protein (Fragment) n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4JHF9_HELVI)

HSP 1 Score: 54.3 bits (129), Expect = 1.660e-7
Identity = 27/58 (46.55%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    1 RLWHQLTVALQEFVSDPANVEDGDGLVRLCTEFIARFEAKINQLRFVQILCTVGKTCT 58
            +LWHQLT+ +QE V  P+ +++GD L+ L T F++ FE KIN L  V+I+  V K  T
Sbjct:   40 KLWHQLTLKIQELVEKPS-MQEGDHLITLYTNFVSFFENKINPLSLVEIIAHVIKQYT 96          
BLAST of mRNA_H-elongata_contig186276.5064.1 vs. uniprot
Match: H3AC76_LATCH (26S proteasome non-ATPase regulatory subunit 13 n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AC76_LATCH)

HSP 1 Score: 55.5 bits (132), Expect = 1.770e-7
Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    1 RLWHQLTVALQEFVSDPANVEDGDGLVRLCTEFIARFEAKINQLRFVQILCTVGKTCT 58
            +LWHQLT+ +QEFV  P+ V  GDGL++L   FI+ FE +IN L  V+I+  V +  T
Sbjct:   34 KLWHQLTLRVQEFVQHPSFV-GGDGLIKLYENFISEFEHRINPLSLVEIVLHVVRQMT 90          
BLAST of mRNA_H-elongata_contig186276.5064.1 vs. uniprot
Match: A0A1Y1IL68_KLENI (26S proteasome regulatory subunit N9 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IL68_KLENI)

HSP 1 Score: 55.5 bits (132), Expect = 1.770e-7
Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    1 RLWHQLTVALQEFVSDPANVEDGDGLVRLCTEFIARFEAKINQLRFVQILCTVGK 55
            +LWHQLTV L++FVS  A ++ GDGL++L   FIA FE KIN L+  Q    V +
Sbjct:   31 KLWHQLTVKLEQFVSLAA-LQSGDGLIQLYHNFIADFETKINLLKLAQFAVVVSR 84          
BLAST of mRNA_H-elongata_contig186276.5064.1 vs. uniprot
Match: A0A401T601_CHIPU (26S proteasome non-ATPase regulatory subunit 13 (Fragment) n=5 Tax=Elasmobranchii TaxID=7778 RepID=A0A401T601_CHIPU)

HSP 1 Score: 55.1 bits (131), Expect = 2.400e-7
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    1 RLWHQLTVALQEFVSDPANVEDGDGLVRLCTEFIARFEAKINQLRFVQILCTVGKTCT 58
            +LWHQLTV LQ FV +P     GDGL++L   FI+ FE +IN L  V+I+  V +  T
Sbjct:   17 KLWHQLTVQLQNFVQNPC-FATGDGLIKLYENFISEFEHRINPLSLVEIVLHVVRQMT 73          
BLAST of mRNA_H-elongata_contig186276.5064.1 vs. uniprot
Match: A0A4W3GG39_CALMI (26S proteasome non-ATPase regulatory subunit 13 n=4 Tax=Chondrichthyes TaxID=7777 RepID=A0A4W3GG39_CALMI)

HSP 1 Score: 54.7 bits (130), Expect = 3.270e-7
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    1 RLWHQLTVALQEFVSDPANVEDGDGLVRLCTEFIARFEAKINQLRFVQILCTVGKTCT 58
            RLWHQLT+ +Q FV +P     GDGL++L   FI+ FE ++N L  V+I+  V +  T
Sbjct:    5 RLWHQLTMRVQNFVQNPC-FASGDGLIKLYENFISEFEHRVNPLSLVEIVLNVVRQMT 61          
BLAST of mRNA_H-elongata_contig186276.5064.1 vs. uniprot
Match: A0A6P7TG92_OCTVU (26S proteasome non-ATPase regulatory subunit 13 n=2 Tax=Octopus TaxID=6643 RepID=A0A6P7TG92_OCTVU)

HSP 1 Score: 54.7 bits (130), Expect = 3.310e-7
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    1 RLWHQLTVALQEFVSDPANVEDGDGLVRLCTEFIARFEAKINQLRFVQILCTVGK 55
            +LWHQLT+ LQ+FV +P     GDGL++L   FI+ FE +IN L  V+++  V K
Sbjct:   34 KLWHQLTLKLQDFVKEPI-FSSGDGLIKLYENFISDFEHRINSLALVELVIQVVK 87          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig186276.5064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4K3_9PHAE4.190e-2582.76PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CML5_9STRA3.130e-1360.0026S proteasome subunit like protein n=1 Tax=Tribon... [more]
Q2F5J1_BOMMO6.920e-849.0626S proteasome non-ATPase regulatory subunit 13 n=... [more]
H9JNY3_BOMMO6.960e-849.0626S proteasome non-ATPase regulatory subunit 13 n=... [more]
A0A2A4JHF9_HELVI1.660e-746.55Uncharacterized protein (Fragment) n=1 Tax=Helioth... [more]
H3AC76_LATCH1.770e-748.2826S proteasome non-ATPase regulatory subunit 13 n=... [more]
A0A1Y1IL68_KLENI1.770e-750.9126S proteasome regulatory subunit N9 n=1 Tax=Klebs... [more]
A0A401T601_CHIPU2.400e-748.2826S proteasome non-ATPase regulatory subunit 13 (F... [more]
A0A4W3GG39_CALMI3.270e-744.8326S proteasome non-ATPase regulatory subunit 13 n=... [more]
A0A6P7TG92_OCTVU3.310e-747.2726S proteasome non-ATPase regulatory subunit 13 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10539:SF026S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13coord: 1..55
IPR03529826S Proteasome non-ATPase regulatory subunit 13PANTHERPTHR1053926S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13coord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig186276contigH-elongata_contig186276:1046..1219 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig186276.5064.1mRNA_H-elongata_contig186276.5064.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig186276 1046..1219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig186276.5064.1 ID=prot_H-elongata_contig186276.5064.1|Name=mRNA_H-elongata_contig186276.5064.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
RLWHQLTVALQEFVSDPANVEDGDGLVRLCTEFIARFEAKINQLRFVQIL
CTVGKTCT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035298PSMD13