prot_H-elongata_contig18602.5053.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18602.5053.1
Unique Nameprot_H-elongata_contig18602.5053.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length174
Homology
BLAST of mRNA_H-elongata_contig18602.5053.1 vs. uniprot
Match: D7FXR8_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR8_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 1.210e-68
Identity = 108/176 (61.36%), Postives = 133/176 (75.57%), Query Frame = 0
Query:    1 VRLKSNVVNAEIFDNTIQDCGIHDFQFESEDKNGEGVYIGTSSNQWVDETPDICNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCY---GGSFGLRNNIATNCMGAGVRLGGWDVDGYAHGQGNHVYGNDIFDCSEGSIKVETEGQGDVCGNTCEDGNCELIG 173
            VRLK +V+NA++  NTI +CG+HD+ F S DKNGEGVYIGTSS QW +   D CN N+V GN IST+GNECV+IKEG++GN +E+NICS QLD  SGCY   G     R N+ T+CMGAGVRLGGW+VDG+ +G GN VYGND     EG++KV    QGD+CGNTCEDG+C L+G
Sbjct:  172 VRLKDSVINAQVMGNTISNCGVHDYMFNSGDKNGEGVYIGTSSTQWTNGE-DTCNDNLVSGNRISTSGNECVDIKEGASGNVIEDNICSEQLDAESGCYDSRGDGNTFRYNVGTDCMGAGVRLGGWEVDGHQYGVGNSVYGNDFNAVGEGALKVLVGEQGDICGNTCEDGSCSLVG 346          
BLAST of mRNA_H-elongata_contig18602.5053.1 vs. uniprot
Match: D7FXR9_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR9_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 1.620e-68
Identity = 106/176 (60.23%), Postives = 131/176 (74.43%), Query Frame = 0
Query:    1 VRLKSNVVNAEIFDNTIQDCGIHDFQFESEDKNGEGVYIGTSSNQWVDETPDICNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCY---GGSFGLRNNIATNCMGAGVRLGGWDVDGYAHGQGNHVYGNDIFDCSEGSIKVETEGQGDVCGNTCEDGNCELIG 173
            VRLK +VVNA++  NTI +CG+HD+ F SEDKNGEGVYIGTSS QW +   D CNGNVV  N+IST+GNECV+IKEGS+GN +E+N CS+QLD  SGCY   G     R N+ + C GAGVRLGGW+VDG+ +G  N VYGND +    G++KV    QGD+CGNTCE+G+C L G
Sbjct:  172 VRLKDSVVNAQVTGNTISNCGVHDYMFNSEDKNGEGVYIGTSSTQWTNGE-DTCNGNVVSRNLISTSGNECVDIKEGSSGNVIEDNFCSDQLDAESGCYDSRGDGNTFRYNVGSECTGAGVRLGGWEVDGHQYGVNNSVYGNDFYAVGVGALKVLVGEQGDICGNTCEEGSCSLTG 346          
BLAST of mRNA_H-elongata_contig18602.5053.1 vs. uniprot
Match: D7FZD2_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD2_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 2.010e-64
Identity = 100/176 (56.82%), Postives = 129/176 (73.30%), Query Frame = 0
Query:    1 VRLKSNVVNAEIFDNTIQDCGIHDFQFESEDKNGEGVYIGTSSNQWVDETPDICNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCY---GGSFGLRNNIATNCMGAGVRLGGWDVDGYAHGQGNHVYGNDIFDCSEGSIKVETEGQGDVCGNTCEDGNCELIG 173
            VRLK  V NA+IF NTI +CGIHD+ FES D NG+GV IGTSS++W D   D+C  N+V GN+I T+ NECV++KEG+ GN +E+N+C NQLD NSGCY   G     RNN  ++C+GAGVRLGGW+VDG+ +G GN VY ND  D   G++K+  +GQG +CGNTC   +C+LIG
Sbjct:  133 VRLKDGVTNAKIFSNTITNCGIHDYMFESGDMNGQGVCIGTSSDEWPDGEEDVCTNNLVAGNVIDTSANECVDVKEGAYGNVIEDNMCYNQLDINSGCYNSRGNDNIFRNNAGSDCLGAGVRLGGWEVDGFQYGVGNSVYDNDFNDVGFGALKIMVDGQGTICGNTCAGDDCQLIG 308          
BLAST of mRNA_H-elongata_contig18602.5053.1 vs. uniprot
Match: A0A6H5KT05_9PHAE (Beta_helix domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT05_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 1.520e-55
Identity = 92/170 (54.12%), Postives = 115/170 (67.65%), Query Frame = 0
Query:    1 VRLKSNVVNAEIFDNTIQDCGIHDFQFESEDKNGEGVYIGTSSNQWVDETPDICNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYGGSFG---LRNNIATNCMGAGVRLGGWDVDGYAHGQGNHVYGNDIFDCSEGSIKVETEGQGDVCGNTCEDG 167
            VRLKS +V A I DN IQDCG+ DF + +  KNGEG+Y+GTSS QW D  PD CN N + GN I+ NGNECV+IKEGSTG  VEEN CS QLD++SGC+G        R N A++C+G GVR+GGW+VDG+ +GQ N +Y N       G +      QG VCGN+C+ G
Sbjct:  145 VRLKSFIVGAVISDNVIQDCGVRDFVYGNSGKNGEGIYVGTSSTQWSDG-PDECNDNTITGNTITPNGNECVDIKEGSTGTIVEENTCSGQLDEDSGCFGSRGDGNVFRYNTASDCLGVGVRIGGWEVDGHKYGQDNSIYENSFTRAESGGLSFFALPQGKVCGNSCQGG 313          
BLAST of mRNA_H-elongata_contig18602.5053.1 vs. uniprot
Match: A0A6H5L3G3_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G3_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 3.830e-41
Identity = 80/171 (46.78%), Postives = 110/171 (64.33%), Query Frame = 0
Query:    1 VRLKSNVVNAEIFDNTIQDCGIHDFQFESEDKNGEGVYIGTSSNQWV-----DETPDICNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYGGSFGLRNNIATNCM----GAGVRLGGWDVDGYAHGQGNHVYGNDIFDCSEGSIKVETEGQGDVCGN 162
            +RL+ +V NAE++ N I DCGI+DF+ + + KNGEGVY+GTSS QW      D+ PD+C GN+++GN I T GNE +++KEG+    +E N    Q D +SG  G S G R+ I  N +    GAGVRLGG  VDG  +G+ N VYGN + DC   ++KV  + QG +C N
Sbjct:  172 IRLRDHVTNAEVYSNHITDCGIYDFREDGDGKNGEGVYVGTSSKQWDSDKNWDDVPDVCMGNIIRGNYIRTRGNEGIDVKEGTVDTLIEYNEVYMQYDDDSGGIG-SRGDRSIIRYNHIEDTDGAGVRLGGHTVDGIEYGKNNQVYGNTMVDCRHSAVKVMVDPQGQICNN 341          
BLAST of mRNA_H-elongata_contig18602.5053.1 vs. uniprot
Match: UPI00036AEC55 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00036AEC55)

HSP 1 Score: 145 bits (367), Expect = 3.390e-39
Identity = 83/174 (47.70%), Postives = 106/174 (60.92%), Query Frame = 0
Query:    1 VRLKSNVVNAEIFDNTIQDCGIHDFQFESEDKNGEGVYIGTSSNQWVDET-----PDICNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCY---GGSFGLRNNIATNCMGAGVRLGGWDVDGYAHGQGNHVYGNDIFDCSEGSIKVETEGQGDVCGNTCED 166
            VRL+  V  AEIFDNT  +CG++DF+F +  KNGE +Y+GTSSNQW D       PD  N N +  N   TNGNECV+IKEG+  N VE NICS Q D NS  +   G     R N++ +  GAGVRLGG  VDG  +G  N VYGN +++ ++  +K+    Q  VCGN   D
Sbjct:  174 VRLRYYVTEAEIFDNTFYNCGVYDFKFNNGGKNGEAIYVGTSSNQWDDGKNPTGGPDPSNHNWIHHNKFLTNGNECVDIKEGAEYNLVEYNICSGQQDPNSAGFDSRGDHNIFRYNVSHDNKGAGVRLGGNTVDGRQYGVNNQVYGNLLYNNAQAGVKLMAAPQEKVCGNPTSD 347          
BLAST of mRNA_H-elongata_contig18602.5053.1 vs. uniprot
Match: A0A261GHV7_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GHV7_9GAMM)

HSP 1 Score: 143 bits (361), Expect = 3.190e-38
Identity = 84/174 (48.28%), Postives = 105/174 (60.34%), Query Frame = 0
Query:    1 VRLKSNVVNAEIFDNTIQDCGIHDFQFESEDKNGEGVYIGTSSNQWVD-----ETPDICNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYG--GSFGL-RNNIATNCMGAGVRLGGWDVDGYAHGQGNHVYGNDIFDCSEGSIKVETEGQGDVCGNTCED 166
            VRL+ +V  AEIF NT  +CG +DFQF+   KNGE +YIGTSS QW D       PD  N N V  N   T GNECV+IKEG+  N VE NIC+ Q D  SG +   G + + R N++ +  GAG+R+GG  V+G  +G  N VYGN IFD     IK+ T  Q  VCGN+  D
Sbjct:  180 VRLRYHVTRAEIFGNTFYNCGAYDFQFDGRGKNGEAIYIGTSSEQWDDGKNPSADPDHSNYNWVHHNYFLTRGNECVDIKEGAAHNLVENNICAGQQDPASGGFDARGDYNIIRYNVSYSNKGAGIRVGGNMVNGRQYGVFNEVYGNKIFDNDNSGIKIMTYPQRYVCGNSMTD 353          
BLAST of mRNA_H-elongata_contig18602.5053.1 vs. uniprot
Match: A0A6H5L8H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H5_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 5.360e-38
Identity = 79/171 (46.20%), Postives = 109/171 (63.74%), Query Frame = 0
Query:    1 VRLKSNVVNAEIFDNTIQDCGIHDFQFESEDKNGEGVYIGTSSNQWV-----DETPDICNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYGGSFGLRNNIATNCM----GAGVRLGGWDVDGYAHGQGNHVYGNDIFDCSEGSIKVETEGQGDVCGN 162
            +RL+ +V  AE++ N I DCGI+D++ + + KNGEGVY+GTSSNQW      D+ PD+C GN+++ N I T GNE +++KEGS    +E N    Q D +SG  G S G R+ I  N +    GAGVRLGG  VDG  +G+ N VYGN + DC   ++KV  + QG +C N
Sbjct:  178 IRLRDHVTYAEVYSNYIIDCGIYDYREDGDGKNGEGVYVGTSSNQWDSDNNWDDVPDVCMGNIIRDNYIRTRGNEGIDVKEGSVDTLIEYNEVYMQYDDDSGGIG-SRGDRSIIRYNHIEDTDGAGVRLGGHTVDGIEYGKNNQVYGNTMVDCRHSAVKVMVDPQGQICDN 347          
BLAST of mRNA_H-elongata_contig18602.5053.1 vs. uniprot
Match: A0A261GV77_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GV77_9GAMM)

HSP 1 Score: 138 bits (347), Expect = 3.280e-36
Identity = 79/174 (45.40%), Postives = 102/174 (58.62%), Query Frame = 0
Query:    1 VRLKSNVVNAEIFDNTIQDCGIHDFQFESEDKNGEGVYIGTSSNQW-----VDETPDICNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCY---GGSFGLRNNIATNCMGAGVRLGGWDVDGYAHGQGNHVYGNDIFDCSEGSIKVETEGQGDVCGNTCED 166
            VR++  V  AEIF NT  +CG+ DFQF    KNGE +Y+GT+  QW     +   PD  + N +  N   TNGNECV+IK+GS  N VE NIC+ Q D NSG +   G    LRNNI+    GAG+R+GG  V+GY +G  N VY N  FD    ++K+    Q +VCGN   D
Sbjct:  176 VRIRYFVSEAEIFGNTFYNCGVLDFQFNDGTKNGEAIYVGTAPGQWGNGKNLTSDPDHSHHNWIHDNSFLTNGNECVDIKDGSEYNLVENNICTGQRDPNSGGFNIQGDRNILRNNISFANNGAGIRIGGHMVNGYQYGVENDVYSNVFFDNGNAAVKMMAYPQSNVCGNDSYD 349          
BLAST of mRNA_H-elongata_contig18602.5053.1 vs. uniprot
Match: Q6XM06_9PHYC (FirrV-1-B30 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM06_9PHYC)

HSP 1 Score: 142 bits (357), Expect = 3.920e-36
Identity = 79/181 (43.65%), Postives = 104/181 (57.46%), Query Frame = 0
Query:    1 VRLKSNVVNAEIFDNTIQDCGIHDFQFESEDKNGEGVYIGTSSNQWVD-----ETPDICNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYGG---SFGLRNNIATNCMGAGVRLGGWDVDGYAHGQGNHVYGNDIFDCSEGSIKVETEGQGDVCGNTCEDGNCELIG 173
            +RL+S V +AE+  N I+ CG HD+ F+   KNGE +Y+GTSSNQW D       PD      +  N+I T  NECV++KEGST   VE N CSNQLD NS  +         R N  +NC GAG+R+GG  +DG  +G+ N  YGN + + +  +IKVET  Q   C N C    C + G
Sbjct:  177 IRLRSFVTHAEVTGNRIERCGRHDYLFDGAGKNGEAIYVGTSSNQWNDGKNSKSGPDKTKYIWIHDNVIDTQANECVDVKEGSTDVLVEYNACSNQLDTNSAGFDSRTDDVTFRYNEVSNCAGAGIRIGGHKIDGKTYGENNEAYGNVMRNNAYSAIKVETGKQHVFCQNDCGKEGCTVKG 357          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18602.5053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXR8_ECTSI1.210e-6861.36FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FXR9_ECTSI1.620e-6860.23FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FZD2_ECTSI2.010e-6456.82FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KT05_9PHAE1.520e-5554.12Beta_helix domain-containing protein n=2 Tax=Ectoc... [more]
A0A6H5L3G3_9PHAE3.830e-4146.78Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
UPI00036AEC553.390e-3947.70right-handed parallel beta-helix repeat-containing... [more]
A0A261GHV7_9GAMM3.190e-3848.28DUF1565 domain-containing protein n=1 Tax=Hahella ... [more]
A0A6H5L8H5_9PHAE5.360e-3846.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A261GV77_9GAMM3.280e-3645.40DUF1565 domain-containing protein n=1 Tax=Hahella ... [more]
Q6XM06_9PHYC3.920e-3643.65FirrV-1-B30 n=1 Tax=Feldmannia irregularis virus a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 100..122
e-value: 5300.0
score: 2.1
coord: 131..153
e-value: 590.0
score: 8.8
coord: 7..41
e-value: 230.0
score: 10.6
coord: 54..76
e-value: 33.0
score: 13.4
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..171
e-value: 2.6E-9
score: 38.6
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 9..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18602contigH-elongata_contig18602:5535..7216 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18602.5053.1mRNA_H-elongata_contig18602.5053.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18602 5535..7216 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18602.5053.1 ID=prot_H-elongata_contig18602.5053.1|Name=mRNA_H-elongata_contig18602.5053.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=174bp
VRLKSNVVNAEIFDNTIQDCGIHDFQFESEDKNGEGVYIGTSSNQWVDET
PDICNGNVVKGNIISTNGNECVEIKEGSTGNFVEENICSNQLDKNSGCYG
GSFGLRNNIATNCMGAGVRLGGWDVDGYAHGQGNHVYGNDIFDCSEGSIK
VETEGQGDVCGNTCEDGNCELIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence