mRNA_H-elongata_contig185880.5040.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig185880.5040.1 vs. uniprot
Match: D7G548_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G548_ECTSI) HSP 1 Score: 267 bits (682), Expect = 1.240e-82 Identity = 126/142 (88.73%), Postives = 129/142 (90.85%), Query Frame = 1
Query: 1 PYGLMPLLDEEVKIPKGSDQGWLSKSKTHNADHPCLKPAGSNPNRFVVVHYAGDVPYEIGGFVATNKDDLFRDLYDLVSGAASDITRSLFPPKVRSCLCLDNNPRRLTTLGFKFRKALLDLMVLVDTCEPWYIRCIKPNDQK 426
PYGLMPLLDEEVKIPKGSD GWLSK KTHNA HPCL+PAGSNPNRFVVVHYAG+VPYEIGGFV TNKDDLFRDLYDLVSGA SD+TRSLFPPK DNNPRRLTTLGFKFRKALLDLM LVDTCEPWYIRCIKPNDQK
Sbjct: 429 PYGLMPLLDEEVKIPKGSDGGWLSKCKTHNAQHPCLRPAGSNPNRFVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVSGAQSDVTRSLFPPK-------DNNPRRLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQK 563
BLAST of mRNA_H-elongata_contig185880.5040.1 vs. uniprot
Match: A0A6H5KSK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK5_9PHAE) HSP 1 Score: 267 bits (682), Expect = 2.910e-80 Identity = 126/142 (88.73%), Postives = 129/142 (90.85%), Query Frame = 1
Query: 1 PYGLMPLLDEEVKIPKGSDQGWLSKSKTHNADHPCLKPAGSNPNRFVVVHYAGDVPYEIGGFVATNKDDLFRDLYDLVSGAASDITRSLFPPKVRSCLCLDNNPRRLTTLGFKFRKALLDLMVLVDTCEPWYIRCIKPNDQK 426
PYGLMPLLDEEVKIPKGSD GWLSK KTHNA HPCL+PAGSNPNRFVVVHYAG+VPYEIGGFV TNKDDLFRDLYDLVSGA SD+TRSLFPPK DNNPRRLTTLGFKFRKALLDLM LVDTCEPWYIRCIKPNDQK
Sbjct: 545 PYGLMPLLDEEVKIPKGSDGGWLSKCKTHNAQHPCLRPAGSNPNRFVVVHYAGEVPYEIGGFVTTNKDDLFRDLYDLVSGAQSDVTRSLFPPK-------DNNPRRLTTLGFKFRKALLDLMELVDTCEPWYIRCIKPNDQK 679
BLAST of mRNA_H-elongata_contig185880.5040.1 vs. uniprot
Match: A0A836C908_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C908_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.960e-59 Identity = 97/143 (67.83%), Postives = 112/143 (78.32%), Query Frame = 1
Query: 1 PYGLMPLLDEEVKIPKGSDQGWLSKSKTHNADHPCLKPA-GSNPNRFVVVHYAGDVPYEIGGFVATNKDDLFRDLYDLVSGAASDITRSLFPPKVRSCLCLDNNPRRLTTLGFKFRKALLDLMVLVDTCEPWYIRCIKPNDQK 426
PYGLMPLLDEEVK+P+G D WL K K HNA+HP L G NPNRF V HYAGDV Y+ GGFV TN+D+LFRDLYD++S + + IT+++FPPK D+NPRR TTLG KFR+ALLDLM LVD CEPWYIRCIKPNDQK
Sbjct: 649 PYGLMPLLDEEVKLPRGGDAAWLGKCKQHNAEHPALAGTPGGNPNRFTVRHYAGDVGYDCGGFVDTNRDNLFRDLYDIMSSSRAPITKAVFPPK-------DSNPRRTTTLGEKFRRALLDLMALVDACEPWYIRCIKPNDQK 784
BLAST of mRNA_H-elongata_contig185880.5040.1 vs. uniprot
Match: A0A7R9UA42_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UA42_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.440e-39 Identity = 73/144 (50.69%), Postives = 98/144 (68.06%), Query Frame = 1
Query: 1 PYGLMPLLDEEVKIPKGSDQGWLSKSKTHNADHPCLKPA--GSNPNRFVVVHYAGDVPYEIGGFVATNKDDLFRDLYDLVSGAASDITRSLFPPKVRSCLCLDNNPRRLTTLGFKFRKALLDLMVLVDTCEPWYIRCIKPNDQK 426
P+GLM LLDEEV++P+GSD W+ K T +A +P + A G + + F + HYAG+V Y GF+ NKD L+R++YD++S A +TR +FPPK D NPRR+ TLG KFR L +LM +VD CEP+YIRCIKPN +K
Sbjct: 556 PFGLMVLLDEEVRLPQGSDSRWIQKCTTKHASNPNWQEARRGQSADVFAIQHYAGNVQYSSLGFMEKNKDSLYRNMYDMMSAAPHPLTREVFPPK-------DANPRRVQTLGEKFRSQLRNLMTVVDRCEPYYIRCIKPNHEK 692
BLAST of mRNA_H-elongata_contig185880.5040.1 vs. uniprot
Match: A0A7S1U0W2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0W2_9STRA) HSP 1 Score: 135 bits (339), Expect = 5.370e-34 Identity = 71/144 (49.31%), Postives = 89/144 (61.81%), Query Frame = 1
Query: 1 PYGLMPLLDEEVKIPKGSDQGWLSKSKT-HNADHPCLKPAGSNPNR-FVVVHYAGDVPYEIGGFVATNKDDLFRDLYDLVSGAASDITRSLFPPKVRSCLCLDNNPRRLTTLGFKFRKALLDLMVLVDTCEPWYIRCIKPNDQK 426
P G++ LLDEE+++P+GSD WLSK T H AD + A F + HYAG V Y GF+ NKD L+R++YD++S +TR +FPP +D NPRRL TLG KFR L LM VD CEP YIRCIKPN +K
Sbjct: 244 PMGILILLDEEIRLPRGSDDRWLSKCGTRHAADANWIDAANDQARTMFTIQHYAGRVQYSSEGFMEKNKDALYRNMYDMMSRVPHPLTREVFPP-------MDANPRRLRTLGEKFRGQLKALMSTVDACEPHYIRCIKPNHKK 380
BLAST of mRNA_H-elongata_contig185880.5040.1 vs. uniprot
Match: A0A7S4L0Q8_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4L0Q8_9EUKA) HSP 1 Score: 122 bits (306), Expect = 1.540e-29 Identity = 60/142 (42.25%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 1 PYGLMPLLDEEVKIPKGSDQGWLSKSKTHNADHPCLKPAGSNPNRFVVVHYAGDVPYEIGGFVATNKDDLFRDLYDLVSGAASDITRSLFPPKVRSCLCLDNNPRRLTTLGFKFRKALLDLMVLVDTCEPWYIRCIKPNDQK 426
P G++ LDEE+K+P+GSD +L+K H+ +P K ++ + F+V+HYAG+V Y+ F+ NKD L +DL+DL++ + S +SLFP +S R +LGF+FR+ L DLM ++ EP YIRC+KPND K
Sbjct: 546 PKGILVTLDEEIKVPRGSDTTFLNKINKHHGANPHFKEIRTSKSEFMVIHYAGEVLYDSYTFLEKNKDTLTQDLFDLITSSRSSFLKSLFPDINQS------GSDRKVSLGFQFRRQLDDLMKTLNQTEPHYIRCVKPNDDK 681
BLAST of mRNA_H-elongata_contig185880.5040.1 vs. uniprot
Match: R1CMV8_EMIHU (Myosin motor domain-containing protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CMV8_EMIHU) HSP 1 Score: 116 bits (291), Expect = 1.310e-27 Identity = 65/146 (44.52%), Postives = 85/146 (58.22%), Query Frame = 1
Query: 1 PYGLMPLLDEEVKIPKGSDQGWLSKSKTHNADHPCL---KPAG-SNPNRFVVVHYAGDVPYEIGGFVATNKDDLFRDLYDLVSGAASDITRSLFPPKVRSCLCLDNNPRRLTTLGFKFRKALLDLMVLVDTCEPWYIRCIKPNDQK 426
P+GL+ LLDEEV++P+GSD WL K +ADHP K G + + F V HYAG+V Y G V N D L R LYDL+SG++ +TR+ FPPK D R+ T+G ++R L LM V P +IRC+KPN K
Sbjct: 446 PFGLLNLLDEEVRVPQGSDAKWLEKVSQRHADHPAFGAPKQQGKARRDFFCVRHYAGEVRYSADGLVEKNADRLSRGLYDLLSGSSCGLTRACFPPKD------DAIAGRVRTVGEEWRSQLGGLMQKVGRMSPLFIRCVKPNQHK 585
BLAST of mRNA_H-elongata_contig185880.5040.1 vs. uniprot
Match: A0A564YHL9_HYMDI (Myosin motor domain-containing protein (Fragment) n=2 Tax=Hymenolepididae TaxID=6214 RepID=A0A564YHL9_HYMDI) HSP 1 Score: 107 bits (268), Expect = 1.630e-24 Identity = 54/143 (37.76%), Postives = 88/143 (61.54%), Query Frame = 1
Query: 1 PYGLMPLLDEEVKIPKGSDQGWLSK-SKTHNADHPCLKPAGSNPNRFVVVHYAGDVPYEIGGFVATNKDDLFRDLYDLVSGAASDITRSLFPPKVRSCLCLDNNPRRLTTLGFKFRKALLDLMVLVDTCEPWYIRCIKPNDQK 426
P ++ L+DEE + PKGSD +LSK + H + ++ + RF +VH+AG V Y + GF+ N+D DL D+++ + +D R LF ++ +N PR LT LG +F+K+L LM ++++C P+++RCIKPN+ K
Sbjct: 422 PLNVLALVDEESRFPKGSDISFLSKLNARHGETNNYIRALSTVETRFGIVHFAGPVYYNVEGFLEKNRDTFNHDLLDVINKSNNDFLRKLFEKRLHLS---ENRPRSLT-LGMQFKKSLERLMSIINSCHPFFVRCIKPNEFK 560
BLAST of mRNA_H-elongata_contig185880.5040.1 vs. uniprot
Match: A0A158QEK3_HYMDI (Uncharacterized protein n=6 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A158QEK3_HYMDI) HSP 1 Score: 107 bits (268), Expect = 2.040e-24 Identity = 54/143 (37.76%), Postives = 88/143 (61.54%), Query Frame = 1
Query: 1 PYGLMPLLDEEVKIPKGSDQGWLSK-SKTHNADHPCLKPAGSNPNRFVVVHYAGDVPYEIGGFVATNKDDLFRDLYDLVSGAASDITRSLFPPKVRSCLCLDNNPRRLTTLGFKFRKALLDLMVLVDTCEPWYIRCIKPNDQK 426
P ++ L+DEE + PKGSD +LSK + H + ++ + RF +VH+AG V Y + GF+ N+D DL D+++ + +D R LF ++ +N PR LT LG +F+K+L LM ++++C P+++RCIKPN+ K
Sbjct: 470 PLNVLALVDEESRFPKGSDISFLSKLNARHGETNNYIRALSTVETRFGIVHFAGPVYYNVEGFLEKNRDTFNHDLLDVINKSNNDFLRKLFEKRLHLS---ENRPRSLT-LGMQFKKSLERLMSIINSCHPFFVRCIKPNEFK 608
BLAST of mRNA_H-elongata_contig185880.5040.1 vs. uniprot
Match: A0A2R5GW22_9STRA (Myosin-11 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GW22_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.710e-24 Identity = 55/145 (37.93%), Postives = 88/145 (60.69%), Query Frame = 1
Query: 1 PYGLMPLLDEEVKIPKGSDQGWLSKSKT-HNADHPCLKPAGSNPNR--FVVVHYAGDVPYEIGGFVATNKDDLFRDLYDLVSGAASDITRSLFPPKVRSCLCLDNNPRRLTTLGFKFRKALLDLMVLVDTCEPWYIRCIKPNDQK 426
P GL+ +LD+ ++P+ +D+G+++K+ T H++ + + F + HYAGDV Y GF+A NKD LF+DLYD+++ + S T ++FP +D N R +LG +FRK L LM ++ + YIRC+KPND+K
Sbjct: 686 PVGLLLMLDDMNRMPRSTDEGFVAKADTNHSSSRSYVSSTITRKGNKCFTIKHYAGDVVYNADGFLAKNKDLLFKDLYDVMTASTSPKTAAMFP-------AMDKNSRAKYSLGAQFRKQLDQLMSILRATQTHYIRCVKPNDEK 823 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig185880.5040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig185880.5040.1 >prot_H-elongata_contig185880.5040.1 ID=prot_H-elongata_contig185880.5040.1|Name=mRNA_H-elongata_contig185880.5040.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=138bp MPLLDEEVKIPKGSDQGWLSKSKTHNADHPCLKPAGSNPNRFVVVHYAGDback to top mRNA from alignment at H-elongata_contig185880:127..1151- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig185880.5040.1 ID=mRNA_H-elongata_contig185880.5040.1|Name=mRNA_H-elongata_contig185880.5040.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1025bp|location=Sequence derived from alignment at H-elongata_contig185880:127..1151- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig185880:127..1151- >mRNA_H-elongata_contig185880.5040.1 ID=mRNA_H-elongata_contig185880.5040.1|Name=mRNA_H-elongata_contig185880.5040.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=828bp|location=Sequence derived from alignment at H-elongata_contig185880:127..1151- (Himanthalia elongata Himel1 dioecious)back to top |