mRNA_H-elongata_contig18547.5016.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig18547.5016.1
Unique NamemRNA_H-elongata_contig18547.5016.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A6H5KTT2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTT2_9PHAE)

HSP 1 Score: 426 bits (1095), Expect = 1.160e-142
Identity = 270/490 (55.10%), Postives = 333/490 (67.96%), Query Frame = 1
Query:    1 MVLPTQGMMLSERPSEKAGDSTATAGPGVALAATGSIGNYKGVMLCNRPFTGTAMAAKGGAVV--AAAAKNVFLTGVVKSELGYSGRALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIP-RLRSNEGRNCHNEKGEKVHSEL-----FTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGDDNSDNAS----AIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDNMSVARTALSEGGWSLRSIHSTRSLAAVAEKARGSI---SAARAEGVREAPSRLEEG--PNCNGVEPADVAVNDIVVVTHKDDGGLRLGGKNNISNLPYIRRNPAV 1419
            M +P+QG M SERPS              ALA  GSIGNYKGVMLCNRPF GTA AAKGG     AAA K+ F+TG VKSE+G++ ++LQT+   RKRVK+ETALTRH++WLADLQLTK  LEEQYM D +KKEE K+RFA+REAR+R+  RE         D ++     NEE G +AW IGLDDDV+     K  + P  + + + R    E+G     EL       +R D +EL+A EKRRKRDG PCRPKWAMTE  A  EDEL HE+EL++LL FT+GLDF +YI+DAE+QSMI+Q+K+RI+E+E QP+VDE   +D +D +       D D LDE E+R  AK+MKLT KNL  +E    +AS  TG   +++  DDN+S+ARTALSEGG S+RSIHSTRSLAAVAEKAR SI             AP+RLE+G     +G    D+ VNDIVVVTH+DDGGLR GGKN +SNLPYIRRNPA+
Sbjct:    1 MSVPSQGTMFSERPSGA-----------TALAGAGSIGNYKGVMLCNRPFAGTAAAAKGGGDNGGAAAGKHAFVTGKVKSEVGFADKSLQTEKLLRKRVKRETALTRHRKWLADLQLTKQALEEQYMEDLQKKEENKRRFAQREARMRQMTRELGAA---ASDRKIGQGYGNEEQGSKAWAIGLDDDVEPETTTKNHNRPCSVLNADDRLDGKEEGGSSRPELEEEEGVGNRIDPSELKAVEKRRKRDGKPCRPKWAMTEAEAQVEDELKHEEELEELLQFTQGLDFGRYIKDAEVQSMIDQVKRRILELEGQPEVDEESPEDENDGSGDRGQGQDDDPLDEAEIRMQAKVMKLTDKNLATLE----DASDRTGA-RNLREEDDNISIARTALSEGGRSVRSIHSTRSLAAVAEKARVSIIRGGXXXXXXXXXAPARLEKGLSSTLSGGGNRDMPVNDIVVVTHQDDGGLRRGGKNTVSNLPYIRRNPAL 471          
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A836C827_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C827_9STRA)

HSP 1 Score: 228 bits (582), Expect = 1.990e-66
Identity = 191/484 (39.46%), Postives = 264/484 (54.55%), Query Frame = 1
Query:   13 TQGMMLSERPSEKAGDS-TATAGPGVALAATGSIGNYKGVMLCNRPFTGTAMAAKG----GAVVAAAAKNVFLTGVVKSELGYSGR--ALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNV---RNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGD----DNSDNASAIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDNMSVARTALSEGGWSLRSIHSTRSLAAVAEKARGS-ISAARAEGVREAPSRLEEGPNCNGVEPADVAVNDIVVVTHKDDGGLRLGGKNNISNLPYIRRNPAV 1419
            TQGMML+ERPS  + D+ TA   P        SIGNYKGVMLCNRPF G + AA+     GAV A A +  F+TGVV++E+GYS    A +      K+V+K+ AL RH+RWLADLQ TK  LE+QY+ +  +KEE  ++F+ERE+R+RR                  G+V   R+ E    A   G DD+ + +                        +K   +   S  ++ + R     RK      RPKWA+TE  A A D+   + E+++LL FT+ LDF+KY+RDAE+Q+MI+Q+K+RI E+E++             +N D   A DG + D+ E     +I++LT  NL    KR   A  G   D         +S+ART L+EGG S+RS+HS +SLAAV E+A+   ++ A+ +  +E  S     P  N  E   V    + V  HKDDGGLRLGGKN +SNLPY+ RNPAV
Sbjct:    4 TQGMMLAERPSGLSNDAGTAGGAP--------SIGNYKGVMLCNRPFGGVSAAARETREKGAVSATAGR--FVTGVVQTEVGYSSAQAASKGTRVVCKKVRKDNALARHRRWLADLQRTKDALEKQYIEELEQKEEAARKFSERESRMRRMY-------------IATGSVYPDRHHEPHAPADVAGSDDEREHIYDE---------------------DKAQQQSHGSSPEADDHRED---RKHKSASARPKWALTEAKAAAVDQEAEDAEVEELLAFTKSLDFDKYLRDAEVQAMIDQVKRRIQELEREAAAXXXXXXXXEGENGDPDEASDGAE-DDAEAAMAERILRLTAANL----KRVDGAPDGDEPDDTASV----LSMARTVLTEGGRSVRSVHSAKSLAAVVERAQTRLVTVAQQQQQQEGRS-----PVANVRESGFV----VKVAEHKDDGGLRLGGKNTVSNLPYMHRNPAV 422          
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A7S2WRE5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WRE5_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.880e-52
Identity = 171/471 (36.31%), Postives = 234/471 (49.68%), Query Frame = 1
Query:   16 QGMMLSERPSEKAGDSTATAGPGVALAATGSIGNYKGVMLCNRPFTGTAMAAKGGAVVAAAAKNVFLTGVVKSELGYSGRALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTD---SAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGDDNSDNASAIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDNMSVARTALSEGGWSLRSIHSTRSLAAVAEKARGSISAARAEGVREAPSRLEEGPNCNGVEPADVAVNDIVVVTHKDDGGLRLGGKNNISNLPYIRRNPAV 1419
            QGMML+ERP     D++ ++G  +  + + SIGNYKGVMLCNRPF G   AA+  A     AK  F+ G V S +G  GR  ++D    KR KKETALTRH++WLA+LQ TK ELE+ Y+ +  +KEE+KKRF  REAR+R    +    E    +  V         G     +    D  E    KAG +        +               +S  +   +  L AAEKRR++ G   RP WA+TE  A+   E   E +  +LL F + LDFEKYI D EIQ+M++Q+K RI E+E     DE Y                + +EVR +A+   LT + +  ++     A  G  VD D    +D MSVA   LSE    L ++HS +S+AA+  K   +IS                       EP   AV +  +V+H DD G RL  K+ I  LPY+ RNP+V
Sbjct:   65 QGMMLAERPQ----DTSISSGM-IGSSPSVSIGNYKGVMLCNRPFAGVQAAAQHQAS-GGPAKAAFVCGNVPSAIGAGGR--RSDLSLVKRTKKETALTRHRKWLAELQRTKVELEKNYLEELHQKEESKKRFMAREARMRALVTQANAAEPKAEEAAV-------ATGGALAAMAAAKDAAEF-DGKAGPLEGKGEESPKASAXXXXXXXXXXXLSSAAEGDAAVALAAAEKRREKQGKVSRPMWALTEDKAHEASEKKEEDDAMELLAFAQNLDFEKYIDDMEIQTMMDQVKARIGELEIM--ADEEY----------------EASEVRGEARPHTLTAEKIAQLQ-----AKYGVSVDEDKD--EDTMSVASRVLSENKG-LGAVHSQKSVAAITAKKMEAISE----------------------EPISSAVPEPRIVSHPDDEGTRLANKSTIQKLPYMNRNPSV 471          
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A7S2FR48_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FR48_9STRA)

HSP 1 Score: 157 bits (398), Expect = 4.410e-40
Identity = 138/376 (36.70%), Postives = 198/376 (52.66%), Query Frame = 1
Query:  106 SIGNYKGVMLCNRPFTGTAMAAKGGAVVAAAAKNVFLTGVVKSELGYSGRALQTDNQPR------KRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIR---RAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGDDNSDNASAIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDN-MSVARTALSEGGWSLRSIHSTRSLAAVA 1203
            SIGNYKGVMLCNRPF G A AA+        AK  F+ G V   +G +         PR      KR KKETAL+RHK+WL DLQ TK++LE+ Y+ + ++KEE KKRF ERE+++R   RA+R+        GD+ V          + A           ++ + A  +P     E  +   E  E    E+  +     EL AAEK R++ G   RP WA+TE  A    E   E +  +LL F + LDF+KYI D E+Q+MI+Q+K RI E+E   D D                  L+  EV+ +A+   LT +++R ++++        GV ++ +PADD+ +SVA++ LS     L  +HST+S+AAVA
Sbjct:   19 SIGNYKGVMLCNRPFAGVAAAAQNAG---GPAKAAFVCGTVPGHMGANA-------PPRDLAVTVKRTKKETALSRHKKWLQDLQSTKNQLEQSYLDEIKRKEEAKKRFMERESKMRAVIRASRD--------GDSTV----------LSAT----------MSASMA--VPAENKAERSDAKEEVPEDDEEEIAVA----VELAAAEKLREKQGRANRPAWALTEDKAKEAAEKQEEDDTAELLEFAQNLDFDKYIDDMEVQAMIDQVKTRINELEIMKDED------------------LEAEEVKGEARPHTLTEESVRRLQEK-------YGVAAEEKPADDDAISVAKSLLSN--TDLNKVHSTKSVAAVA 323          
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A7S2GJB4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GJB4_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.980e-37
Identity = 135/437 (30.89%), Postives = 188/437 (43.02%), Query Frame = 1
Query:  118 YKGVMLCNRPFTGTAMAAKGGAVVAAAAKNVFLTGVVKSELGYSGRALQTD-NQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNAN-AEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGDDNSDNASAIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDNMSVARTALSEGGWSLRSIHSTRSLAAVA-EKARGSISAARAEGVREAPSRLEEGPNCNGVEPADVAVNDIVVVTHKDDGGLRLGGKNNISNLPYIRRNPAV 1419
            YKGVMLCNRPF G A AA  G  V    K  F+ G V  ++G +      + N   KR KKETALTRHK+WL DLQ TK ELEE Y+ + + KEE+KKRF E EA+ R                                                                                      A +   + G   +P WAMTE NA  A D+ + E E+D LL F +GLDF+KYI D E+ +MI Q+K RI E+E                   ++ +++   E+R + +   L+ +++  ++ +  +       D      DD +SVAR+ L +    ++ +HS +S+ A+A  K  G I+ A+ E  REAP                       +VTH DD G RL  K  + NLPY+ RNP V
Sbjct:    1 YKGVMLCNRPFAGAAAAANTG--VGGVTKTAFVCGNVPDKIGTNVPVGTREVNTAVKRTKKETALTRHKKWLRDLQRTKDELEETYVNEMKSKEESKKRFMESEAKKR--------------------------------------------------------------------------------------ANRNESKTGEATKPMWAMTEENAKEASDQKEEEDEMD-LLNFAKGLDFDKYIDDMEVSTMIEQVKNRIGELE------------------TMNEEEVAAQEIRGENRPQTLSEQSIAKLQAKYGDVPRAEEKD------DDAVSVARSVLGDDA-KMKGVHSQKSVTAIAARKGLGKITEAKEEEKREAPR----------------------IVTHTDDDGTRLANKKEVHNLPYMNRNPCV 301          
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A7S3HD88_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HD88_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.830e-35
Identity = 139/450 (30.89%), Postives = 221/450 (49.11%), Query Frame = 1
Query:   76 GPGVALAAT-GSIGNYKGVMLCNRPFTGT-AMAAKGGAVVAAAAKNVFLTGVVKSELGYSGRALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGDDNSDNASAIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDNMSVARTALSEGGWSLRSIHSTRSLAAVAEKARGSISAARAEGVREAPSRLEEGPNCNGVEPADVAVNDIVVVTHKDDGGLRLGGKNNISNLPYIRRNPAV 1419
            GP +++    GSIGNYKGVMLCNRPF GT A  A GG+      K  F  GVV    G +   + +  +  K   K + L +HK+WL+DLQ TK  LE +Y+ + ++KEE++++F + E ++R AAR       +  D +       E HG   +D G   D ++ A+AK                           +TS +DSA   A  K +++   P    WAMTE+ A+ + E     E D LL F +GLDF+KY+ D E+Q+++ +++KRI ++E+   +++    D    A+           +R   + M +T  +LR+ ++R+             Q  +     A  AL +    ++++HST+S+AA+ + A+  I+  +A             P   GV      +N+ ++VTH    G RL  KN +S LPY+ RNPAV
Sbjct:   15 GPSISMVENMGSIGNYKGVMLCNRPFGGTVANKAPGGS---GGEKTTFNCGVVSEPAGLNV-PIGSKQKVLKYTNKNSVLAKHKKWLSDLQKTKDRLEVEYLEEAKRKEESQQKFQDHEKKMRLAARTALRTGDDEKDAKDAKGSGPESHG--GYDFG---DGEDKAQAK---------------------------YTS-SDSATAAAGSKHQQQQAKPA---WAMTEKAADNQFEDLLMNEEDDLLDFAKGLDFDKYMGDIEVQTVMERLRKRIADLERDVALEDSRNSDAETRAA-----------MRAKLEQMGITEASLRNEDQRD-------------QSEESAALTAARALLDSEEDMQAVHSTKSVAALLKSAKDKIAQVKA----------SVHP---GVAAEPKILNEPIIVTHDPSEGSRLEVKNALSKLPYMNRNPAV 387          
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: F0YGQ4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGQ4_AURAN)

HSP 1 Score: 128 bits (321), Expect = 8.110e-30
Identity = 101/275 (36.73%), Postives = 139/275 (50.55%), Query Frame = 1
Query:  106 SIGNYKGVMLCNRPFTGTAMAAKGGAVVAAAAKNVFLTGVVKSELGYS------GRALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVR-NEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIE 909
            SIGNYKGVMLCNRPF G    +KG   VAA+AK  F+ G V  + G +       +A  TD  PRK    ETAL RH++WLA+LQ TK +LE+ Y+ D + KE+  KRF EREAR+R   R+ +       D+ +D   +  +EHG +            + KA   D  R                   E + +  D           K    P RP WA+TE+ A +  +   + E D LL F  GLDF+KYI D+E+ ++I  ++ RI E+E
Sbjct:    8 SIGNYKGVMLCNRPFVGMVGTSKG---VAASAKQAFVCGNVGDKPGTNVPISSKEKAATTDQHPRK----ETALQRHRKWLAELQATKEQLEKHYLADVQMKEDRHKRFMEREARMRAMVRKAK-------DSVLDFESQAKDEHGEET----------SVEKASFEDSTR-------------------ETYPTVADG----------KSPAPPSRPMWALTEQQALSSVDCAEKNEADDLLDFANGLDFDKYISDSEVSALIENVRSRITELE 229          
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A1V9ZJS8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZJS8_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.930e-28
Identity = 128/438 (29.22%), Postives = 193/438 (44.06%), Query Frame = 1
Query:  106 SIGNYKGVMLCNRPFTGTAMAAKGGAVVAAAAKNVFLTGVVKSELGYSGRALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGDDNSDNASAIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDNMSVARTALSEGGWSLRSIHSTRSLAAVAEKARGSISAARAEGVREAPSRLEEGPNCNGVEPADVAVNDIVVVTHKDDGGLRLGGKNNISNLPYIRRNPAV 1419
            +IGNYKGVMLCNRPF   +  +K    V +A K  FL G+  S +G +           KR KK TAL++HK+WL DLQ  +  LEE  M DE  KEE K+RF++REA +R   R+   ++                          DDD     KA  G                                                 RP WA+T+  A+ + + + ++++D LL F   LD + ++ D E+++ +  + +++ +++K   V++   D+       +  ++  E +V N A + +L  K                G DSD    DD  SVA T LSE   S+RS+HS+RS+ A+  +A   ++           + LE  P  N             VVTH ++GG+RL  K+  SNLPY+ RNPAV
Sbjct: 1163 NIGNYKGVMLCNRPFNSVSTVSK---EVDSAKKAPFLGGIQPSHVGQNVPIFNESPHAVKRDKKNTALSKHKKWLYDLQKERERLEEVLMEDEASKEERKERFSKREAEMRNKVRQRMPQD--------------------------DDD-----KAIRG-------------------------------------------------RPAWALTKDKADCKRDQEEDEDVDHLLEFANNLDIDAFMDDVELKAQVAHVDEQMAQLQKL--VNQEEADEKKQEVKELLQNESLERQVLNAANLSRLDTK----------------GNDSDD---DDAKSVASTVLSECK-SIRSVHSSRSVLALTRRAEQKLT-----------THLESIPEPN-------------VVTHDEEGGMRLQNKHLTSNLPYMHRNPAV 1471          
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A024UN36_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UN36_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.480e-26
Identity = 122/443 (27.54%), Postives = 192/443 (43.34%), Query Frame = 1
Query:  106 SIGNYKGVMLCNRPFTGTAMAAKGGAVVAA----AAKNV-FLTGVVKSELGYSGRALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPDVDERYGDDNSDNASAIDGDKLDETEVRNDAKIMKLTVKNLRDIEKRNSNASVGTGVDSDVQPADDNMSVARTALSEGGWSLRSIHSTRSLAAVAEKARGSISAARAEGVREAPSRLEEGPNCNGVEPADVAVNDIVVVTHKDDGGLRLGGKNNISNLPYIRRNPAV 1419
            +IGNYKGVMLCNRPF G      G          ++K+  FLTG+    +G +           KR KK TAL++HK+WL DLQ  +  LEE  MVDE +K++ + RF++REA  R   R    EE                                                                     D+A+++ ++          RP WA+T+  A+ +   D E+++D+LL F   LD + ++ D E+++ + Q+ +++ ++++   V++  G++       +   +  E ++ N A + +L                     D+     DD +SVA T LSE   S+RS+HSTRS+ A+A +A   +   R   V E  S     P+               VVTH ++ G+RL  K+  SNLPYI RNPA+
Sbjct:  134 NIGNYKGVMLCNRPFNGVV---SGPPTTLKDTDHSSKHAPFLTGIQPPPIGQNVPIFNEPLHAIKRDKKNTALSKHKKWLHDLQKERDRLEEALMVDEEEKQKRRDRFSKREAEFRAQVRRTNPEE---------------------------------------------------------------------DAADVKGSK----------RPMWALTKETADEKRVRDEEEDVDRLLDFANNLDLDSFMDDVELKAHVAQVNEQLAKLQEV--VNQEEGEERKAEVKEMLQAERAERQMLNAAALSRLDT------------------ADAKGYVDDDAVSVASTVLSECK-SIRSVHSTRSVMALARRAEDKLLNGRLTTVPEGASGAVPSPH---------------VVTHDEECGMRLQNKHLPSNLPYIHRNPAI 458          
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Match: A0A8J2WVF2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WVF2_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.010e-23
Identity = 98/276 (35.51%), Postives = 128/276 (46.38%), Query Frame = 1
Query:  106 SIGNYKGVMLCNRPFTGTAMAAKGGAVVAAAAKNVFLTGVVKSELG----YSGRALQTDNQPRKRVKKETALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAREFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIPRLRSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAMTERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRIIEIEKQPD 921
            SIGNYKGVMLCNRPF G    +K G    A AK  F+ G V ++LG     S   +   NQ   R +KETAL RH++WLA+LQ TK +LE QY+ D +KKE   K+F +REA++R   R+         D R  G                  D+D   K     +                + V  E+  S    A   AA       G+  RP WA+TE  A          E D LL F   LDF+KYI D EI +++  ++ RI E+E   D
Sbjct:    8 SIGNYKGVMLCNRPFVGAVSQSKKGG---APAKQAFVCGKVDNKLGATIPISKGKIAKINQ---RSRKETALQRHRKWLAELQATKDQLEMQYLKDIQKKETKHKKFMDREAKMREVVRKVR-------DDRTYGCA----------------DLDSQEKYDKNQV---------------NDNVVMEVELS--PEASSGAA-------GDSSRPMWALTEDQAKEFAGGIETAEADDLLSFANSLDFDKYINDTEISALVQNVRSRICELEAYQD 230          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18547.5016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTT2_9PHAE1.160e-14255.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C827_9STRA1.990e-6639.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2WRE5_9STRA1.880e-5236.31Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2FR48_9STRA4.410e-4036.70Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2GJB4_9STRA1.980e-3730.89Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3HD88_9STRA1.830e-3530.89Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
F0YGQ4_AURAN8.110e-3036.73Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A1V9ZJS8_9STRA2.930e-2829.22Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A024UN36_9STRA1.480e-2627.54Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A8J2WVF2_9STRA2.010e-2335.51Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18547contigH-elongata_contig18547:1135..2998 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score436.8
Seed ortholog evalue1.3e-119
Seed eggNOG ortholog2880.D8LJZ8
EggNOG OGs2C7NW@1,2QUHB@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_007610.1
Exons3
Model size1422
Cds size1422
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18547.5016.1prot_H-elongata_contig18547.5016.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig18547 1135..2998 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930060.6353908-CDS-H-elongata_contig18547:1134..19381622930060.6353908-CDS-H-elongata_contig18547:1134..1938Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18547 1135..1938 +
1691679265.58838-CDS-H-elongata_contig18547:1134..19381691679265.58838-CDS-H-elongata_contig18547:1134..1938Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18547 1135..1938 +
1622930060.648853-CDS-H-elongata_contig18547:2163..23671622930060.648853-CDS-H-elongata_contig18547:2163..2367Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18547 2164..2367 +
1691679265.6032035-CDS-H-elongata_contig18547:2163..23671691679265.6032035-CDS-H-elongata_contig18547:2163..2367Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18547 2164..2367 +
1622930060.6661558-CDS-H-elongata_contig18547:2584..29981622930060.6661558-CDS-H-elongata_contig18547:2584..2998Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18547 2585..2998 +
1691679265.6113012-CDS-H-elongata_contig18547:2584..29981691679265.6113012-CDS-H-elongata_contig18547:2584..2998Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18547 2585..2998 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig18547.5016.1

>prot_H-elongata_contig18547.5016.1 ID=prot_H-elongata_contig18547.5016.1|Name=mRNA_H-elongata_contig18547.5016.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=474bp
MVLPTQGMMLSERPSEKAGDSTATAGPGVALAATGSIGNYKGVMLCNRPF
TGTAMAAKGGAVVAAAAKNVFLTGVVKSELGYSGRALQTDNQPRKRVKKE
TALTRHKRWLADLQLTKHELEEQYMVDERKKEETKKRFAEREARIRRAAR
EFEVEEGNGGDTRVDGNVRNEEHGIQAWDIGLDDDVDELAKAKAGDIPRL
RSNEGRNCHNEKGEKVHSELFTSRTDSAELRAAEKRRKRDGNPCRPKWAM
TERNANAEDELDHEQELDKLLGFTRGLDFEKYIRDAEIQSMINQIKKRII
EIEKQPDVDERYGDDNSDNASAIDGDKLDETEVRNDAKIMKLTVKNLRDI
EKRNSNASVGTGVDSDVQPADDNMSVARTALSEGGWSLRSIHSTRSLAAV
AEKARGSISAARAEGVREAPSRLEEGPNCNGVEPADVAVNDIVVVTHKDD
GGLRLGGKNNISNLPYIRRNPAV*
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mRNA from alignment at H-elongata_contig18547:1135..2998+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig18547.5016.1 ID=mRNA_H-elongata_contig18547.5016.1|Name=mRNA_H-elongata_contig18547.5016.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1864bp|location=Sequence derived from alignment at H-elongata_contig18547:1135..2998+ (Himanthalia elongata Himel1 dioecious)
ATGGTGCTTCCCACGCAAGGTATGATGCTCAGTGAACGCCCTTCGGAGAA GGCGGGCGACTCGACAGCGACCGCTGGGCCAGGTGTAGCCCTGGCAGCAA CGGGCAGCATCGGCAACTACAAAGGCGTCATGCTCTGTAACCGACCTTTC ACGGGAACAGCGATGGCGGCTAAAGGAGGAGCAGTGGTCGCTGCCGCCGC GAAAAACGTCTTCCTCACGGGAGTGGTTAAGTCAGAATTGGGTTATAGCG GGAGGGCCCTTCAGACGGACAATCAGCCCCGTAAGCGTGTGAAAAAAGAG ACGGCGCTTACACGACACAAGAGGTGGTTGGCCGACCTTCAATTGACTAA ACATGAGCTAGAGGAGCAATACATGGTGGACGAGCGGAAGAAGGAGGAAA CAAAGAAACGTTTTGCGGAGAGGGAGGCCCGCATACGGAGAGCGGCTCGC GAATTCGAAGTCGAGGAAGGTAATGGAGGTGATACTCGGGTCGACGGCAA CGTCAGAAACGAGGAACATGGGATTCAAGCGTGGGACATTGGGCTTGACG ACGACGTGGACGAGCTAGCTAAAGCGAAGGCTGGTGATATTCCCCGGCTT AGGTCGAACGAGGGCAGAAATTGTCATAATGAGAAGGGGGAGAAGGTACA CTCAGAACTATTTACGAGCAGAACTGATTCGGCAGAGCTGCGCGCGGCAG AAAAGCGGCGAAAAAGGGATGGCAATCCCTGTCGGCCTAAATGGGCGATG ACGGAGAGGAATGCCAACGCAGAGGATGAACTGGATCACGAGCAGGAGTT AGATGTGGGTAAAGGCGAAGCGTAGGCAAGTCTGTCATTATCTGAATATT CTAGATTTTAGTGTAGAATCGAACATCCAGGTGTTTCTTCAAATTGGCGT TGATTGTTTGGTTCAGAAGAATTGCCGAGTCCGTCCCACGACATGCGATG TGGAGAGAACTTGTTCGCAATTCTTCAAAACTACATAATTGTTACAAAAA AATGGATGCCCGCATACGCCTTTCACCAGAAATTGCTCGGGTTTACACGG GGGCTGGATTTCGAAAAGTATATCCGAGACGCCGAAATCCAGTCGATGAT CAACCAGATCAAGAAGCGAATTATCGAAATCGAGAAACAGCCGGATGTAG ATGAACGGTATGGAGACGATAACAGTGACAACGCTAGCGCCATAGATGGG GATAAACTCGACGAGACTGAGGTGAGAAATGATGTATGAATGGCACCCAT AAGGTTTTGCTCTATCGTGATGCAGTATTGGATCATTTGCGTGGGACTGT GTTGCCATACCCTCCTCGAGTAGGAAAGCATGACTCTCGTGTAAATTTAC AATTAAATTCAGAGCTGCACCTGTAGCGTCCTTGAAACGACTTGCCGATA TGATGTGTTAAGCACGCGCTGCCATCTTCGCCTCGTTTCATTTTTCGAAG GCGAAGATCATGAAGCTCACGGTCAAGAATCTCCGTGACATCGAAAAGCG CAATAGTAACGCCAGCGTCGGTACAGGCGTAGATAGCGATGTCCAGCCGG CGGACGACAATATGAGCGTTGCCCGAACGGCGCTCTCCGAGGGTGGGTGG AGCTTACGCTCTATCCACTCGACGCGATCCCTTGCCGCCGTGGCAGAGAA GGCACGAGGGAGTATCTCGGCAGCGCGTGCCGAGGGCGTCCGTGAAGCCC CGTCAAGGCTCGAGGAGGGGCCAAATTGCAACGGTGTGGAACCCGCTGAC GTGGCAGTGAACGACATCGTTGTGGTTACTCACAAGGACGACGGGGGGCT GCGACTCGGCGGCAAGAATAATATCAGCAATTTGCCCTATATAAGGAGGA ACCCTGCCGTGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig18547:1135..2998+

>mRNA_H-elongata_contig18547.5016.1 ID=mRNA_H-elongata_contig18547.5016.1|Name=mRNA_H-elongata_contig18547.5016.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2844bp|location=Sequence derived from alignment at H-elongata_contig18547:1135..2998+ (Himanthalia elongata Himel1 dioecious)
ATGGTGCTTCCCACGCAAGGTATGATGCTCAGTGAACGCCCTTCGGAGAA
GGCGGGCGACTCGACAGCGACCGCTGGGCCAGGTGTAGCCCTGGCAGCAA
CGGGCAGCATCGGCAACTACAAAGGCGTCATGCTCTGTAACCGACCTTTC
ACGGGAACAGCGATGGCGGCTAAAGGAGGAGCAGTGGTCGCTGCCGCCGC
GAAAAACGTCTTCCTCACGGGAGTGGTTAAGTCAGAATTGGGTTATAGCG
GGAGGGCCCTTCAGACGGACAATCAGCCCCGTAAGCGTGTGAAAAAAGAG
ACGGCGCTTACACGACACAAGAGGTGGTTGGCCGACCTTCAATTGACTAA
ACATGAGCTAGAGGAGCAATACATGGTGGACGAGCGGAAGAAGGAGGAAA
CAAAGAAACGTTTTGCGGAGAGGGAGGCCCGCATACGGAGAGCGGCTCGC
GAATTCGAAGTCGAGGAAGGTAATGGAGGTGATACTCGGGTCGACGGCAA
CGTCAGAAACGAGGAACATGGGATTCAAGCGTGGGACATTGGGCTTGACG
ACGACGTGGACGAGCTAGCTAAAGCGAAGGCTGGTGATATTCCCCGGCTT
AGGTCGAACGAGGGCAGAAATTGTCATAATGAGAAGGGGGAGAAGGTACA
CTCAGAACTATTTACGAGCAGAACTGATTCGGCAGAGCTGCGCGCGGCAG
AAAAGCGGCGAAAAAGGGATGGCAATCCCTGTCGGCCTAAATGGGCGATG
ACGGAGAGGAATGCCAACGCAGAGGATGAACTGGATCACGAGCAGGAGTT
AGATATGGTGCTTCCCACGCAAGGTATGATGCTCAGTGAACGCCCTTCGG
AGAAGGCGGGCGACTCGACAGCGACCGCTGGGCCAGGTGTAGCCCTGGCA
GCAACGGGCAGCATCGGCAACTACAAAGGCGTCATGCTCTGTAACCGACC
TTTCACGGGAACAGCGATGGCGGCTAAAGGAGGAGCAGTGGTCGCTGCCG
CCGCGAAAAACGTCTTCCTCACGGGAGTGGTTAAGTCAGAATTGGGTTAT
AGCGGGAGGGCCCTTCAGACGGACAATCAGCCCCGTAAGCGTGTGAAAAA
AGAGACGGCGCTTACACGACACAAGAGGTGGTTGGCCGACCTTCAATTGA
CTAAACATGAGCTAGAGGAGCAATACATGGTGGACGAGCGGAAGAAGGAG
GAAACAAAGAAACGTTTTGCGGAGAGGGAGGCCCGCATACGGAGAGCGGC
TCGCGAATTCGAAGTCGAGGAAGGTAATGGAGGTGATACTCGGGTCGACG
GCAACGTCAGAAACGAGGAACATGGGATTCAAGCGTGGGACATTGGGCTT
GACGACGACGTGGACGAGCTAGCTAAAGCGAAGGCTGGTGATATTCCCCG
GCTTAGGTCGAACGAGGGCAGAAATTGTCATAATGAGAAGGGGGAGAAGG
TACACTCAGAACTATTTACGAGCAGAACTGATTCGGCAGAGCTGCGCGCG
GCAGAAAAGCGGCGAAAAAGGGATGGCAATCCCTGTCGGCCTAAATGGGC
GATGACGGAGAGGAATGCCAACGCAGAGGATGAACTGGATCACGAGCAGG
AGTTAGATAAATTGCTCGGGTTTACACGGGGGCTGGATTTCGAAAAGTAT
ATCCGAGACGCCGAAATCCAGTCGATGATCAACCAGATCAAGAAGCGAAT
TATCGAAATCGAGAAACAGCCGGATGTAGATGAACGGTATGGAGACGATA
ACAGTGACAACGCTAGCGCCATAGATGGGGATAAACTCGACGAGACTGAG
GTGAGAAATGATAAATTGCTCGGGTTTACACGGGGGCTGGATTTCGAAAA
GTATATCCGAGACGCCGAAATCCAGTCGATGATCAACCAGATCAAGAAGC
GAATTATCGAAATCGAGAAACAGCCGGATGTAGATGAACGGTATGGAGAC
GATAACAGTGACAACGCTAGCGCCATAGATGGGGATAAACTCGACGAGAC
TGAGGTGAGAAATGATGCGAAGATCATGAAGCTCACGGTCAAGAATCTCC
GTGACATCGAAAAGCGCAATAGTAACGCCAGCGTCGGTACAGGCGTAGAT
AGCGATGTCCAGCCGGCGGACGACAATATGAGCGTTGCCCGAACGGCGCT
CTCCGAGGGTGGGTGGAGCTTACGCTCTATCCACTCGACGCGATCCCTTG
CCGCCGTGGCAGAGAAGGCACGAGGGAGTATCTCGGCAGCGCGTGCCGAG
GGCGTCCGTGAAGCCCCGTCAAGGCTCGAGGAGGGGCCAAATTGCAACGG
TGTGGAACCCGCTGACGTGGCAGTGAACGACATCGTTGTGGTTACTCACA
AGGACGACGGGGGGCTGCGACTCGGCGGCAAGAATAATATCAGCAATTTG
CCCTATATAAGGAGGAACCCTGCCGTGTAGGCGAAGATCATGAAGCTCAC
GGTCAAGAATCTCCGTGACATCGAAAAGCGCAATAGTAACGCCAGCGTCG
GTACAGGCGTAGATAGCGATGTCCAGCCGGCGGACGACAATATGAGCGTT
GCCCGAACGGCGCTCTCCGAGGGTGGGTGGAGCTTACGCTCTATCCACTC
GACGCGATCCCTTGCCGCCGTGGCAGAGAAGGCACGAGGGAGTATCTCGG
CAGCGCGTGCCGAGGGCGTCCGTGAAGCCCCGTCAAGGCTCGAGGAGGGG
CCAAATTGCAACGGTGTGGAACCCGCTGACGTGGCAGTGAACGACATCGT
TGTGGTTACTCACAAGGACGACGGGGGGCTGCGACTCGGCGGCAAGAATA
ATATCAGCAATTTGCCCTATATAAGGAGGAACCCTGCCGTGTAG
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