prot_H-elongata_contig9950.17281.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9950.17281.1
Unique Nameprot_H-elongata_contig9950.17281.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length840
Homology
BLAST of mRNA_H-elongata_contig9950.17281.1 vs. uniprot
Match: D7FYV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV6_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 5.250e-53
Identity = 235/742 (31.67%), Postives = 331/742 (44.61%), Query Frame = 0
Query:   62 KAKYAHRLREKMNANETMRRA-------SASVINETSG------------GED--VVGRATNAXXXXXXXXXXXXASKKR-DKYSQGQIVISPSANDGPVWLEDATEGREKRRRSLNAEYAEQLRAQIAERAGVQRACVSKSRALEEGMEDVSRNPDIAMDSDVREESREGPQTQFSHDKLL----AFDSTSG------TVVPSHAMP--------VSLVRNAAH---ISAWQKRVDHQREYAEALRRDMAVPKIDSLGRPIEDINSPSKDRRQH----VQNIPNLSYFVGQRHHQSGKPPQHYYRPWSNN--GSHASEWGPQQKMTFSKDETLRD--LPIDVWQIQNHQHRG------WRGGERPPLP-----TESGSPRGPYDRADASEHNVIDRVGHTGGLDRSIEVEKYLTGRDGHPP---LAKPKQRRGGKYPIKYWKESSGSIDQGSRER-SWLAKNNWGATLQETHAGSEHARGIYLCDYLGSKETLTPRTHGQ----AYSQRNGRGAVLSNRMSTRASNMHNPIDPYELARMKAKKDAYRRDLEAQIAEHNNCTEKHSKDRPGLIDAEVIRFEETNEDKVNTPGANPGFEIGAVGKEI---NNSSTHGGHMF-------------------------TENAVGPVTPKSSSWLIA-----TEGGVLVNGSLPREV-DGCGVVGPIR-GSRVRGLLGLENDEGKKERERERGRLQAKSLKKQVEDNKVRREKEQA 698
            KA+YA +LRE+M ++E  R+A         S ++  +G            GED  V      A            A+K+   + ++G++  S SAN GP W+E ATEGR+ RRR  N EYAEQLRAQIA +  + +A  S   A             +    D+ E+       Q  H +LL    +FD  SG      + +  H           +SL R        +A Q+RV+HQREYAEALRRDMA PK+DSLGRPI DI SPS+ R ++     +N  N   F GQ +  S      + +P      G H  +W  Q    F + E LR+   P   W     Q +G       R   +PP+P         +P+G   R D  E         TG    +  V   ++     PP        +RRG ++         G    G+R R       +W  T      G  H R ++       +E    R  G       +   G G  +    ST+AS MHNP+DP ELAR++AKK++YRRDLEAQ+AEH    ++  +  PG  +AEV   ++  E++       PG+EIG +G  +   N S+T  G                            +   VG  TP++SS L       T   +L       +V D  GV  P R GS +R LLG+E +    ER+RE+ R+QA++LKKQVEDNKVRR+ ++A
Sbjct:   73 KAEYASQLREQMASDEATRKAMEIERKCKVSTVSSAAGPAIGEHEEGLRGGEDEWVNESVRQAKAEYAQQLREQMAAKENAQRAAKGEMENSRSANAGPSWIEGATEGRKARRRRSNTEYAEQLRAQIAAQKSINQAQQSLVAAR------------VQPPKDMFEQGGYEKYYQQLHQRLLGGVSSFDYQSGEPERRRSQIDDHRSQGRPRTEEKISLSRGEVSNPLATARQERVNHQREYAEALRRDMAAPKVDSLGRPIGDITSPSRTRLRNSNSGTRNTNNNPEFFGQNYGNSAPREAGHLQPGPRPQAGEHVRDWSQQP---FER-EYLREHATPYGAWPSSQAQSQGPYEVGEHRHSRQPPVPGTHYEAYGSNPKGYPSRGDYDELEYP-----TGRRGNAKWVADGISASGLPPPRRDFVDDGERRGERWGTSGPYPERGGGYPGNRTRLPEFGGKSWDIT--NPSVGGGHDRNVHPGPIRDHREQQDRRYFGPRGPPGGAPAAGGGVGVR---STKASTMHNPVDPEELARIQAKKESYRRDLEAQMAEHTKLQDQRKQGVPGSKEAEVFHLQKAMEERSERNKMAPGYEIGPLGVPVIKDNYSTTGRGQRSPAKMRAVAPAATGNQGLSASSAIDPSSGPVGESTPQTSSELFGSGHDGTSSSLLAPSGGGADVSDAEGVGAPSRRGSGLRELLGIETNA---ERDREKSRVQAEALKKQVEDNKVRRDIQKA 785          
BLAST of mRNA_H-elongata_contig9950.17281.1 vs. uniprot
Match: A0A6H5KLL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL2_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 9.810e-50
Identity = 232/744 (31.18%), Postives = 321/744 (43.15%), Query Frame = 0
Query:   62 KAKYAHRLREKM-------NANETMRRASASVINETSG--------------GEDVVGRATNAXXXXXXXXXXXXASKKR-DKYSQGQIVISPSANDGPVWLEDATEGREKRRRSLNAEYAEQLRAQIAERAGVQRACVSKSRALEEGMEDVSRNPDIAMDSDVREESREGPQTQFSHDKLL----AFDSTSGTVV--------------PSHAMPVSLVR---NAAHISAWQKRVDHQREYAEALRRDMAVPKIDSLGRPIEDINSPSKDRRQH----VQNIPNLSYFVGQRHHQSGKPPQHYYRPWSNNGSHASEWGPQQKMTFSKDETLRD--LPIDVW-----------QIQNHQHRGWRGGERPPLPTESGSPRGPYDRADASEHNVIDRVGHTGGLDRSIEVEKYLTGRDGH--------------PP---LAKPKQRRGGKYPIK--YWKESSGSIDQGSRERSWLAKNNWGATLQETHAGSEHA--RGIYLCDYLGSKET-----LTPRTHGQAYSQRNGRGAVLSNRMSTRASNMHNPIDPYELARMKAKKDAYRRDLEAQIAEHNNCTEKHSKDRPGLIDAEVIRFEETNEDKVNTPGANPGFEIGAVGKEI---NNSSTHGGHM-------------------------FTENAVGPVTPKSSSWLIATEGGVLVNGSLPREVDGCGVVGPIR-GSRVRGLLGLENDEGKKERERERGRLQAKSLKKQVEDNK 690
            KA+YA +LRE+M        A ET R+++ S+++  +G               E V      A            A+K+   + ++G++  S SAN GP W+E ATEGRE  RR  N EYAEQLRAQIA +  + +A  S   A             +    D+ E+       Q  H +LL    +FD  SG                 P     +SL R   N    +A Q+RV+HQREYAEALRRDMA PK+DSLGRPI DI SPS+ R ++     +N  N   F GQ      +       P    G HA  W  Q    F + E LR+   P   W           ++  HQH       +PP+P  +      YD   ++      R    GG D   E+E Y TGR G+              PP    A   +RRG ++     Y    SG     S    +  KN    + + TH    H   R ++L      +E        PR          G   V S    T+AS MHNP+DP ELA+++AKK++YRRDLEAQ+AE      +  +      +AEV   ++  E++       PG+EIG +G  +   N S+T  G                            +   VG   P+++S L  +      +  LP    G GV  P R GS +R LLG+E    + ER+RE+ R+QA++LKKQVEDNK
Sbjct:   73 KAEYASQLREQMASDEATKKAMETERKSNVSIVSFAAGPAIGGHEEGLRGGENERVNESVRQAKAEYAHQLREQMAAKENAQRAAKGEMENSRSANAGPSWIEGATEGREACRRRSNTEYAEQLRAQIAAQKSINQAQQSLVAAR------------VQPPKDIIEQGGNEKHYQQEHQQLLGGVNSFDYQSGEPERHRSQIDDRRSQGRPRTEEKISLSRGEFNNPLATARQERVNHQREYAEALRRDMAAPKVDSLGRPIGDITSPSRTRLRNSNSGTRNTNNNPEFFGQNDGAPREASHLQLGPRPQAGEHARGWSQQP---FER-ECLREHATPYGAWPSFRAQSQGRYEVGEHQH-----SRQPPVPGTN------YDAYGSNPKGYPSR----GGYD---ELE-YPTGRRGNATWVAEGISTSGLPPPRREFADDGERRGERWGTSESYPATGSGYPIHRSILPEFGGKNARQESWETTHPSVRHGYNRDVHLVPIRDHREQQDHWYFGPRDPPSGAPAVGGGVGVRS----TKASKMHNPVDPVELAKIQAKKESYRRDLEAQMAERTKLQNQRKQGMHRSKEAEVFYLQQAMEERNERNKMAPGYEIGPLGVPVIKDNYSTTGRGQRSPAKMRAVAPAATVNRGLAASSAIGLSSTPVGESVPQTNSDLFGSGHDGTSSSLLPPSEGGAGVGAPSRRGSGLRELLGIET---RAERDREKSRVQAEALKKQVEDNK 774          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9950.17281.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYV6_ECTSI5.250e-5331.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLL2_9PHAE9.810e-5031.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 528..548
NoneNo IPR availableCOILSCoilCoilcoord: 757..777
NoneNo IPR availableCOILSCoilCoilcoord: 683..703

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9950contigH-elongata_contig9950:649..6859 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9950.17281.1mRNA_H-elongata_contig9950.17281.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9950 312..6940 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9950.17281.1 ID=prot_H-elongata_contig9950.17281.1|Name=mRNA_H-elongata_contig9950.17281.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=840bp
MAADVTAAQCTRKNAHWPVTGHTGGNILMPSQDNALKRQIGGEGGVPVAE
RGDSEGEILGNKAKYAHRLREKMNANETMRRASASVINETSGGEDVVGRA
TNAKAEYARQLREKIASKKRDKYSQGQIVISPSANDGPVWLEDATEGREK
RRRSLNAEYAEQLRAQIAERAGVQRACVSKSRALEEGMEDVSRNPDIAMD
SDVREESREGPQTQFSHDKLLAFDSTSGTVVPSHAMPVSLVRNAAHISAW
QKRVDHQREYAEALRRDMAVPKIDSLGRPIEDINSPSKDRRQHVQNIPNL
SYFVGQRHHQSGKPPQHYYRPWSNNGSHASEWGPQQKMTFSKDETLRDLP
IDVWQIQNHQHRGWRGGERPPLPTESGSPRGPYDRADASEHNVIDRVGHT
GGLDRSIEVEKYLTGRDGHPPLAKPKQRRGGKYPIKYWKESSGSIDQGSR
ERSWLAKNNWGATLQETHAGSEHARGIYLCDYLGSKETLTPRTHGQAYSQ
RNGRGAVLSNRMSTRASNMHNPIDPYELARMKAKKDAYRRDLEAQIAEHN
NCTEKHSKDRPGLIDAEVIRFEETNEDKVNTPGANPGFEIGAVGKEINNS
STHGGHMFTENAVGPVTPKSSSWLIATEGGVLVNGSLPREVDGCGVVGPI
RGSRVRGLLGLENDEGKKERERERGRLQAKSLKKQVEDNKVRREKEQAVL
EEQDREEEIRLGRERDQLQKRYDDEQGRTVKATESERLLREAEEARIATM
APRVAEAAILRRELEKQEDANVNTEQKGIGKKSIYKRMAEKSIGLGLSLV
LCESDPARRIEQAKPPQKVGVISPASPARANSPRKARTN*
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