prot_H-elongata_contig9939.17275.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9939.17275.1
Unique Nameprot_H-elongata_contig9939.17275.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length70
Homology
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BLAST of mRNA_H-elongata_contig9939.17275.1 vs. uniprot
Match: D7FLK1_ECTSI (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK1_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 7.230e-12
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0 
Query:    1 VYGSDLCLPAIEDARKNAITNDIDNCEFVCGKARTV 36
            VYGSD+CLPAIEDAR+NA+ N IDNCEFVCGKA  V
Sbjct:  511 VYGSDICLPAIEDARRNALANGIDNCEFVCGKAEAV 546
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9939.17275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLK1_ECTSI7.230e-1280.56Methyltransf_25 domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150coord: 1..63
e-value: 1.0E-8
score: 36.5
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 1..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9939contigH-elongata_contig9939:891..1355 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9939.17275.1mRNA_H-elongata_contig9939.17275.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9939 891..1355 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9939.17275.1 ID=prot_H-elongata_contig9939.17275.1|Name=mRNA_H-elongata_contig9939.17275.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=70bp
VYGSDLCLPAIEDARKNAITNDIDNCEFVCGKARTVYKNTGKLLKRQGRR
QAPVDRRQETYRRDQERCGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases