prot_H-elongata_contig99353.17272.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig99353.17272.1
Unique Nameprot_H-elongata_contig99353.17272.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length88
Homology
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BLAST of mRNA_H-elongata_contig99353.17272.1 vs. uniprot
Match: A0A6H5JGW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW6_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 6.640e-18
Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 0 
Query:    1 GWGGRGGLARVRVDTALRPQDPAVLFMPGATEATRDRVVDVRVHAIPPHYVLPWATVEMVLPG 63
            GW G GG ARVRVDTALRPQDPAV+ +PG   A RD VV +R  A+PPH+V PW TVE+V  G
Sbjct:  272 GWRGCGGPARVRVDTALRPQDPAVMIIPGPRAAARDPVVHLRACAVPPHFVQPWTTVEIVRDG 334
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99353.17272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGW6_9PHAE6.640e-1865.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig99353contigH-elongata_contig99353:662..925 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig99353.17272.1mRNA_H-elongata_contig99353.17272.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig99353 662..925 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig99353.17272.1 ID=prot_H-elongata_contig99353.17272.1|Name=mRNA_H-elongata_contig99353.17272.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp
GWGGRGGLARVRVDTALRPQDPAVLFMPGATEATRDRVVDVRVHAIPPHY
VLPWATVEMVLPGDDGCGRKVSVEAQWNKSGEYSKVE*
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