prot_H-elongata_contig99195.17258.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig99195.17258.1
Unique Nameprot_H-elongata_contig99195.17258.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length127
Homology
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BLAST of mRNA_H-elongata_contig99195.17258.1 vs. uniprot
Match: A0A6H5JTZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ5_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 1.240e-20
Identity = 60/145 (41.38%), Postives = 86/145 (59.31%), Query Frame = 0 
Query:    1 DSDNDLRTPN-NHSFYPLLFVSVLPKIGHIMDPSTGEIV----------------YRPRLNEYDTVNP--YTTFSYYAEDMETGKRSYDDATVTIYVNPKNDPPRAFNLTFDAIAGNRQNIFNLLHGSDRDESDEVQGAQIDKLP 126
            DSDND  TPN ++S  P +FV+ LP +G +++ S  +I                 YRP LN++ T +   Y  FS+YA D E+G RS+ +ATV++YV  KNDPP+A N +    AG+R+N F  L+G+D D  D+V GA I + P
Sbjct:  328 DSDNDPATPNYDNSTSPRVFVNTLPFLGSLVNSSGDDISSVPFEVLEDAGAFAVRYRPILNDFSTNDSVVYANFSFYATDGESGTRSHTNATVSMYVFSKNDPPQALNASHGVFAGSREN-FIPLNGTDMDAFDDVHGAAIVEPP 471
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99195.17258.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JTZ5_9PHAE1.240e-2041.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig99195contigH-elongata_contig99195:521..952 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig99195.17258.1mRNA_H-elongata_contig99195.17258.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig99195 521..952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig99195.17258.1 ID=prot_H-elongata_contig99195.17258.1|Name=mRNA_H-elongata_contig99195.17258.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp
DSDNDLRTPNNHSFYPLLFVSVLPKIGHIMDPSTGEIVYRPRLNEYDTVN
PYTTFSYYAEDMETGKRSYDDATVTIYVNPKNDPPRAFNLTFDAIAGNRQ
NIFNLLHGSDRDESDEVQGAQIDKLPP
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