prot_H-elongata_contig9916.17256.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9916.17256.1
Unique Nameprot_H-elongata_contig9916.17256.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length635
Homology
BLAST of mRNA_H-elongata_contig9916.17256.1 vs. uniprot
Match: D7FZA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA3_ECTSI)

HSP 1 Score: 784 bits (2024), Expect = 1.170e-273
Identity = 410/642 (63.86%), Postives = 487/642 (75.86%), Query Frame = 0
Query:    7 QADGITPNVRFLDHMMQASVGSKQWVTAEALFRAMTEKYGHAAVVSKQSTFHFVKSMVMQKKLRKVISYVARIQNIPMQGPAP----RGTLDVQVLKCFRNIPGVGSEALAGVLMTMADQGVKLHPDSYSVVISKANRDGNKQLSESLYKMLLAGKGPPSLSAANAAIKGCMDIDSALEIWSSLAEHSLAPDKFTYAAFFHCCSKASQGDDQRQQIQDKAAQVWEAMLADGIVPHGGMLASYLQTLMRAGDWKAALEVRNRHLGGEG---LSIAEKHVDKLDFVAREEAVVDGVMANGLVDNGQPQLALKYVQDVLEARSLVRSRSSPCPAERFHFVDEDNHTVLAGIRACHLAGSCEIAMGLLKTCEARWAQGPLAPDAHGGASGAEGQHDW---DWRDITIRTRESRRRVYDCLLSLLEDKGATGSDIRGVLEEGMRNGAVSLMKDQHGGNSAEQALDFHGWSPRSARCVLRCIVEDITRDADLLQSNGQYDLGRAVTAQGLREFGDASERWHADSPDPRGRRREFADGARPVRFEEREYGKGKKRGKKTRV------AVWGGEGCPE-QAFWWRVGVEVRLSIVVGKPRRPPSIRHSLEEFCTLGVRPPLRVRQDATNPGVLNIEPKDVRAWLQQGGTI 631
            + +GI PN RFLDHMMQASV +KQWVTAEA+FRAMTEKYGH+ VV++QST  F++SMVMQKKLRKVISYVARIQ++P++GP+     + T+D  +LK FR IPGV SEA+AGVLMTM D+GV+LHPDSYSVVISKAN+DGNK+LS +LYKMLLA    PSLSAANAAIKG   ID AL    +L E  L+PDKFT+AA  HCCS A+ GDD + Q   +A +VWEAM  +GI PHGGMLASYL +LMR+ DWK AL+VR R+ G E    LS AE+HV KLDFVAREEAVVDGV+ANGLVDN QP LAL YV +VL+AR    +      ++  HF+DEDNHTVLAGIRAC   GSCE AMGLL+ CEARWA+GPL  DA  G  G EGQ  W   +WR + +RTR SRRR+YDCL+S+L++K     DIR VLE GMRNGAVSLMKDQ GG SA+QA+DFHGWS RSA C++RCI+ED+T   D L   GQYDLGRA  AQGLREFG+ S+RWH DSPDPRGRRREFADG  P RF EREYGKG+KR  ++          W G G  E QA WW    + RLS+VVG+PR PP IR+++EEFC LGV PPLRV++ A+NPG+L IEP+DV+AWL +   I
Sbjct:  319 EGEGIPPNSRFLDHMMQASVAAKQWVTAEAIFRAMTEKYGHSNVVTRQSTMDFIQSMVMQKKLRKVISYVARIQDLPLKGPSRSKGRKNTMDTALLKWFRAIPGVSSEAMAGVLMTMLDKGVRLHPDSYSVVISKANQDGNKELSGTLYKMLLAANAAPSLSAANAAIKGSATIDEALATVETLREQGLSPDKFTFAALLHCCS-AAVGDDLQGQ---RATEVWEAMCGEGIRPHGGMLASYLLSLMRSADWKTALDVRERYRGDEEEFQLSHAERHVHKLDFVAREEAVVDGVVANGLVDNKQPDLALAYVLEVLKAREEEGASDIGSDSDLKHFIDEDNHTVLAGIRACKQVGSCETAMGLLEACEARWARGPLERDAGRGDGGEEGQ--WAQHEWRQMLVRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLERGMRNGAVSLMKDQQGGTSADQAVDFHGWSTRSAGCIVRCIIEDLTLGQDFLHRTGQYDLGRAALAQGLREFGNVSDRWHVDSPDPRGRRREFADGVTPARFAEREYGKGRKRNPESTPRWVKPEGGWDGCGSDESQARWWEK--QKRLSLVVGRPRPPPCIRNAVEEFCMLGVSPPLRVQKAASNPGILTIEPEDVQAWLGRNPRI 952          
BLAST of mRNA_H-elongata_contig9916.17256.1 vs. uniprot
Match: A0A6H5L791_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L791_9PHAE)

HSP 1 Score: 485 bits (1248), Expect = 2.230e-164
Identity = 250/405 (61.73%), Postives = 301/405 (74.32%), Query Frame = 0
Query:  240 MLASYLQTLMRAGDWKAALEVRNRHLGGEG---LSIAEKHVDKLDFVAREEAVVDGVMANGLVDNGQPQLALKYVQDVLEARSLVRSRSSPC--PAERFHFVDEDNHTVLAGIRACHLAGSCEIAMGLLKTCEARWAQGPLAPDAHGGASGAEGQH-DWDWRDITIRTRESRRRVYDCLLSLLEDKGATGSDIRGVLEEGMRNGAVSLMKDQHGGNSAEQALDFHGWSPRSARCVLRCIVEDITRDADLLQSNGQYDLGRAVTAQGLREFGDASERWHADSPDPRGRRREFADGARPVRFEEREYGKGKKRGKKTRV------AVWGGEGCPE-QAFWWRVGVEVRLSIVVGKPRRPPSIRHSLEEFCTLGVRPPLRVRQDATNPGVLNIEPKDVRAWLQQGGTI 631
            MLASYL  LMR+GDWK AL+VR R+ G +    LS AE+HV KLDFVAREEAVVDGV+ANGLVDN QP LAL YV +VL+AR   +  +S     ++  HF+DEDNHTVLAGIRAC  AGSCE A+GLL+ CEARWA+GPL  DA  G    EGQ   ++WR + +RTR SRRR+YDCL+S+L++K     DIR VLE GM+NGAVSLMKDQ GG SA+QA+DFHGWS RSARC++RCI+ED+T   D L   GQYDLGR   AQGLREFG+ S+RWH DSPDPRGRRREFADG  P RF EREYGKG+KR  + +         W G G  E QA WW    + RLS+VVGKPR PP IR+++EEFC LGV PPLRV++ A+NPG+L IEP+DV+AWL++   +
Sbjct:    1 MLASYLLALMRSGDWKTALDVRERYRGDKEEFQLSHAERHVHKLDFVAREEAVVDGVVANGLVDNKQPGLALAYVLEVLKAREEGKEGASGNGNDSDLKHFIDEDNHTVLAGIRACKQAGSCETAIGLLEACEARWAKGPLERDAGSGGGSEEGQWAQYEWRAMLVRTRLSRRRLYDCLISVLDEKDHDFGDIRRVLETGMKNGAVSLMKDQQGGTSADQAVDFHGWSTRSARCIVRCIIEDLTLGQDFLHRTGQYDLGRVALAQGLREFGNVSDRWHVDSPDPRGRRREFADGVTPARFAEREYGKGRKRNPEKKSHWVKPEGGWDGRGSDESQARWWEK--QKRLSLVVGKPRPPPCIRNAVEEFCMLGVSPPLRVQKAASNPGILTIEPEDVQAWLERNPRV 403          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9916.17256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZA3_ECTSI1.170e-27363.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L791_9PHAE2.230e-16461.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 109..278
e-value: 2.7E-16
score: 61.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9916contigH-elongata_contig9916:2603..9106 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9916.17256.1mRNA_H-elongata_contig9916.17256.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9916 2603..9106 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9916.17256.1 ID=prot_H-elongata_contig9916.17256.1|Name=mRNA_H-elongata_contig9916.17256.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=635bp
MGARGYQADGITPNVRFLDHMMQASVGSKQWVTAEALFRAMTEKYGHAAV
VSKQSTFHFVKSMVMQKKLRKVISYVARIQNIPMQGPAPRGTLDVQVLKC
FRNIPGVGSEALAGVLMTMADQGVKLHPDSYSVVISKANRDGNKQLSESL
YKMLLAGKGPPSLSAANAAIKGCMDIDSALEIWSSLAEHSLAPDKFTYAA
FFHCCSKASQGDDQRQQIQDKAAQVWEAMLADGIVPHGGMLASYLQTLMR
AGDWKAALEVRNRHLGGEGLSIAEKHVDKLDFVAREEAVVDGVMANGLVD
NGQPQLALKYVQDVLEARSLVRSRSSPCPAERFHFVDEDNHTVLAGIRAC
HLAGSCEIAMGLLKTCEARWAQGPLAPDAHGGASGAEGQHDWDWRDITIR
TRESRRRVYDCLLSLLEDKGATGSDIRGVLEEGMRNGAVSLMKDQHGGNS
AEQALDFHGWSPRSARCVLRCIVEDITRDADLLQSNGQYDLGRAVTAQGL
REFGDASERWHADSPDPRGRRREFADGARPVRFEEREYGKGKKRGKKTRV
AVWGGEGCPEQAFWWRVGVEVRLSIVVGKPRRPPSIRHSLEEFCTLGVRP
PLRVRQDATNPGVLNIEPKDVRAWLQQGGTITGP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf