prot_H-elongata_contig99051.17251.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig99051.17251.1
Unique Nameprot_H-elongata_contig99051.17251.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length85
Homology
BLAST of mRNA_H-elongata_contig99051.17251.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 2.020e-22
Identity = 46/83 (55.42%), Postives = 58/83 (69.88%), Query Frame = 0
Query:    3 ASAATLEAGILTAVTVYAPLYDPNTSDANGCDPAGCIADFTRDGDSTTPQSRWSCQPSLGGAGSTCAIIYNLEDPFPIQGLSV 85
            A AA +EA  L  VT  A LYDP  S  NGCDP+GC+A+ TRDGD+T+ +SRWSCQP+LG AGS C I Y L   + + GL++
Sbjct:   20 ADAAIVEASTLATVTAVADLYDPRLSADNGCDPSGCVAELTRDGDATSLESRWSCQPALGDAGSVCRITYGLGIQYQLTGLNI 102          
BLAST of mRNA_H-elongata_contig99051.17251.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 4.540e-21
Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 0
Query:    3 ASAATLEAGILTAVTVYAPLYDPNTSDANGCDPAGCIADFTRDGDSTTPQSRWSCQPSLGGAGSTCAIIYNLEDPFPIQGLSV 85
            A AA +EA  L  VT  A LYDP+ S  NGCDP+GC+A+ TRDGD T+ +SRWSCQP+LG AGS C I Y L   + +  +++
Sbjct:   21 ADAAIVEASTLATVTAVADLYDPSLSAENGCDPSGCVAELTRDGDVTSLESRWSCQPALGDAGSECRITYGLGIQYQLSAVNI 103          
BLAST of mRNA_H-elongata_contig99051.17251.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 3.990e-20
Identity = 42/83 (50.60%), Postives = 58/83 (69.88%), Query Frame = 0
Query:    3 ASAATLEAGILTAVTVYAPLYDPNTSDANGCDPAGCIADFTRDGDSTTPQSRWSCQPSLGGAGSTCAIIYNLEDPFPIQGLSV 85
            A AA++EA  L  VT  A LYDP  S  +GCDP+GC+A+ TRDGD+T+ +SRW+C+P+LG AGS C I Y L   + +  L++
Sbjct:    3 ADAASVEASTLANVTAVAELYDPRLSAESGCDPSGCVAELTRDGDATSLESRWACKPALGDAGSECRITYGLGIQYQLSSLNI 85          
BLAST of mRNA_H-elongata_contig99051.17251.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 2.600e-19
Identity = 45/84 (53.57%), Postives = 56/84 (66.67%), Query Frame = 0
Query:    3 ASAATLEAGILTAVTVYAPLYDPN-TSDANGCDPAGCIADFTRDGDSTTPQSRWSCQPSLGGAGSTCAIIYNLEDPFPIQGLSV 85
            A AA +EA  L  VTV APLYD   T+   GC P GCI D TRDGD+T+ +SRWSC+P+LG AGS C I Y L   + + GL++
Sbjct:   21 ALAAVVEASTLATVTVAAPLYDTTVTASDGGCSPTGCIGDNTRDGDATSVESRWSCKPALGDAGSVCRITYGLGIQYQLTGLNI 104          
BLAST of mRNA_H-elongata_contig99051.17251.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 9.120e-14
Identity = 38/72 (52.78%), Postives = 45/72 (62.50%), Query Frame = 0
Query:   14 TAVTVYAPLYDPNTSDANGCDPAGCIADFTRDGDSTTPQSRWSCQPSLGGAGSTCAIIYNLEDPFPIQGLSV 85
            T VT  A L+DP  +  NGCDPAGC A  TRDGD T   SRWSC  +LGG G+ C+I Y+L   F +  L V
Sbjct:  249 TTVTTTADLFDPALAIDNGCDPAGCTAALTRDGD-TGDASRWSCATNLGGEGAVCSISYDLGREFGLDELRV 319          
BLAST of mRNA_H-elongata_contig99051.17251.1 vs. uniprot
Match: D7FL48_ECTSI (Leucine rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 9.550e-12
Identity = 38/78 (48.72%), Postives = 44/78 (56.41%), Query Frame = 0
Query:    8 LEAGILTAVTVYAPLYDPNTSDANGCDPAGCIADFTRDGDSTTPQSRWSCQPSLGGAGSTCAIIYNLEDPFPIQGLSV 85
            +EAG L  VT  A LYD    D  GCDP GC A  TRDGD  +  SRWSC P LGG    C+I Y+L   + I  L +
Sbjct:  180 VEAGELGTVTATADLYDDRLGDTVGCDPEGCTAALTRDGD-MSEDSRWSCAPELGGL---CSISYDLGAEYSIDELQL 253          
BLAST of mRNA_H-elongata_contig99051.17251.1 vs. uniprot
Match: D7G5L7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L7_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 9.860e-12
Identity = 37/78 (47.44%), Postives = 43/78 (55.13%), Query Frame = 0
Query:    8 LEAGILTAVTVYAPLYDPNTSDANGCDPAGCIADFTRDGDSTTPQSRWSCQPSLGGAGSTCAIIYNLEDPFPIQGLSV 85
            +EAG L  VT  A LYD    D  GCDP GC A  TRDGD  +  SRWSC P LGG    C+I Y+    + I  L +
Sbjct:   42 VEAGELGTVTATADLYDDRLGDTVGCDPDGCTAALTRDGD-MSEDSRWSCAPELGGL---CSISYDRGAEYRIDELQL 115          
BLAST of mRNA_H-elongata_contig99051.17251.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 2.960e-10
Identity = 35/76 (46.05%), Postives = 43/76 (56.58%), Query Frame = 0
Query:    8 LEAGILTAVTVYAPLYDPNTSDANGCDPAGCIADFTRDGDSTTPQSRWSCQPSLGGAGSTCAIIYNLEDPFPIQGL 83
            +EA  +  VT  A LYD    D  GCDP GC A  TRDGD  +  SRWSC P LGG    C+I Y+L   + ++ L
Sbjct:  183 VEAAEMGTVTATADLYDTRLGDTVGCDPEGCTAALTRDGD-MSEGSRWSCAPKLGGP---CSISYDLGAEYNVEQL 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99051.17251.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KFA6_9PHAE2.020e-2255.42F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
D7FTH1_ECTSI4.540e-2153.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KH45_9PHAE3.990e-2050.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KL74_9PHAE2.600e-1953.57F5/8 type C domain-containing protein n=3 Tax=Ecto... [more]
D7FZZ4_ECTSI9.120e-1452.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FL48_ECTSI9.550e-1248.72Leucine rich repeat carbohydrate binding protein n... [more]
D7G5L7_ECTSI9.860e-1247.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1V3_9PHAE2.960e-1046.05F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig99051contigH-elongata_contig99051:266..984 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig99051.17251.1mRNA_H-elongata_contig99051.17251.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig99051 265..984 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig99051.17251.1 ID=prot_H-elongata_contig99051.17251.1|Name=mRNA_H-elongata_contig99051.17251.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp
ALASAATLEAGILTAVTVYAPLYDPNTSDANGCDPAGCIADFTRDGDSTT
PQSRWSCQPSLGGAGSTCAIIYNLEDPFPIQGLSV
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