prot_H-elongata_contig98954.17241.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98954.17241.1
Unique Nameprot_H-elongata_contig98954.17241.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length58
Homology
BLAST of mRNA_H-elongata_contig98954.17241.1 vs. uniprot
Match: D7FR67_ECTSI (Ubiquitin family protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR67_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 2.830e-11
Identity = 31/46 (67.39%), Postives = 39/46 (84.78%), Query Frame = 0
Query:    1 QIDLDATVLAFKHKISAQAGVPTEQQRLIFKGRVMKEDQNTIGSYS 46
            ++D +ATVLAFK KIS +AGV  E QRLI+KGRVMKEDQ+T+ SY+
Sbjct:   19 EVDTEATVLAFKQKISEKAGVAPELQRLIYKGRVMKEDQDTLASYT 64          
BLAST of mRNA_H-elongata_contig98954.17241.1 vs. uniprot
Match: A0A6J5VFU0_PRUAR (Ubiquitin-like domain-containing protein n=1 Tax=Prunus armeniaca TaxID=36596 RepID=A0A6J5VFU0_PRUAR)

HSP 1 Score: 56.6 bits (135), Expect = 4.340e-9
Identity = 24/53 (45.28%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    1 QIDLDATVLAFKHKISAQAGVPTEQQRLIFKGRVMKEDQNTIGSYSEFNLYTC 53
            QI+L++TV +FK  +S++  +P +QQRLI+KGR++++DQ T+ SY  F+ + C
Sbjct:   38 QINLESTVGSFKEVLSSKCDIPADQQRLIYKGRILRDDQ-TVQSYDGFSFHCC 89          
BLAST of mRNA_H-elongata_contig98954.17241.1 vs. uniprot
Match: A0A2G3CKN8_CAPCH (Ubiquitin domain-containing protein DSK2b n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3CKN8_CAPCH)

HSP 1 Score: 57.0 bits (136), Expect = 5.520e-9
Identity = 28/52 (53.85%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 QIDLDATVLAFKHKISAQAGVPTEQQRLIFKGRVMKEDQNTIGSYSEFNLYT 52
            Q++LD+TV +FK K+   A VP EQQRLI+KGR++K+DQ T+ SY E   Y+
Sbjct:   38 QVNLDSTVGSFKSKLIEHANVPVEQQRLIYKGRILKDDQ-TLQSYVERRNYS 88          
BLAST of mRNA_H-elongata_contig98954.17241.1 vs. uniprot
Match: A0A443NJ10_9MAGN (Ubiquitin domain-containing protein DSK2a-like protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NJ10_9MAGN)

HSP 1 Score: 55.5 bits (132), Expect = 1.800e-7
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 QIDLDATVLAFKHKISAQAGVPTEQQRLIFKGRVMKEDQNTIGSYSEFNL 50
            Q  LDATV AFK  ++    VP EQQRLI+KGR++K+DQ T+ SY E  L
Sbjct:   84 QTSLDATVGAFKAVLAGNCDVPVEQQRLIYKGRILKDDQ-TLESYGEIGL 132          
BLAST of mRNA_H-elongata_contig98954.17241.1 vs. uniprot
Match: A0A6P5EUJ7_ANACO (ubiquitin domain-containing protein DSK2a-like n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5EUJ7_ANACO)

HSP 1 Score: 55.1 bits (131), Expect = 2.470e-7
Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 QIDLDATVLAFKHKISAQAGVPTEQQRLIFKGRVMKEDQNTIGSY 45
            Q+DL+ATV AFK  ++    VP EQQRLI+KGR++K+DQ T+ SY
Sbjct:   96 QVDLEATVGAFKGVVAGSCDVPAEQQRLIYKGRILKDDQ-TLASY 139          
BLAST of mRNA_H-elongata_contig98954.17241.1 vs. uniprot
Match: A0A8J4QX17_9ROSI (Ubiquitin-like domain-containing protein n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4QX17_9ROSI)

HSP 1 Score: 52.0 bits (123), Expect = 3.060e-7
Identity = 23/50 (46.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:    1 QIDLDATVLAFKHKISAQAGVPTEQQRLIFKGRVMKEDQNTIGSYSEFNL 50
            QI LD++V +FK  ++ ++  PT+QQRLI+KGR++K+DQ T+ SY ++++
Sbjct:   34 QISLDSSVGSFKSILAEKSDTPTDQQRLIYKGRILKDDQ-TLRSYGKYSV 82          
BLAST of mRNA_H-elongata_contig98954.17241.1 vs. uniprot
Match: A0A438DBV6_VITVI (Ubiquitin domain-containing protein DSK2b n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DBV6_VITVI)

HSP 1 Score: 52.0 bits (123), Expect = 3.130e-7
Identity = 25/45 (55.56%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 QIDLDATVLAFKHKISAQAGVPTEQQRLIFKGRVMKEDQNTIGSY 45
            QI L++TV AFK  +S    +P EQQRLI+KGR++K+DQ T+ SY
Sbjct:   34 QISLESTVRAFKAVLSQNCDIPAEQQRLIYKGRILKDDQ-TLESY 77          
BLAST of mRNA_H-elongata_contig98954.17241.1 vs. uniprot
Match: A0A5A7UB13_CUCME (Ubiquitin domain-containing protein DSK2a-like isoform X1 n=7 Tax=Cucurbitaceae TaxID=3650 RepID=A0A5A7UB13_CUCME)

HSP 1 Score: 53.9 bits (128), Expect = 6.300e-7
Identity = 25/49 (51.02%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    2 IDLDATVLAFKHKISAQAGVPTEQQRLIFKGRVMKEDQNTIGSYSEFNL 50
            ++LD+TV +FK  +S Q+ VP +QQRLI+KGR++K+DQ T+ SY  F++
Sbjct:   39 VNLDSTVGSFKSILSHQSEVPADQQRLIYKGRILKDDQ-TLQSYGAFSI 86          
BLAST of mRNA_H-elongata_contig98954.17241.1 vs. uniprot
Match: A0A5C7HS49_9ROSI (Uncharacterized protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HS49_9ROSI)

HSP 1 Score: 53.5 bits (127), Expect = 8.620e-7
Identity = 24/47 (51.06%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 QIDLDATVLAFKHKISAQAGVPTEQQRLIFKGRVMKEDQNTIGSYSE 47
            +IDL++TV +FK  +S ++ +PT+QQRLI+KGR++K+DQ T+ SY +
Sbjct:   38 EIDLESTVESFKGVLSEKSDIPTDQQRLIYKGRILKDDQ-TLKSYGK 83          
BLAST of mRNA_H-elongata_contig98954.17241.1 vs. uniprot
Match: A0A445GHF8_GLYSO (Ubiquitin domain-containing protein DSK2a n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445GHF8_GLYSO)

HSP 1 Score: 50.4 bits (119), Expect = 1.130e-6
Identity = 23/47 (48.94%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 QIDLDATVLAFKHKISAQAGVPTEQQRLIFKGRVMKEDQNTIGSYSE 47
            QI +D+TV +FK  ++    +P EQQRLI+KGR++K+DQ T+ SY +
Sbjct:   30 QIAVDSTVSSFKDVVARNCDIPAEQQRLIYKGRILKDDQ-TLRSYGK 75          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98954.17241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR67_ECTSI2.830e-1167.39Ubiquitin family protein, expressed n=1 Tax=Ectoca... [more]
A0A6J5VFU0_PRUAR4.340e-945.28Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A2G3CKN8_CAPCH5.520e-953.85Ubiquitin domain-containing protein DSK2b n=1 Tax=... [more]
A0A443NJ10_9MAGN1.800e-756.00Ubiquitin domain-containing protein DSK2a-like pro... [more]
A0A6P5EUJ7_ANACO2.470e-757.78ubiquitin domain-containing protein DSK2a-like n=3... [more]
A0A8J4QX17_9ROSI3.060e-746.00Ubiquitin-like domain-containing protein n=1 Tax=C... [more]
A0A438DBV6_VITVI3.130e-755.56Ubiquitin domain-containing protein DSK2b n=1 Tax=... [more]
A0A5A7UB13_CUCME6.300e-751.02Ubiquitin domain-containing protein DSK2a-like iso... [more]
A0A5C7HS49_9ROSI8.620e-751.06Uncharacterized protein n=1 Tax=Acer yangbiense Ta... [more]
A0A445GHF8_GLYSO1.130e-648.94Ubiquitin domain-containing protein DSK2a n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 1..50
e-value: 5.2E-12
score: 47.5
NoneNo IPR availablePANTHERPTHR15204SCYTHE/BAT3coord: 2..42
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 2..45
e-value: 1.5E-13
score: 50.3
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 1..46
score: 13.511
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 12..37
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98954contigH-elongata_contig98954:2013..2186 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98954.17241.1mRNA_H-elongata_contig98954.17241.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98954 2013..2186 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98954.17241.1 ID=prot_H-elongata_contig98954.17241.1|Name=mRNA_H-elongata_contig98954.17241.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
QIDLDATVLAFKHKISAQAGVPTEQQRLIFKGRVMKEDQNTIGSYSEFNL
YTCIYTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR019954Ubiquitin_CS
IPR029071Ubiquitin-like_domsf