prot_H-elongata_contig98901.17235.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98901.17235.1
Unique Nameprot_H-elongata_contig98901.17235.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
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BLAST of mRNA_H-elongata_contig98901.17235.1 vs. uniprot
Match: A0A6H5JI65_9PHAE (RRF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI65_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 3.180e-5
Identity = 24/38 (63.16%), Postives = 32/38 (84.21%), Query Frame = 0 
Query:    1 MAGGDFNLDGTMASAQDKMEKSAESVQLSLETLRTGRA 38
            MA  +F+ D  +ASAQ++M+KS ESV+L+LETLRTGRA
Sbjct:   61 MAADEFDGDAVLASAQERMDKSVESVRLNLETLRTGRA 98
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98901.17235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JI65_9PHAE3.180e-563.16RRF domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98901contigH-elongata_contig98901:130..838 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98901.17235.1mRNA_H-elongata_contig98901.17235.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98901 43..2293 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98901.17235.1 ID=prot_H-elongata_contig98901.17235.1|Name=mRNA_H-elongata_contig98901.17235.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
MAGGDFNLDGTMASAQDKMEKSAESVQLSLETLRTGRARHEQRKIPTYQ*
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