prot_H-elongata_contig9885.17228.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig9885.17228.1 vs. uniprot
Match: D8LU88_ECTSI (Ubiquitin domain-containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU88_ECTSI) HSP 1 Score: 265 bits (678), Expect = 3.400e-77 Identity = 160/274 (58.39%), Postives = 185/274 (67.52%), Query Frame = 0
Query: 21 GDAVTLPAEVVGEPQHMDQLFDMLEIDLGMXXXXXXX-----------RGMVGENHANLRAEINASACRVGTLSKRQQEDTAAAGPREAVDGVQQSHDEYCGSNAE---VDPG-HFNASLWHILQSLPVDLTVVRNLRSLRKAETSWDALLDTSRCYRFVYALQVVDAFCTSRLNLSGPKEVEALLSWSLRFCRLGGVVHLVSSLKVVLEAVGVVGEAGAGCPDASRLEAWTLSAALVARVLHRLLQLDAAYFKGCGPEERWPPAALFHDSLLH 279
G + T AE VGEPQHMDQLFDMLE+DLGM XXXXX R + N A E A G+ R AA R A QS + G A ++P +NASLWHILQ+LP+D TV+R+LRSL KAE+SWDALLD SRCYRFVYALQVVDAFCTSR NLSGPK VE++L+W LRFCRLGGV HLV++L+VV V V EAG G +ASRLEAWTLSAAL++RVLHRL QL+A+YF+ C P ERW PA LFH S H
Sbjct: 1749 GVSATAAAETVGEPQHMDQLFDMLELDLGMDGXXXXXXXXXXXPGGDSRRGLPPNTAVASHEPGGEARAWGSGGLRDGGQCAAERRRGAGSVAGQSKGAWRGGAARGGGIEPAVDYNASLWHILQALPMDPTVLRDLRSLHKAESSWDALLDPSRCYRFVYALQVVDAFCTSRANLSGPKSVESVLAWVLRFCRLGGVEHLVAALEVVRRKVQAVNEAG-GAAEASRLEAWTLSAALLSRVLHRLFQLNASYFESCPPGERWSPATLFHASPPH 2021
BLAST of mRNA_H-elongata_contig9885.17228.1 vs. uniprot
Match: A0A6H5KTV6_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV6_9PHAE) HSP 1 Score: 256 bits (655), Expect = 4.100e-74 Identity = 156/279 (55.91%), Postives = 180/279 (64.52%), Query Frame = 0
Query: 21 GDAVTLPAEVVGEPQHMDQLFDMLEIDLGMXXXXXXX------------RGMVGENHANLRAEINASACRVGTLSKRQQEDTAAAGPREAVDGVQQSHDEYCGSNAEVDPG--------HFNASLWHILQSLPVDLTVVRNLRSLRKAETSWDALLDTSRCYRFVYALQVVDAFCTSRLNLSGPKEVEALLSWSLRFCRLGGVVHLVSSLKVVLEAVGVVGEAGAGCPDASRLEAWTLSAALVARVLHRLLQLDAAYFKGCGPEERWPPAALFHDSLLH 279
G + T AE VGEPQHM+QLFDMLE+DLGM XXXX R + N A E G+ S R AA A QS + G G +NASLWHILQ+LP+D TV+R+LRSL KAE+SWDALLD SRCYRFVYALQVVDAFCTSR NLSGPK VE++L+W LRFCRLGGV HLV++L+VV V V EAG G +ASRLEAWTLSAAL++RVLHRL QL+A+YF+ C P ERW PA LFH S H
Sbjct: 730 GVSATAAAETVGEPQHMNQLFDMLELDLGMDGGXXXXXXXXXXSAGGDSRRGLPPNTAVAWHEPGGEGRAWGSGSLRDGVQCAAERRTGAGSMAGQSRGAWRGGXXXXGGGGGGVEPTVDYNASLWHILQALPMDPTVLRDLRSLHKAESSWDALLDPSRCYRFVYALQVVDAFCTSRTNLSGPKSVESVLAWVLRFCRLGGVEHLVTALEVVRGKVQAVNEAG-GAAEASRLEAWTLSAALLSRVLHRLFQLNASYFESCPPGERWSPATLFHASPPH 1007 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9885.17228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig9885.17228.1 ID=prot_H-elongata_contig9885.17228.1|Name=mRNA_H-elongata_contig9885.17228.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=285bpback to top |