prot_H-elongata_contig98849.17227.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98849.17227.1
Unique Nameprot_H-elongata_contig98849.17227.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length107
Homology
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BLAST of mRNA_H-elongata_contig98849.17227.1 vs. uniprot
Match: D8LNC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC6_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 2.490e-43
Identity = 84/100 (84.00%), Postives = 91/100 (91.00%), Query Frame = 0 
Query:    1 PFTKAKVDAIKAEEALAHELKNVVQSPASLPLPILRRCVELVMTAHRGRGSLAAALGSVSRAEVLGAVLRKGGELSEAEGGEVAADWAELQAEFIAMAKE 100
            P  + K DAI+AEEALA ELKN++QSPASLPLPILRRC+ELVMTAHRGRG+LA ALGSVSRAEVLGAVL+KGGELSEAEGGE AADWA LQ EFIAMAKE
Sbjct:  698 PSEQVKADAIRAEEALASELKNILQSPASLPLPILRRCIELVMTAHRGRGTLAGALGSVSRAEVLGAVLQKGGELSEAEGGEAAADWAALQTEFIAMAKE 797
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BLAST of mRNA_H-elongata_contig98849.17227.1 vs. uniprot
Match: A0A6H5KT64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT64_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 2.820e-42
Identity = 83/100 (83.00%), Postives = 91/100 (91.00%), Query Frame = 0 
Query:    1 PFTKAKVDAIKAEEALAHELKNVVQSPASLPLPILRRCVELVMTAHRGRGSLAAALGSVSRAEVLGAVLRKGGELSEAEGGEVAADWAELQAEFIAMAKE 100
            P  + K DAI+AEEALA ELK+++QSPASLPLPILRRC+ELVMTAHRGRG+LA ALGSVSRAEVLGAVL+KGGELSEAEG E AADWA LQAEFIAMAKE
Sbjct:  913 PSEQVKADAIRAEEALASELKSILQSPASLPLPILRRCIELVMTAHRGRGTLAGALGSVSRAEVLGAVLQKGGELSEAEGAEAAADWAALQAEFIAMAKE 1012
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BLAST of mRNA_H-elongata_contig98849.17227.1 vs. uniprot
Match: A0A835ZDS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS1_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.870e-13
Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 0 
Query:   20 LKNVVQSPASLP-LPILRRCVELVMTAHRGRGSLAAALGSVSRAEVLGAVLRKGGELSEAEGGEVAADWAELQAEFIAMAKEA 101
            L+ +VQS    P L IL+RC+ELVM AHRGRGSL  AL   +RAE + AVLR+G + S A   E   +W+ LQA+F+A A +A
Sbjct:  701 LRGLVQSAQPPPPLSILKRCLELVMAAHRGRGSLKPALADRARAEAMHAVLRRGAQASVATSAEAVEEWSRLQADFLAEATQA 783
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98849.17227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LNC6_ECTSI2.490e-4384.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KT64_9PHAE2.820e-4283.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZDS1_9STRA2.870e-1351.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98849contigH-elongata_contig98849:2007..2327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98849.17227.1mRNA_H-elongata_contig98849.17227.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98849 2007..2327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98849.17227.1 ID=prot_H-elongata_contig98849.17227.1|Name=mRNA_H-elongata_contig98849.17227.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
PFTKAKVDAIKAEEALAHELKNVVQSPASLPLPILRRCVELVMTAHRGRG
SLAAALGSVSRAEVLGAVLRKGGELSEAEGGEVAADWAELQAEFIAMAKE
APTGSQ*
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