prot_H-elongata_contig98840.17225.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98840.17225.1
Unique Nameprot_H-elongata_contig98840.17225.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length102
Homology
BLAST of mRNA_H-elongata_contig98840.17225.1 vs. uniprot
Match: A0A6H5KJM3_9PHAE (Anaphase-promoting complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM3_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.350e-38
Identity = 76/98 (77.55%), Postives = 83/98 (84.69%), Query Frame = 0
Query:    6 QDVLLETVANPVRRYLRARKDTVRCIVASLTDETSGDLYEELRRQ-ASPEMQHWFTDDDDDGPVAPNWEPASRDADPASGNRSGSDILTMLVSIYGSK 102
            +DVLLETVA PVR YL+ RKDTVRCIVASLTDETSGDLYEELRRQ A P  +   +D+DD GPVAPNWEPASRDADP  G+R G DIL+MLVSIYGSK
Sbjct:   55 KDVLLETVAGPVRLYLQGRKDTVRCIVASLTDETSGDLYEELRRQDARPLDRDDASDEDDGGPVAPNWEPASRDADPTKGSRGGGDILSMLVSIYGSK 152          
BLAST of mRNA_H-elongata_contig98840.17225.1 vs. uniprot
Match: A0A3M6VMT7_9STRA (Anaphase-promoting complex subunit 2 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VMT7_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.860e-21
Identity = 54/97 (55.67%), Postives = 69/97 (71.13%), Query Frame = 0
Query:    8 VLLETVANPVRRYLRARKDTVRCIVASLTDETSGDLYEELRRQASPEMQHWFTDDDDDGPVAPNWEPASRDADP--ASGNRSGSDILTMLVSIYGSK 102
            VLLE ++ PV+ YLR RKDTVRCIV SLTDE +GDL+EELRR     +Q+    DDD+     +WEPA  +ADP  +S +RS  DIL +LV+IYGS+
Sbjct:  356 VLLEALSGPVKEYLRKRKDTVRCIVQSLTDEHNGDLFEELRRDNMRVIQYGDDSDDDEDISPDSWEPAPIEADPTKSSQSRSSDDILRILVNIYGSR 452          
BLAST of mRNA_H-elongata_contig98840.17225.1 vs. uniprot
Match: A0A0P1AJ53_PLAHL (Anaphase-promoting complex subunit 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ53_PLAHL)

HSP 1 Score: 97.1 bits (240), Expect = 2.540e-21
Identity = 56/98 (57.14%), Postives = 71/98 (72.45%), Query Frame = 0
Query:    8 VLLETVANPVRRYLRARKDTVRCIVASLTDETSGDLYEELRRQASPEMQHWFTDDDDDGPVAPN-WEPASRDADP--ASGNRSGSDILTMLVSIYGSK 102
            VLLE ++ P++ YLR RKDTVRCIV SLT+E SGDL+EELRR     +QH   D DDD  ++P+ WEP   DADP  +S +RS  DIL +LV+IYGS+
Sbjct:  349 VLLEGLSGPIKEYLRKRKDTVRCIVQSLTEEQSGDLFEELRRDNMRMIQH-DDDSDDDEDISPDSWEPDPIDADPTKSSRSRSSDDILRILVNIYGSR 445          
BLAST of mRNA_H-elongata_contig98840.17225.1 vs. uniprot
Match: G5A4Q8_PHYSP (Anaphase-promoting complex subunit 2 n=4 Tax=Phytophthora TaxID=4783 RepID=G5A4Q8_PHYSP)

HSP 1 Score: 96.3 bits (238), Expect = 4.710e-21
Identity = 56/98 (57.14%), Postives = 70/98 (71.43%), Query Frame = 0
Query:    8 VLLETVANPVRRYLRARKDTVRCIVASLTDETSGDLYEELRRQASPEMQHWFTDDDDDGPVAPN-WEPASRDADPA--SGNRSGSDILTMLVSIYGSK 102
            VLLE ++ PV+ YLR RKDTVRCIV SLTDE +GDL+EELRR     +QH   D DDD  ++P+ WEP   +ADP   S +RS  DIL +LV+IYGS+
Sbjct:  354 VLLEALSGPVKEYLRKRKDTVRCIVQSLTDEQNGDLFEELRRDNMRIIQH-DDDSDDDEDISPDTWEPDPIEADPTKTSRSRSSDDILRILVNIYGSR 450          
BLAST of mRNA_H-elongata_contig98840.17225.1 vs. uniprot
Match: A0A448ZFG1_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFG1_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 3.670e-19
Identity = 57/106 (53.77%), Postives = 71/106 (66.98%), Query Frame = 0
Query:    5 SQDVLLETVANPVRRYLRARKDTVRCIVASLTD-ETSGDLYEELRRQASPEMQHWFTD-DDDDGPVAPNWEPA-----SRDADPASGNRSGS-DILTMLVSIYGSK 102
            + D LL+ VA PVR YLR R++TVRCI+ SLTD E  GDLYEELRRQ +  ++H   D DD++ P   NW PA      R +  A+G +  S DIL+MLVSIYGSK
Sbjct:  304 ASDRLLQVVAEPVRSYLRQRQNTVRCIITSLTDSEVGGDLYEELRRQDARPLEHGEADSDDEEEPPDMNWTPAPPISKERGSFLATGTKGNSADILSMLVSIYGSK 409          
BLAST of mRNA_H-elongata_contig98840.17225.1 vs. uniprot
Match: F0YL58_AURAN (Anaphase-promoting complex subunit 2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL58_AURAN)

HSP 1 Score: 90.5 bits (223), Expect = 4.980e-19
Identity = 49/97 (50.52%), Postives = 68/97 (70.10%), Query Frame = 0
Query:    6 QDVLLETVANPVRRYLRARKDTVRCIVASLTDETSGDLYEELRRQASPEMQHWFTDDDDDGPVAPNWEPASRDADPASGNRSGSDILTMLVSIYGSK 102
            +D+LL+ VA PVR YL+ RKDTVRCIVA+LTDE SG+LYEEL R  +P++ +    +D+      +W P S  +  A+ +  G DIL+ML+SIYG+K
Sbjct:  290 RDILLDVVARPVRVYLQRRKDTVRCIVANLTDELSGELYEELHRIDAPQVDYVGDSEDEIAEAGIDWAPRSNKSRLANSSSVG-DILSMLISIYGTK 385          
BLAST of mRNA_H-elongata_contig98840.17225.1 vs. uniprot
Match: A0A225VZU6_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VZU6_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 3.230e-18
Identity = 55/103 (53.40%), Postives = 68/103 (66.02%), Query Frame = 0
Query:    8 VLLETVANPVRRYLRARKDTVRCIVASLTDETSGDLYEELRRQASPEMQHWFTDDDDDGPVAPN-WEPASRDADP-------ASGNRSGSDILTMLVSIYGSK 102
            VLLE +++PV+ YLR RKDTVRCIV SLTDE  GDL+EELRR     +QH   D DDD  ++P+ WEP     DP        S +RS  DIL +LV+IYGS+
Sbjct:  348 VLLEALSDPVKEYLRKRKDTVRCIVQSLTDEQHGDLFEELRRDNMRIIQH-DDDSDDDEDISPDSWEP-----DPXXXXXTKTSRSRSSDDILRILVNIYGSR 444          
BLAST of mRNA_H-elongata_contig98840.17225.1 vs. uniprot
Match: D0N4D6_PHYIT (Anaphase-promoting complex subunit 2 n=11 Tax=Phytophthora TaxID=4783 RepID=D0N4D6_PHYIT)

HSP 1 Score: 87.8 bits (216), Expect = 4.410e-18
Identity = 56/103 (54.37%), Postives = 68/103 (66.02%), Query Frame = 0
Query:    8 VLLETVANPVRRYLRARKDTVRCIVASLTDETSGDLYEELRRQASPEMQHWFTDDDDDGPVAPN-WEPASRDADP-------ASGNRSGSDILTMLVSIYGSK 102
            VLLE ++ PV+ YLR RKDTVRCIV SLTDE SGDL+EELRR     +QH   D DDD  ++P+ WEP     DP        S +RS  DIL +LV+IYGS+
Sbjct:  353 VLLEALSCPVKEYLRKRKDTVRCIVQSLTDEQSGDLFEELRRDNMRIIQH-DDDSDDDEDMSPDAWEP-----DPIXXXXTKTSRSRSSDDILRILVNIYGSR 449          
BLAST of mRNA_H-elongata_contig98840.17225.1 vs. uniprot
Match: A0A1E7F4J4_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4J4_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 7.910e-18
Identity = 53/103 (51.46%), Postives = 67/103 (65.05%), Query Frame = 0
Query:    7 DVLLETVANPVRRYLRARKDTVRCIVASLTD-ETSGDLYEELRRQASPEMQHWFTD-DDDDGPVAPNWEPA-----SRDADPASGNRSGSDILTMLVSIYGSK 102
            D LL+ VA PVR YLR R++TVRCI+ SLTD E  GDLYEELRRQ +  ++H   D DD++ P   +W+P       R     +G  +  DIL+MLVSIYGSK
Sbjct:  120 DRLLQVVAEPVRSYLRQRENTVRCIITSLTDAEVGGDLYEELRRQDARPLEHGQADSDDEEEPPDMDWQPLPPISKERGNFLVTGTGASGDILSMLVSIYGSK 222          
BLAST of mRNA_H-elongata_contig98840.17225.1 vs. uniprot
Match: A0A2D4BN90_PYTIN (Anaphase-promoting complex subunit 2 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BN90_PYTIN)

HSP 1 Score: 87.0 bits (214), Expect = 8.270e-18
Identity = 55/100 (55.00%), Postives = 70/100 (70.00%), Query Frame = 0
Query:    8 VLLETVANPVRRYLRARKDTVRCIVASLTDETSGDLYEELRRQASPEMQHWFTDDDDDGP--VAPN-WEPASRDADPA--SGNRSGSDILTMLVSIYGSK 102
            VLLET++ PV+ YL+ RKDTVRCIV SLTDE + DL+EELRR    EM+    DDD      ++P+ WEP   DADP+  S +RS  DIL +LV+IYGS+
Sbjct:  402 VLLETLSAPVKEYLKQRKDTVRCIVTSLTDEENSDLFEELRRV---EMRVIQQDDDSXXXEDISPDLWEPDPIDADPSKTSRSRSSDDILRILVNIYGSR 498          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98840.17225.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJM3_9PHAE1.350e-3877.55Anaphase-promoting complex subunit 2 n=1 Tax=Ectoc... [more]
A0A3M6VMT7_9STRA1.860e-2155.67Anaphase-promoting complex subunit 2 n=2 Tax=Peron... [more]
A0A0P1AJ53_PLAHL2.540e-2157.14Anaphase-promoting complex subunit 2 n=1 Tax=Plasm... [more]
G5A4Q8_PHYSP4.710e-2157.14Anaphase-promoting complex subunit 2 n=4 Tax=Phyto... [more]
A0A448ZFG1_9STRA3.670e-1953.77Anaphase-promoting complex subunit 2 n=1 Tax=Pseud... [more]
F0YL58_AURAN4.980e-1950.52Anaphase-promoting complex subunit 2 n=1 Tax=Aureo... [more]
A0A225VZU6_9STRA3.230e-1853.40Anaphase-promoting complex subunit 2 n=1 Tax=Phyto... [more]
D0N4D6_PHYIT4.410e-1854.37Anaphase-promoting complex subunit 2 n=11 Tax=Phyt... [more]
A0A1E7F4J4_9STRA7.910e-1851.46Anaphase-promoting complex subunit 2 n=1 Tax=Fragi... [more]
A0A2D4BN90_PYTIN8.270e-1855.00Anaphase-promoting complex subunit 2 n=2 Tax=Pythi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45957FAMILY NOT NAMEDcoord: 7..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98840contigH-elongata_contig98840:468..1586 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98840.17225.1mRNA_H-elongata_contig98840.17225.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98840 468..1586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98840.17225.1 ID=prot_H-elongata_contig98840.17225.1|Name=mRNA_H-elongata_contig98840.17225.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=102bp
RARSSQDVLLETVANPVRRYLRARKDTVRCIVASLTDETSGDLYEELRRQ
ASPEMQHWFTDDDDDGPVAPNWEPASRDADPASGNRSGSDILTMLVSIYG
SK
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