prot_H-elongata_contig988.17221.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig988.17221.1
Unique Nameprot_H-elongata_contig988.17221.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length335
Homology
BLAST of mRNA_H-elongata_contig988.17221.1 vs. uniprot
Match: A0A6H5KTW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTW1_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 6.970e-46
Identity = 182/359 (50.70%), Postives = 201/359 (55.99%), Query Frame = 0
Query:    1 MFGLPLVCKACYDGDSTPAYDDPPVNDDDDE-SPTPAPIEEASVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEETDTPYVEQEGVPETMSPVDESGGFSYSFTFDITPAPSSATCTACDSASMVLTADDWEELEDAGYDLVCDPDCYESVALEGCGAFGLDIECRAVQLETDDFNDDSGSGSGXXXXXXXXXXTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------AGSCSVEEEARCADISPAQEEALAAYDNGGKVIVCDPTCVDGVSDPTHCNYFGLGQVCRGCGSCSTCTACP 334
            +FGLPLVCKACYDGD TPAYDD PV+ D    S TPAP        XXXXXXX          XXXXXX        XXXXXXXXXXXXXX                        P  E E         D          FD         C+ C+ A+ +LT +DW  LE+ G +LVCDPDCYE+  L+GCGAFGLD ECR V++  DD   + G   G         X  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                        +GSC+  E A CADISPAQEEALA YD GGKVIVCDPTC+ G  D +HCNYFGLGQ+CRGCGSCS C  CP
Sbjct:   63 IFGLPLVCKACYDGDGTPAYDDDPVDGDGTTPSTTPAPAXXXXXXXXXXXXXXVMPVAAPTPEXXXXXXTLEPVMPVXXXXXXXXXXXXXXAG----------------------PTSEPEXXXXXXXXYD----------FD--------DCSPCEEATEILTMEDWIALENDGLELVCDPDCYENSMLDGCGAFGLDTECRTVEI--DDGEGEGGXXXGGTTSSETGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGGGDTTSGSCTDAEIAMCADISPAQEEALAMYDGGGKVIVCDPTCLGG--DISHCNYFGLGQLCRGCGSCSECVPCP 377          
BLAST of mRNA_H-elongata_contig988.17221.1 vs. uniprot
Match: D7G4W7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W7_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 1.590e-34
Identity = 128/246 (52.03%), Postives = 147/246 (59.76%), Query Frame = 0
Query:  152 CTACDSASMVLTADDWEELEDAGYDLVCDPDCYESVALEGCGAFGLDIECRAVQLETDD--------FNDDSGSGSGXXXXXXXXXXTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAG-------------------------------------------------------SCSVEEEARCADISPAQEEALAAYDNGGKVIVCDPTCVDGVSDPTHCNYFGLGQVCRGCGSCSTCTACP 334
            C+ C+ A+ +LT +DW  LE+ G +LVCDPDCYE+  L+GCGAFGLDIECRAV+++  +            S +G+ XXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                         SC+  E A CADISPAQEEALA YD GGKVIVCDPTC+    D +HCNYFGLGQ+CRGCGSCS C  CP
Sbjct:  169 CSPCEEATEMLTMEDWIALENDGLELVCDPDCYENSMLDGCGAFGLDIECRAVEIDDGEGXXXXXXXXTTSSETGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCTEAEIAMCADISPAQEEALAMYDGGGKVIVCDPTCLG--EDISHCNYFGLGQLCRGCGSCSGCDPCP 412          
BLAST of mRNA_H-elongata_contig988.17221.1 vs. uniprot
Match: D7FTU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU6_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 1.850e-20
Identity = 41/70 (58.57%), Postives = 54/70 (77.14%), Query Frame = 0
Query:  265 GSCSVEEEARCADISPAQEEALAAYDNGGKVIVCDPTCVDGVSDPTHCNYFGLGQVCRGCGSCSTCTACP 334
            G+   +E + C++++  Q   LA+YDNGGK +VCDP+C+DGV+DP HCNYFGLGQ+CRGCG CS C  CP
Sbjct: 1307 GAVDDDECSVCSNLTDEQVAVLASYDNGGKQVVCDPSCLDGVTDPLHCNYFGLGQICRGCGECSLCEPCP 1376          
BLAST of mRNA_H-elongata_contig988.17221.1 vs. uniprot
Match: A0A6H5L1V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V0_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.490e-19
Identity = 39/64 (60.94%), Postives = 51/64 (79.69%), Query Frame = 0
Query:  265 GSCSVEEEARCADISPAQEEALAAYDNGGKVIVCDPTCVDGVSDPTHCNYFGLGQVCRGCGSCS 328
            G+   +E + C++++  Q   LA+YDNGGK +VCDPTC+DGV+DP HCNYFGLGQ+CRGCG CS
Sbjct:    8 GAVDDDECSVCSNLTDEQVAILASYDNGGKQVVCDPTCLDGVTDPLHCNYFGLGQICRGCGDCS 71          
BLAST of mRNA_H-elongata_contig988.17221.1 vs. uniprot
Match: A0A6H5L314_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L314_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.320e-18
Identity = 39/64 (60.94%), Postives = 51/64 (79.69%), Query Frame = 0
Query:  265 GSCSVEEEARCADISPAQEEALAAYDNGGKVIVCDPTCVDGVSDPTHCNYFGLGQVCRGCGSCS 328
            G+   +E + C++++  Q   LA+YDNGGK +VCDPTC+DGV+DP HCNYFGLGQ+CRGCG CS
Sbjct:  424 GAVDDDECSVCSNLTDEQVAILASYDNGGKQVVCDPTCLDGVTDPLHCNYFGLGQICRGCGDCS 487          
BLAST of mRNA_H-elongata_contig988.17221.1 vs. uniprot
Match: D8LI25_ECTSI (Mucin 17-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI25_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 2.350e-11
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 0
Query:  273 ARCADISPAQEEALAAYDNGGKVIVCDPTCVDGVSDPTHCNYFGLGQVCRGCGSCSTCTAC 333
            A C+++S  Q  ALAA+  G K +VCD  C+DGV D   C+YFGLGQ+CRGCG C  C AC
Sbjct: 1181 AACSNLSEVQMLALAAHPGGAKRVVCDSDCLDGV-DVLDCDYFGLGQICRGCGDCDGCEAC 1240          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig988.17221.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KTW1_9PHAE6.970e-4650.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4W7_ECTSI1.590e-3452.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTU6_ECTSI1.850e-2058.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1V0_9PHAE1.490e-1960.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L314_9PHAE1.320e-1860.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI25_ECTSI2.350e-1155.74Mucin 17-like protein n=1 Tax=Ectocarpus siliculos... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig988contigH-elongata_contig988:15265..16486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig988.17221.1mRNA_H-elongata_contig988.17221.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig988 14101..16539 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig988.17221.1 ID=prot_H-elongata_contig988.17221.1|Name=mRNA_H-elongata_contig988.17221.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=335bp
MFGLPLVCKACYDGDSTPAYDDPPVNDDDDESPTPAPIEEASVVEAPTPA
PTEGTYTVMVLTPAPIGEASTVVASTPAPIGEASTVVASTPAPTEDTSTV
VASTPAPTEEETDTPYVEQEGVPETMSPVDESGGFSYSFTFDITPAPSSA
TCTACDSASMVLTADDWEELEDAGYDLVCDPDCYESVALEGCGAFGLDIE
CRAVQLETDDFNDDSGSGSGTGTGTGSGSGTDSGSGTGSGSGTGGGSGTG
SGSGTGSGSGTSSAGSCSVEEEARCADISPAQEEALAAYDNGGKVIVCDP
TCVDGVSDPTHCNYFGLGQVCRGCGSCSTCTACP*
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