prot_H-elongata_contig98761.17218.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98761.17218.1
Unique Nameprot_H-elongata_contig98761.17218.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length55
Homology
BLAST of mRNA_H-elongata_contig98761.17218.1 vs. uniprot
Match: D7G2X6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2X6_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 2.090e-15
Identity = 35/48 (72.92%), Postives = 43/48 (89.58%), Query Frame = 0
Query:    2 AVPVCNALTFVFTAATAMWLGEGVDRPLRKIAGMILVLVGIAICVASK 49
            AVPVCNAL+ VFTAATAM LGE VDRPLR ++G++L L+G+A+CVASK
Sbjct:   88 AVPVCNALSLVFTAATAMALGEKVDRPLRTVSGIVLALMGLAVCVASK 135          
BLAST of mRNA_H-elongata_contig98761.17218.1 vs. uniprot
Match: A0A3R7KFJ3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KFJ3_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 1.220e-10
Identity = 29/53 (54.72%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    2 AVPVCNALTFVFTAATAMWLGEGVDRPLRKIAGMILVLVGIAICVASKVGMAS 54
            AVP+CN+LTFVFTA T+  LGE   RP+    GM+L+L+G+AIC  SK  M++
Sbjct:   86 AVPICNSLTFVFTAITSRLLGEKPQRPISTYTGMVLILLGVAICFNSKQDMSA 138          
BLAST of mRNA_H-elongata_contig98761.17218.1 vs. uniprot
Match: W2P4A6_PHYPR (BCNT-C domain-containing protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2P4A6_PHYPR)

HSP 1 Score: 62.8 bits (151), Expect = 3.850e-10
Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    2 AVPVCNALTFVFTAATAMWLGEGVDRPLRKIAGMILVLVGIAICVASKVGMAS 54
            AVP+CN+LTFVFTA T+  LGE   RP     GM+L+L+G+AIC  SK G++S
Sbjct:   84 AVPICNSLTFVFTAITSRLLGEKPQRPASTYTGMVLILLGVAICFNSKQGISS 136          
BLAST of mRNA_H-elongata_contig98761.17218.1 vs. uniprot
Match: D0MUD0_PHYIT (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MUD0_PHYIT)

HSP 1 Score: 60.1 bits (144), Expect = 4.470e-10
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 0
Query:    2 AVPVCNALTFVFTAATAMWLGEGVDRPLRKIAGMILVLVGIAICVASKVGM 52
            AVP+CN+LTFVFTA T+  LGE   RP     GM+L+L+G+AIC  SK  M
Sbjct:   84 AVPICNSLTFVFTAITSRLLGEKPQRPASTYTGMVLILLGVAICFNSKQDM 134          
BLAST of mRNA_H-elongata_contig98761.17218.1 vs. uniprot
Match: A0A485KPY7_9STRA (Aste57867_9931 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPY7_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 4.660e-10
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    1 MAVPVCNALTFVFTAATAMWLGEGVDRPLRKIAGMILVLVGIAICVASK 49
            MAVP+CN+ TFVFTA T+  LGE    PL    GMILVL+G+AIC  SK
Sbjct:   79 MAVPICNSFTFVFTALTSRLLGERPKNPLFTYCGMILVLIGVAICFHSK 127          
BLAST of mRNA_H-elongata_contig98761.17218.1 vs. uniprot
Match: W7TFX4_9STRA (Proteasome subunit alpha n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFX4_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 7.330e-10
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    1 MAVPVCNALTFVFTAATAMWLGEGVDRPLRKIAGMILVLVGIAICVASK 49
            +AVP+CN+LTFVFTA T+  LGE +DRP R   G+  VLVG+ +CV SK
Sbjct:  314 LAVPLCNSLTFVFTAITSYLLGERLDRPARASLGVFFVLVGVTLCVVSK 362          
BLAST of mRNA_H-elongata_contig98761.17218.1 vs. uniprot
Match: A0A225WLS3_9STRA (Putative membrane protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WLS3_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 9.300e-10
Identity = 28/48 (58.33%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    2 AVPVCNALTFVFTAATAMWLGEGVDRPLRKIAGMILVLVGIAICVASK 49
            AVP+CN+LTFVFTA T+  LGE   RP+    GM L+L+G+AIC  SK
Sbjct:   84 AVPICNSLTFVFTAITSRLLGEKPQRPVSTYTGMFLILLGVAICFDSK 131          
BLAST of mRNA_H-elongata_contig98761.17218.1 vs. uniprot
Match: A0A5D6XQ34_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ34_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.710e-9
Identity = 27/48 (56.25%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    2 AVPVCNALTFVFTAATAMWLGEGVDRPLRKIAGMILVLVGIAICVASK 49
            AVP+CN+LTFVFTA T+  LGE   RP+    GM+L+L+G+ IC  SK
Sbjct:   81 AVPICNSLTFVFTAITSRLLGEAPKRPIWTYTGMVLILLGVLICFDSK 128          
BLAST of mRNA_H-elongata_contig98761.17218.1 vs. uniprot
Match: A0A8K1C6X8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6X8_PYTOL)

HSP 1 Score: 58.5 bits (140), Expect = 1.780e-9
Identity = 27/48 (56.25%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    2 AVPVCNALTFVFTAATAMWLGEGVDRPLRKIAGMILVLVGIAICVASK 49
            AVP+CN+LTFVFTA T+  LGE   RPL    GM+L+L+G+ +C  SK
Sbjct:   85 AVPICNSLTFVFTAMTSRLLGEKPRRPLSTYTGMVLILLGVLLCYQSK 132          
BLAST of mRNA_H-elongata_contig98761.17218.1 vs. uniprot
Match: K3WLG6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLG6_GLOUD)

HSP 1 Score: 58.2 bits (139), Expect = 2.460e-9
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    2 AVPVCNALTFVFTAATAMWLGEGVDRPLRKIAGMILVLVGIAICVASK 49
            AVP+CN+LTFVFTA T+  LGE   RP+   +GM+L+L+G+ IC  SK
Sbjct:   85 AVPICNSLTFVFTAITSRLLGEKPKRPVWTYSGMVLILLGVVICFNSK 132          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98761.17218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2X6_ECTSI2.090e-1572.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A3R7KFJ3_9STRA1.220e-1054.72Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
W2P4A6_PHYPR3.850e-1056.60BCNT-C domain-containing protein n=1 Tax=Phytophth... [more]
D0MUD0_PHYIT4.470e-1056.86Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A485KPY7_9STRA4.660e-1061.22Aste57867_9931 protein n=1 Tax=Aphanomyces stellat... [more]
W7TFX4_9STRA7.330e-1059.18Proteasome subunit alpha n=1 Tax=Nannochloropsis g... [more]
A0A225WLS3_9STRA9.300e-1058.33Putative membrane protein n=1 Tax=Phytophthora meg... [more]
A0A5D6XQ34_9STRA1.710e-956.25Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1C6X8_PYTOL1.780e-956.25Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WLG6_GLOUD2.460e-956.25Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018908Putative transmembrane family 234PFAMPF10639TMEM234coord: 1..46
e-value: 2.4E-10
score: 40.4
IPR018908Putative transmembrane family 234PANTHERPTHR28668FAMILY NOT NAMEDcoord: 1..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableTMHMMTMhelixcoord: 32..51
NoneNo IPR availableTMHMMTMhelixcoord: 5..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98761contigH-elongata_contig98761:2018..2182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98761.17218.1mRNA_H-elongata_contig98761.17218.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98761 2018..2194 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98761.17218.1 ID=prot_H-elongata_contig98761.17218.1|Name=mRNA_H-elongata_contig98761.17218.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp
MAVPVCNALTFVFTAATAMWLGEGVDRPLRKIAGMILVLVGIAICVASKV
GMAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018908TMEM234