prot_H-elongata_contig98472.17195.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98472.17195.1
Unique Nameprot_H-elongata_contig98472.17195.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length117
Homology
BLAST of mRNA_H-elongata_contig98472.17195.1 vs. uniprot
Match: D7FX19_ECTSI (Er lumen protein retaining receptor 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX19_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 6.950e-50
Identity = 84/114 (73.68%), Postives = 96/114 (84.21%), Query Frame = 0
Query:    2 FGFAVLLGLMLVKKHARGVSLKSLELYVVVFASRLVSVMQHEGYLPYDRSGDFVYHAAELISLVVALACVALMLTTLKPSYQKEADSFGALRVPTELGAIYIAVPCLLLAVVRE 115
            FGFAVLLGLML KKHARGVS+KSL+LY VVFASRLVSV+QHEGYLPYDRSGDFVYH AE+ SL +A+ CV L+ T  K +YQ++ DSFGAL VPTE G +YI VPCLLLA+V  
Sbjct:   61 FGFAVLLGLMLAKKHARGVSMKSLQLYAVVFASRLVSVLQHEGYLPYDRSGDFVYHGAEIASLALAVGCVVLISTKFKSTYQQDVDSFGALHVPTEWGTLYIFVPCLLLAIVMH 174          
BLAST of mRNA_H-elongata_contig98472.17195.1 vs. uniprot
Match: A0A836CR66_9STRA (Er lumen protein retaining receptor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR66_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.550e-37
Identity = 63/111 (56.76%), Postives = 92/111 (82.88%), Query Frame = 0
Query:    2 FGFAVLLGLMLVKKHARGVSLKSLELYVVVFASRLVSVMQHEGYLPYDRSGDFVYHAAELISLVVALACVALMLTTLKPSYQKEADSFGALRVPTELGAIYIAVPCLLLAV 112
            FGFA+LL  M +K+HA+GVS K+LE+YV+VF  RLVS+++HEGYLPYD+SGDF+YHAAE++S+ +A AC+  M T  + SYQ++ D+FG++ +P+ LG +Y+ VPC++LAV
Sbjct:   62 FGFALLLVRMFIKQHAKGVSRKTLEMYVLVFFPRLVSILRHEGYLPYDKSGDFIYHAAEMLSMALAAACLFYMHTRFERSYQRDYDTFGSVGLPSHLGTLYMIVPCVVLAV 172          
BLAST of mRNA_H-elongata_contig98472.17195.1 vs. uniprot
Match: A0A835ZJ22_9STRA (Er lumen protein retaining receptor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ22_9STRA)

HSP 1 Score: 135 bits (340), Expect = 8.650e-37
Identity = 65/111 (58.56%), Postives = 86/111 (77.48%), Query Frame = 0
Query:    2 FGFAVLLGLMLVKKHARGVSLKSLELYVVVFASRLVSVMQHEGYLPYDRSGDFVYHAAELISLVVALACVALMLTTLKPSYQKEADSFGALRVPTELGAIYIAVPCLLLAV 112
            FGFA+LL  M +KKHA+GVS K+LELYV VF  RLVS+ +HEGYLPYD+SGDF+YHAAE +SLV AL C+  M T+   SYQ++ D+FG + +P   G +Y+ VPC+++AV
Sbjct:   62 FGFALLLVRMFIKKHAKGVSRKTLELYVFVFLPRLVSIFRHEGYLPYDKSGDFIYHAAEGLSLVGALLCLVFMHTSFARSYQRDYDTFGNIYIPARFGTLYMIVPCVVMAV 172          
BLAST of mRNA_H-elongata_contig98472.17195.1 vs. uniprot
Match: A0A812YBP6_SYMMI (KdelR protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YBP6_SYMMI)

HSP 1 Score: 107 bits (268), Expect = 1.370e-26
Identity = 50/112 (44.64%), Postives = 79/112 (70.54%), Query Frame = 0
Query:    2 FGFAVLLGLMLVKKHARGVSLKSLELYVVVFASRLVSVMQHEGYLPYDRSGDFVYHAAELISLVVALACVALMLTTLKPSYQKEADSFGALRVPTELGAIYIAVPCLLLAVV 113
            FGFA+L   M+  K +RGVS+K+LELY +VF  R++S+ +H+GYLP+D++GD+ YH  E+IS +     + ++   L+ +Y+++ D FG L VP  LG +Y+  PC+LLA+V
Sbjct:    4 FGFALLNFKMINGKSSRGVSVKTLELYAIVFLCRVLSITRHQGYLPFDKTGDWFYHFVEIISFLAVCCAIYILFGPLRSTYERKYDKFGNLNVPDYLGVVYLLGPCVLLAIV 115          
BLAST of mRNA_H-elongata_contig98472.17195.1 vs. uniprot
Match: B8C3M7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3M7_THAPS)

HSP 1 Score: 108 bits (269), Expect = 2.260e-26
Identity = 53/112 (47.32%), Postives = 77/112 (68.75%), Query Frame = 0
Query:    1 MFGFAVLLGLMLVKKHARGVSLKSLELYVVVFASRLVSVMQHEGYLPYDRSGDFVYHAAELISLVVALACVALMLTTLKPSYQKEADSFGALRVPTELGAIYIAVPCLLLAV 112
            MFGF +L     + K A GVS+K+L+LY +VF  RL S+++HEGYLPYD+SGD++YH  E+++LV   + +   +   K +YQ + D FG + VP   GA+Y+AVP +LLAV
Sbjct:   44 MFGFGILNVKTFMSKRATGVSVKTLQLYCLVFFFRLTSIIRHEGYLPYDKSGDWLYHVIEILALVFTASALWGCMVPFKQTYQADQDKFGEMNVPPGAGAVYLAVPVMLLAV 155          
BLAST of mRNA_H-elongata_contig98472.17195.1 vs. uniprot
Match: A0A7S2UQ71_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ71_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.330e-26
Identity = 56/111 (50.45%), Postives = 74/111 (66.67%), Query Frame = 0
Query:    1 MFGFAVLLGLMLVKKHARGVSLKSLELYVVVFASRLVSVMQHEGYLPYDRSGDFVYHAAELISLVVALACVALMLTTLKPSYQKEADSFGALRVPTELGAIYIAVPCLLLA 111
            MFGF +L       K A GVS+KSL+LY +VF  RL S+++HEGYLPYD+SGD+VYH  EL++LV   A +   +   K +YQ + D FG L VP   GA+YIA P L++A
Sbjct:  126 MFGFGILNVKTFKSKRATGVSIKSLQLYCIVFVCRLTSIIRHEGYLPYDKSGDWVYHIIELMALVFTAAALWACMGPFKQTYQSDFDKFGELNVPPGYGAVYIAGPVLVIA 236          
BLAST of mRNA_H-elongata_contig98472.17195.1 vs. uniprot
Match: A0A7S2H0H3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H0H3_9STRA)

HSP 1 Score: 109 bits (272), Expect = 3.550e-26
Identity = 53/111 (47.75%), Postives = 78/111 (70.27%), Query Frame = 0
Query:    1 MFGFAVLLGLMLVKKHARGVSLKSLELYVVVFASRLVSVMQHEGYLPYDRSGDFVYHAAELISLVVALACVALMLTTLKPSYQKEADSFGALRVPTELGAIYIAVPCLLLA 111
            MFGF +L       K A GVS+K+L+LY +VF  RL S+++HEGYLPYD+SGD++YH  E+++L+   + +   +   K +YQ +AD FG + VP+ LGA+Y+AVP LL+A
Sbjct:  131 MFGFGILNVKTFTSKRATGVSIKTLQLYSMVFFFRLTSIIRHEGYLPYDKSGDWLYHVIEIMALIFTSSALYGCMFPFKSTYQADADKFGEINVPSGLGAVYLAVPVLLVA 241          
BLAST of mRNA_H-elongata_contig98472.17195.1 vs. uniprot
Match: A0A1E7FBS6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBS6_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.220e-25
Identity = 55/112 (49.11%), Postives = 76/112 (67.86%), Query Frame = 0
Query:    2 FGFAVLLGLMLVKKHARGVSLKSLELYVVVFASRLVSVMQHEGYLPYDRSGDFVYHAAELISLVVALACVALMLTTLKPSYQKEADSFGALRVPTELGAIYIAVPCLLLAVV 113
            FGF +L       + A GVS+K+L+LYV+VF  RL S+++HEGYLPYD+SGD++YH  E +SLV+A   +   +   K +YQ E D FG L VP   GA+Y+A P LLLA++
Sbjct:  147 FGFGILNLKTFKSQRATGVSIKTLQLYVIVFFFRLTSIIRHEGYLPYDKSGDWLYHFVEGMSLVLASLALYACMVPFKHTYQAELDKFGELLVPPGTGAVYLAAPILLLAII 258          
BLAST of mRNA_H-elongata_contig98472.17195.1 vs. uniprot
Match: A0A7S2MBH8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MBH8_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.920e-25
Identity = 51/111 (45.95%), Postives = 77/111 (69.37%), Query Frame = 0
Query:    1 MFGFAVLLGLMLVKKHARGVSLKSLELYVVVFASRLVSVMQHEGYLPYDRSGDFVYHAAELISLVVALACVALMLTTLKPSYQKEADSFGALRVPTELGAIYIAVPCLLLA 111
            MFGF +L   + + K A GVS+KSL+LY +VF  RL S+++HEGYLPYD+SGD++YH  E  SL++++  +   L   K +YQ + D FG + VP   GA+Y+A+P ++L+
Sbjct:  139 MFGFGILNAKIFMSKRATGVSVKSLQLYTLVFFFRLTSIIRHEGYLPYDKSGDWLYHIIEGTSLMLSITAMYGCLVLFKHTYQPDQDKFGEMNVPPGYGAVYLAIPVMILS 249          
BLAST of mRNA_H-elongata_contig98472.17195.1 vs. uniprot
Match: A0A7S2GHT0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHT0_9STRA)

HSP 1 Score: 105 bits (261), Expect = 4.080e-25
Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = 0
Query:    2 FGFAVLLGLMLVKKHARGVSLKSLELYVVVFASRLVSVMQHEGYLPYDRSGDFVYHAAELISLVVALACVALMLTTLKPSYQKEADSFGALRVPTELGAIYIAVPCLLLAVV 113
            F F +L   M     A  VSLK+LE Y+VVF  RLVS+M+HEGYLPYD SGD+ YH  E  SLV A   V  +    + +Y    D+FG L +P+ LG +YI +PCL+LAV+
Sbjct:   53 FAFIILNIKMFTSNSASSVSLKTLEAYIVVFFWRLVSIMRHEGYLPYDSSGDWFYHVVEFTSLVSACVAVYQLFYKYRGTYDDSKDAFGNLGIPSFLGVLYIVLPCLILAVI 164          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98472.17195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX19_ECTSI6.950e-5073.68Er lumen protein retaining receptor 1 n=2 Tax=Ecto... [more]
A0A836CR66_9STRA1.550e-3756.76Er lumen protein retaining receptor 1 n=1 Tax=Trib... [more]
A0A835ZJ22_9STRA8.650e-3758.56Er lumen protein retaining receptor 1 n=1 Tax=Trib... [more]
A0A812YBP6_SYMMI1.370e-2644.64KdelR protein n=1 Tax=Symbiodinium microadriaticum... [more]
B8C3M7_THAPS2.260e-2647.32Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2UQ71_9STRA2.330e-2650.45Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2H0H3_9STRA3.550e-2647.75Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1E7FBS6_9STRA1.220e-2549.11Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A7S2MBH8_9STRA2.920e-2545.95Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2GHT0_9STRA4.080e-2549.11Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000133ER lumen protein retaining receptorPFAMPF00810ER_lumen_receptcoord: 17..113
e-value: 1.7E-12
score: 48.4
IPR000133ER lumen protein retaining receptorPANTHERPTHR10585ER LUMEN PROTEIN RETAINING RECEPTORcoord: 1..112
NoneNo IPR availablePANTHERPTHR10585:SF62coord: 1..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..78
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..89
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..116
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.591
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 91..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98472contigH-elongata_contig98472:299..2090 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98472.17195.1mRNA_H-elongata_contig98472.17195.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98472 275..2090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98472.17195.1 ID=prot_H-elongata_contig98472.17195.1|Name=mRNA_H-elongata_contig98472.17195.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp
MFGFAVLLGLMLVKKHARGVSLKSLELYVVVFASRLVSVMQHEGYLPYDR
SGDFVYHAAELISLVVALACVALMLTTLKPSYQKEADSFGALRVPTELGA
IYIAVPCLLLAVVRET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000133ER_ret_rcpt