prot_H-elongata_contig9830.17178.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9830.17178.1
Unique Nameprot_H-elongata_contig9830.17178.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length391
Homology
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BLAST of mRNA_H-elongata_contig9830.17178.1 vs. uniprot
Match: D8LQ12_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ12_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 1.670e-80
Identity = 247/410 (60.24%), Postives = 292/410 (71.22%), Query Frame = 0 
Query:    2 DPRARMISGFGLLSIDERGESIMGKGKTSIASDMTGELTPR-SACGDAATERDYEPVSEEGELTRTLSALQRLSAEERTTLKRKLREQQQSCREP---------------------ADQEKSSNEDVAPIAT--DSPYRVVLQKAVVEGDVEAASVALLSGADPNERDDLRHSSLHFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASTQAGDRGTFRRIAELLGPSALLARDELEQTPLHVASSCGNRAAVAVLLELNADPEAIDRKGRVAGQSFLRQVSKRARAEIREKLAAAIERRNSS-VGASSCDVEP-----PPPSRLMKRVGSMSSCEEAAPIRRPTLPAMLNLLSGFG------GDGRGGGETSF 375
            + R RMISG+G+L+I++   +        IA+++TGE+TP  SAC     E D E     GELTRTLSALQRLS E++TTL+RKL  Q                              +E    + +A +    DSP+RVVLQKAVVE D++AA  AL SGADPNERDDL HSSLHFAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASTQA ++ TFR++AELLGPSALLARDEL+QTPLHVA+SCGNR AV+VLLELNADPEA DRKGRVAGQSFLRQV++RARA+IR  LAAA+ER ++    A   D++      PP    MKR  S +SCE A P+R+P++ ++L  + G+G        GRGGGETSF
Sbjct:    7 EARQRMISGYGMLAIEDPAPAATKAAGEPIATELTGEITPSGSAC---EGEEDSE-----GELTRTLSALQRLSVEDQTTLRRKLGAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKEGKGEQGMAALGVPADSPFRVVLQKAVVESDLDAARAALRSGADPNERDDLCHSSLHFAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASTQACEKDTFRQMAELLGPSALLARDELQQTPLHVAASCGNRGAVSVLLELNADPEATDRKGRVAGQSFLRQVTRRARADIRASLAAAVERIHAPPADAEDDDLDADGGGLPPMPGGMKRATSTASCESAEPVRKPSMLSLLQ-IGGWGXXXXXDASGRGGGETSF 407
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9830.17178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ12_ECTSI1.670e-8060.24Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ12... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 249..278
e-value: 0.13
score: 21.3
coord: 147..176
e-value: 4.5
score: 16.2
coord: 114..143
e-value: 1000.0
score: 4.9
coord: 180..210
e-value: 0.035
score: 23.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 249..281
score: 10.526
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 147..179
score: 9.591
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 180..212
score: 11.755
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 73..228
e-value: 2.0E-28
score: 100.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 241..309
e-value: 2.1E-8
score: 35.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 111..286
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 120..208
e-value: 7.7E-10
score: 39.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 119..281
score: 34.456
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 115..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9830contigH-elongata_contig9830:2768..7481 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9830.17178.1mRNA_H-elongata_contig9830.17178.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9830 2491..8054 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9830.17178.1 ID=prot_H-elongata_contig9830.17178.1|Name=mRNA_H-elongata_contig9830.17178.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=391bp
MDPRARMISGFGLLSIDERGESIMGKGKTSIASDMTGELTPRSACGDAAT
ERDYEPVSEEGELTRTLSALQRLSAEERTTLKRKLREQQQSCREPADQEK
SSNEDVAPIATDSPYRVVLQKAVVEGDVEAASVALLSGADPNERDDLRHS
SLHFAAAKGDIGCLQELMGSGARANVANNAGWSPLHYAVLGGHVSAVESL
LRAGAYPCFRDNHLISPLHLASTQAGDRGTFRRIAELLGPSALLARDELE
QTPLHVASSCGNRAAVAVLLELNADPEAIDRKGRVAGQSFLRQVSKRARA
EIREKLAAAIERRNSSVGASSCDVEPPPPSRLMKRVGSMSSCEEAAPIRR
PTLPAMLNLLSGFGGDGRGGGETSFGTRLASANRYSKQSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom