prot_H-elongata_contig98210.17172.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98210.17172.1
Unique Nameprot_H-elongata_contig98210.17172.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length75
Homology
BLAST of mRNA_H-elongata_contig98210.17172.1 vs. uniprot
Match: A0A6H5JSR8_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR8_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.660e-29
Identity = 55/78 (70.51%), Postives = 62/78 (79.49%), Query Frame = 0
Query:    1 GGVLGAVAPVGPNTHVQEAIHKEVQYSREGKMP---PGKTLQVFQFVKKTFVVPDDFEKDHKYGPLSGVSHELRVVSA 75
            G V GA AP   N+HVQEAIHKEVQYSREG      P  TL VF+FVK+ FV+P++FEKDHK+GPLSGVSHELRVVSA
Sbjct:   61 GVVAGATAPKPSNSHVQEAIHKEVQYSREGNSKGNVPANTLAVFRFVKEAFVIPNNFEKDHKFGPLSGVSHELRVVSA 138          
BLAST of mRNA_H-elongata_contig98210.17172.1 vs. uniprot
Match: D7G087_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G087_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 9.190e-17
Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 GGVLGAVAPVGP-NTHVQEAIHKEVQYSREGKMP---PGKTLQVFQFVKKTFVVPDDFEKDHK 59
            G V GA AP    N+HVQEAIHKEVQYSREGK     P  TL VF+FVK+ FV+P++FEKDHK
Sbjct:   61 GVVAGATAPKSSSNSHVQEAIHKEVQYSREGKSKGNVPANTLAVFRFVKEAFVIPNNFEKDHK 123          
BLAST of mRNA_H-elongata_contig98210.17172.1 vs. uniprot
Match: A0A8K1FH55_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH55_PYTOL)

HSP 1 Score: 53.9 bits (128), Expect = 4.150e-7
Identity = 24/63 (38.10%), Postives = 41/63 (65.08%), Query Frame = 0
Query:   15 HVQEAIHKEVQYSREGKMP--PGKTLQVFQFVKKTFVVPDDFEKDHKYGPLSGVSHELRVVSA 75
            HV   I   V+Y R G+    P  T ++  ++++ +V+P DFE++HKYGP SG+++E R++ A
Sbjct:   67 HVPRFIFNTVKYVRRGEAHEVPMTTQKIVDYIREHYVIPIDFEQNHKYGPHSGMTYEERLLRA 129          
BLAST of mRNA_H-elongata_contig98210.17172.1 vs. uniprot
Match: A0A7R9U4S1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4S1_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 2.930e-6
Identity = 24/62 (38.71%), Postives = 38/62 (61.29%), Query Frame = 0
Query:   15 HVQEAIHKEVQYSREGKMPPGKT-LQVFQFVKKTFVVPDDFEKDHKYGPLSGVSHELRVVSA 75
            +V   ++  ++Y R G      T +  F+ V+  + +P DFEKD KYGP+SG+S E RV++A
Sbjct:   67 YVPVHLYANLEYRRRGDKELSATEIAAFELVETHYEIPKDFEKDSKYGPISGLSFEERVLAA 128          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98210.17172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JSR8_9PHAE3.660e-2970.51CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G087_ECTSI9.190e-1765.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8K1FH55_PYTOL4.150e-738.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7R9U4S1_9STRA2.930e-638.71Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98210contigH-elongata_contig98210:61..995 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98210.17172.1mRNA_H-elongata_contig98210.17172.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98210 61..995 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98210.17172.1 ID=prot_H-elongata_contig98210.17172.1|Name=mRNA_H-elongata_contig98210.17172.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp
GGVLGAVAPVGPNTHVQEAIHKEVQYSREGKMPPGKTLQVFQFVKKTFVV
PDDFEKDHKYGPLSGVSHELRVVSA
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