prot_H-elongata_contig9821.17171.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9821.17171.1
Unique Nameprot_H-elongata_contig9821.17171.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length59
Homology
BLAST of mRNA_H-elongata_contig9821.17171.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 3.960e-8
Identity = 33/66 (50.00%), Postives = 38/66 (57.58%), Query Frame = 0
Query:    1 YGLHQLFLTERALYVLVWNASRFTGKLVELVDHLDE--------WLVTLYLRAPHSTVLLCGTHKD 58
            YG+HQ FLT RALY+LVW+  R  GK     D LDE        WL  L+LRAP STV+L     D
Sbjct:  287 YGMHQNFLTRRALYLLVWDVLRCHGK---TDDDLDEVIFQDIMRWLYVLHLRAPGSTVILVANKCD 349          
BLAST of mRNA_H-elongata_contig9821.17171.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 7.410e-8
Identity = 30/63 (47.62%), Postives = 37/63 (58.73%), Query Frame = 0
Query:    1 YGLHQLFLTERALYVLVWNASRFTGKLVELVDH-----LDEWLVTLYLRAPHSTVLLCGTHKD 58
            YG+HQ FLT RALY+LVW+ SR  GK    +D      + +WL  L+LR P S VLL     D
Sbjct:  449 YGMHQTFLTRRALYLLVWDVSRCHGKESNDLDKVVSEDIMKWLYALHLRVPGSAVLLVANKCD 511          
BLAST of mRNA_H-elongata_contig9821.17171.1 vs. uniprot
Match: UPI00096AF9BA (leucine-rich repeat serine/threonine-protein kinase 1-like n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096AF9BA)

HSP 1 Score: 55.1 bits (131), Expect = 2.570e-7
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    1 YGLHQLFLTERALYVLVWNASRFTGKLVELVDHLDEWLVTLYLRAPHSTVLLCGTHKD 58
            Y  HQ FL+ER++Y+L+WN     G+  E +  L  WL  + LRAP S VL+ GTH D
Sbjct:  557 YATHQCFLSERSMYLLLWNVQH--GE--EGIQELKPWLDNIALRAPRSCVLIVGTHLD 610          
BLAST of mRNA_H-elongata_contig9821.17171.1 vs. uniprot
Match: A0A1X7UX36_AMPQE (Non-specific serine/threonine protein kinase n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UX36_AMPQE)

HSP 1 Score: 55.1 bits (131), Expect = 2.590e-7
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    1 YGLHQLFLTERALYVLVWNASRFTGKLVELVDHLDEWLVTLYLRAPHSTVLLCGTHKD 58
            Y  HQ FL+ER++Y+L+WN     G+  E +  L  WL  + LRAP S VL+ GTH D
Sbjct:  557 YATHQCFLSERSMYLLLWNVQH--GE--EGIQELKPWLDNIALRAPRSCVLIVGTHLD 610          
BLAST of mRNA_H-elongata_contig9821.17171.1 vs. uniprot
Match: A0A1X7UGT6_AMPQE (Non-specific serine/threonine protein kinase n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UGT6_AMPQE)

HSP 1 Score: 55.1 bits (131), Expect = 2.600e-7
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    1 YGLHQLFLTERALYVLVWNASRFTGKLVELVDHLDEWLVTLYLRAPHSTVLLCGTHKD 58
            Y  HQ FL+ER++Y+L+WN     G+  E +  L  WL  + LRAP S VL+ GTH D
Sbjct:  533 YATHQCFLSERSMYLLLWNVQH--GE--EGIQELKPWLDAIALRAPRSCVLIVGTHLD 586          
BLAST of mRNA_H-elongata_contig9821.17171.1 vs. uniprot
Match: UPI001402005A (leucine-rich repeat serine/threonine-protein kinase 2 isoform X1 n=4 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001402005A)

HSP 1 Score: 53.9 bits (128), Expect = 6.680e-7
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0
Query:    1 YGLHQLFLTERALYVLVWNASRFTGKLVELVDHLDEWLVTLYLRAPHSTVLLCGTHKDK 59
            Y  H  F+++RALYVLV++ASR   +    V  L  WL+ + +RAP   V+L GTH+DK
Sbjct: 1368 YSTHPCFMSQRALYVLVYDASRGPNE----VASLRPWLMNIKVRAPLCPVILVGTHEDK 1422          
BLAST of mRNA_H-elongata_contig9821.17171.1 vs. uniprot
Match: A0A6M4RTI5_PETMA (Non-specific serine/threonine protein kinase n=1 Tax=Petromyzon marinus TaxID=7757 RepID=A0A6M4RTI5_PETMA)

HSP 1 Score: 53.5 bits (127), Expect = 9.100e-7
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0
Query:    1 YGLHQLFLTERALYVLVWNASRFTGKLVELVDHLDEWLVTLYLRAPHSTVLLCGTHKDK 59
            Y  H  F+++RALYVLV++ASR   +    V  L  WL+ + +RAP   V+L GTH+DK
Sbjct:  853 YSTHPCFMSQRALYVLVYDASRGPDE----VASLRPWLMNIKVRAPLCPVILVGTHEDK 907          
BLAST of mRNA_H-elongata_contig9821.17171.1 vs. uniprot
Match: A0A8B7DGY2_HYDVU (leucine-rich repeat serine/threonine-protein kinase 2-like n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B7DGY2_HYDVU)

HSP 1 Score: 53.5 bits (127), Expect = 9.110e-7
Identity = 26/59 (44.07%), Postives = 38/59 (64.41%), Query Frame = 0
Query:    1 YGLHQLFLTERALYVLVWNASRFTGKLVELVDHLDEWLVTLYLRAPHSTVLLCGTHKDK 59
            Y  H+ FL+ RALY+ V+NAS+   +L +L      WL+ + + AP+S V+L GTH DK
Sbjct:  528 YSTHRYFLSSRALYLAVYNASKGEEELKKLTP----WLLNIQIVAPYSKVILVGTHADK 582          
BLAST of mRNA_H-elongata_contig9821.17171.1 vs. uniprot
Match: UPI001EE58317 (leucine-rich repeat serine/threonine-protein kinase 2-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE58317)

HSP 1 Score: 53.5 bits (127), Expect = 9.120e-7
Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 0
Query:    1 YGLHQLFLTERALYVLVWNASRFTGKLVELVDHLDEWLVTLYLRAPHSTVLLCGTHKDK 59
            Y  HQ FL+ RALY++V++ S    K +E +D L  WL  ++ RAP   V++ GTH DK
Sbjct:  704 YSTHQCFLSNRALYLVVYDVS----KGLEEIDRLKPWLSNIHFRAPGCPVIVVGTHFDK 758          
BLAST of mRNA_H-elongata_contig9821.17171.1 vs. uniprot
Match: A0A2R2MNR6_LINUN (leucine-rich repeat serine/threonine-protein kinase 2-like isoform X1 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A2R2MNR6_LINUN)

HSP 1 Score: 53.5 bits (127), Expect = 9.120e-7
Identity = 25/58 (43.10%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    1 YGLHQLFLTERALYVLVWNASRFTGKLVELVDHLDEWLVTLYLRAPHSTVLLCGTHKD 58
            Y  HQ FL+ R+LY++V+N      +    V+ L  WL+ +  RAPHS V++ GTHKD
Sbjct:  809 YNTHQCFLSNRSLYLVVYNLQIGPSE----VETLRPWLLNIKARAPHSPVIIVGTHKD 862          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9821.17171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JW02_9PHAE3.960e-850.00Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FVX5_ECTSI7.410e-847.62LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
UPI00096AF9BA2.570e-746.55leucine-rich repeat serine/threonine-protein kinas... [more]
A0A1X7UX36_AMPQE2.590e-746.55Non-specific serine/threonine protein kinase n=1 T... [more]
A0A1X7UGT6_AMPQE2.600e-746.55Non-specific serine/threonine protein kinase n=2 T... [more]
UPI001402005A6.680e-745.76leucine-rich repeat serine/threonine-protein kinas... [more]
A0A6M4RTI5_PETMA9.100e-745.76Non-specific serine/threonine protein kinase n=1 T... [more]
A0A8B7DGY2_HYDVU9.110e-744.07leucine-rich repeat serine/threonine-protein kinas... [more]
UPI001EE583179.120e-744.07leucine-rich repeat serine/threonine-protein kinas... [more]
A0A2R2MNR6_LINUN9.120e-743.10leucine-rich repeat serine/threonine-protein kinas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 3..58
e-value: 3.0E-10
score: 42.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9821contigH-elongata_contig9821:3496..9375 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9821.17171.1mRNA_H-elongata_contig9821.17171.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9821 3496..9377 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9821.17171.1 ID=prot_H-elongata_contig9821.17171.1|Name=mRNA_H-elongata_contig9821.17171.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=59bp
YGLHQLFLTERALYVLVWNASRFTGKLVELVDHLDEWLVTLYLRAPHSTV
LLCGTHKDK
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