prot_H-elongata_contig9817.17167.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9817.17167.1
Unique Nameprot_H-elongata_contig9817.17167.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length206
Homology
BLAST of mRNA_H-elongata_contig9817.17167.1 vs. uniprot
Match: A0A6H5L132_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L132_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.000e-36
Identity = 92/203 (45.32%), Postives = 115/203 (56.65%), Query Frame = 0
Query:   11 RVGNLVERDIDGTWFPAKVLVVREEHCEEREPRG-------YRQQLYDLKYLDDNNCESEVPGNEVRPVFKETTR-KDPVRMHDAKVEGVAAESDGEYRRNSTTETKYRAADDEKVGQRPNPKCGADGTGPNPSDPSVSIFGFLASFKSQGDPGIVGPKVTIHSSRGTFDVEEDGTAMAYIINGPETNVAAGSGLRGIRWLKG 205
            RVG +VERDIDG WFPAKV+ V E+  +E  P G        RQ  YDL YLDDNN ESEVP  ++R V+   T+ K+ + +    + G   E  G+    +     +   D + +  R   + GA+      S       G       +   G  GPKVTIHSS GTFD +EDG+A AYIINGPETNVAAGSGLRGIRWL+G
Sbjct:   26 RVGEVVERDIDGVWFPAKVVAVHEKK-DEAVPSGGSGSIGRRRQLAYDLFYLDDNNRESEVPEEDIRVVYDYGTKTKESMLL----LLGTEHERGGDS--TAARGHSHGGGDSKSLDARQYVEAGAN------SRSRGQDGGKDGGVHDEDGDGHAGPKVTIHSSLGTFDTKEDGSATAYIINGPETNVAAGSGLRGIRWLRG 215          
BLAST of mRNA_H-elongata_contig9817.17167.1 vs. uniprot
Match: D8LHB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB0_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 5.350e-28
Identity = 81/201 (40.30%), Postives = 91/201 (45.27%), Query Frame = 0
Query:   11 RVGNLVERDIDGTWFPAKVLVVREEHCEEREPR-----GYRQQL-YDLKYLDDNNCESEVPGNEVRPVFKETTRKDPVRMHDAKVEGVAAESDGEYRRNSTTETKYRAADDEKVGQRPNPKCGADGTGPNPSDPSVSIFGFLASFKSQGDPGIVGPKVTIHSSRGTFDVEEDGTAMAYIINGPETNVAAGSGLRGIRWLKG 205
            RVG +VERDIDG WFPA+V+ V E+  E          G   QL YDL YLDDNN ESE  G +               +HD                                                                 +GD G  GPKVTIHSSRGTFD +EDG+A AYIINGPETNVAAGSGLRGIRWL+G
Sbjct:   21 RVGEVVERDIDGVWFPAQVVGVHEKTYEAGRSGSSGSIGRPWQLAYDLVYLDDNNRESEGEGKDGG-------------VHD-----------------------------------------------------------------EGDDGHAGPKVTIHSSRGTFDTKEDGSASAYIINGPETNVAAGSGLRGIRWLRG 143          
BLAST of mRNA_H-elongata_contig9817.17167.1 vs. uniprot
Match: A0A6S9KAU9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KAU9_HETAK)

HSP 1 Score: 88.6 bits (218), Expect = 1.300e-18
Identity = 70/199 (35.18%), Postives = 97/199 (48.74%), Query Frame = 0
Query:   11 RVGNLVERDIDGTWFPAKVLVVREEHCEEREPRGYRQQLYDLKYLDDNNCESEVPGNEVRPVFKETTRKDPVRMHDAKVEGVAAESDGEYRRNSTTETKYRAADDEKVGQRPNPKCGADGTGPNPSDPSVSIFGFLASFKSQGDPGI-----VGPKVTIHSSRGTFDVEEDGTAMAYIINGPETNVAAGSGLRGIRWLK 204
            +VGN+VERDIDG W+ AK++ V ++  +E         +YD++Y+DD N E  VP +E+R    ET            +E   A++D E   NS  ++                K G     P P      + G L  F ++G+          P+V +H       + +DG A AYIINGPE NVA GSGLRGIRWLK
Sbjct:   20 QVGNVVERDIDGEWYAAKIVSVIQDEFDEI--------IYDVEYVDDGNVEHGVPEDELRTGDHET------------LEQALAKADDEG--NSDNQS----------------KAGRPREAPRP------LGGAL--FPTRGEEEEEKRRQAAPRVVVHG------LAQDGEATAYIINGPENNVATGSGLRGIRWLK 166          
BLAST of mRNA_H-elongata_contig9817.17167.1 vs. uniprot
Match: A0A8K1FRW7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRW7_PYTOL)

HSP 1 Score: 72.0 bits (175), Expect = 2.720e-12
Identity = 64/197 (32.49%), Postives = 83/197 (42.13%), Query Frame = 0
Query:    8 RDIRVGNLVERDIDGTWFPAKVLVVREEHCEEREPRGYRQQLYDLKYLDDNNCESEVPGNEVRPVFKETTRKDPVRMHDAKVEGVAAESDGEYRRNSTTETKYRAADDEKVGQRPNPKCGADGTGPNPSDPSVSIFGFLASFKSQGDPGIVGPKVTIHSSRGTFDVEEDGTAMAYIINGPETNVAAGSGLRGIRWLK 204
            R  RVG  VER++DG WFP  ++     HC +        + YD++Y +D NCE EVP  E+R +  E   KDP                 E  R  T  ++ +  D                           +   L    S  DP    P V +H  RG    E    A AYIING E N+AAG+GLRGIRWL+
Sbjct:   33 RKWRVGTRVERELDGLWFPGTIV-----HCHDGG------EAYDVEYDEDQNCEPEVPVEELR-LLDEQAIKDP----------------NEIPRPQTALSQQQQKD--------------------------LLRDSLLLQTSDYDPNKA-PTVVLHH-RG----ETHAAASAYIINGLENNIAAGNGLRGIRWLR 169          
BLAST of mRNA_H-elongata_contig9817.17167.1 vs. uniprot
Match: A0A835Z3A3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3A3_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.780e-8
Identity = 38/84 (45.24%), Postives = 46/84 (54.76%), Query Frame = 0
Query:  130 GTGPNPSDPSVSIFGFLA------SFKSQGDPGIVGPK--VTIHSSRGTFDVEEDGTAMAYIINGPETNVAAGSGLRGIRWLKG 205
            G    P  P V+I   L       S     D G   P+  VT H+S    D  +DG A AYIINGP+TN+AAGSGLR +RWL+G
Sbjct:  110 GDAARPQQPPVAIPSALLRSIEDLSVNGGADDGDAAPQPTVTYHTSA-AHDNRDDGQAGAYIINGPDTNIAAGSGLRALRWLRG 192          
BLAST of mRNA_H-elongata_contig9817.17167.1 vs. uniprot
Match: A0A7S1TVG1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVG1_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.420e-6
Identity = 27/60 (45.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:   12 VGNLVERDIDGTWFPAKVLVVREEHCEEREPRGYRQQLYDLKYLDDNNCESEVPGNEVRP 71
            VG +VER+IDG WFPA+++            RG   +L+D++YLDD N E++VP  E+RP
Sbjct:   35 VGAVVEREIDGLWFPARII------------RGTFGELFDVEYLDDGNVETDVPRAELRP 82          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9817.17167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L132_9PHAE1.000e-3645.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHB0_ECTSI5.350e-2840.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6S9KAU9_HETAK1.300e-1835.18Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8K1FRW7_PYTOL2.720e-1232.49Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A835Z3A3_9STRA2.780e-845.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1TVG1_9STRA1.420e-645.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9817contigH-elongata_contig9817:4402..5718 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9817.17167.1mRNA_H-elongata_contig9817.17167.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9817 4402..5718 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9817.17167.1 ID=prot_H-elongata_contig9817.17167.1|Name=mRNA_H-elongata_contig9817.17167.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=206bp
MPTGERQRDIRVGNLVERDIDGTWFPAKVLVVREEHCEEREPRGYRQQLY
DLKYLDDNNCESEVPGNEVRPVFKETTRKDPVRMHDAKVEGVAAESDGEY
RRNSTTETKYRAADDEKVGQRPNPKCGADGTGPNPSDPSVSIFGFLASFK
SQGDPGIVGPKVTIHSSRGTFDVEEDGTAMAYIINGPETNVAAGSGLRGI
RWLKG*
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