prot_H-elongata_contig9815.17165.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9815.17165.1
Unique Nameprot_H-elongata_contig9815.17165.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length185
Homology
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BLAST of mRNA_H-elongata_contig9815.17165.1 vs. uniprot
Match: D7FYV2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV2_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 4.190e-54
Identity = 129/208 (62.02%), Postives = 142/208 (68.27%), Query Frame = 0 
Query:    1 MGAFLLTYFTHNQQIAPSGATATDLGSGLGHGGGLLGVPLSPTAWGGXXXXXXXXXXX------RAAAAIRARATSAPKVRKRWCVLDAMRFTLFRTRNRNKVKDHVPLDPRTVALVTPPFIPLKKK------------------EDPTSERDAVALVCFNMPPEMGTLVIRAEHVGAQEVWVHALAARLTSKDHNARMAELYGGSNG 184
            MGAFLLTY+TH+Q +AP  + A D+G G G G   LG  LSPT  GGXXXXXXXXXXX      RAA AIRARA  APKVRKRWCVLDA R TLFRTR + +VK+ V LDP  VALVTPPF P  +                   ED T+ERDAVALV F  P E GTLVIRAE V AQ VWV ALAARLTS++H+ARMAELYGG  G
Sbjct: 4645 MGAFLLTYYTHSQHVAPQSSAAVDMGYGFGQG--SLGGALSPT--GGXXXXXXXXXXXXXXXISRAAMAIRARANGAPKVRKRWCVLDATRLTLFRTRTKTRVKESVQLDPSRVALVTPPFTPWGRAGGGVXXXXXXXXXXXXXGEDVTNERDAVALVVFRNPTETGTLVIRAESVEAQHVWVRALAARLTSREHHARMAELYGGGAG 4848
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BLAST of mRNA_H-elongata_contig9815.17165.1 vs. uniprot
Match: A0A836CI77_9STRA (DENN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI77_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.360e-17
Identity = 52/117 (44.44%), Postives = 74/117 (63.25%), Query Frame = 0 
Query:   73 KVRKRWCVLDAMRFTLFRTRNRNKVKDHVPLDPRTVALVTPPFIPLKKKEDPTSERDAVALVCFNM----PPEM--GTLVIRAEHVGAQEVWVHALAARLTSKDHNARMAELYGGSN 183
            KV++RWC+LDA + + +R+R++ +VK ++P +P +V+LVTPPF         T+E D VALV +N     P E   GTLVIRAE +    + V AL A+LT ++H   M  LYG SN
Sbjct: 4017 KVKRRWCILDATKLSYYRSRSKTRVKGYIPFEPASVSLVTPPFA--VHSGHATTEHDCVALV-WNQEAAAPGESVPGTLVIRAEDMTTHRMLVRALKAKLTPREHLTMMRSLYGDSN 4130
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9815.17165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYV2_ECTSI4.190e-5462.02PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A836CI77_9STRA1.360e-1744.44DENN domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 64..172
e-value: 9.4E-7
score: 30.7
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 74..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9815contigH-elongata_contig9815:6069..7096 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9815.17165.1mRNA_H-elongata_contig9815.17165.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9815 6051..8328 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9815.17165.1 ID=prot_H-elongata_contig9815.17165.1|Name=mRNA_H-elongata_contig9815.17165.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=185bp
MGAFLLTYFTHNQQIAPSGATATDLGSGLGHGGGLLGVPLSPTAWGGGGG
GGGGGGISRAAAAIRARATSAPKVRKRWCVLDAMRFTLFRTRNRNKVKDH
VPLDPRTVALVTPPFIPLKKKEDPTSERDAVALVCFNMPPEMGTLVIRAE
HVGAQEVWVHALAARLTSKDHNARMAELYGGSNG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH-like_dom_sf