prot_H-elongata_contig98072.17155.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig98072.17155.1
Unique Nameprot_H-elongata_contig98072.17155.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length66
Homology
BLAST of mRNA_H-elongata_contig98072.17155.1 vs. uniprot
Match: D7G6G8_ECTSI (Dynein 18 kDa light chain, flagellar outer arm n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6G8_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 2.790e-28
Identity = 53/63 (84.13%), Postives = 60/63 (95.24%), Query Frame = 0
Query:    1 MSLSQEEIDACHEAFREVDISKRGHIDVWELRVVLQAELGQNPTDKEFFEVVSTVDREMRGII 63
            MSLSQEEIDAC EAFREVD+ +RG+I+VWELR+VLQ ELGQNPTDKEFFEVVSTVDREM+G+I
Sbjct:    1 MSLSQEEIDACQEAFREVDVGRRGNINVWELRIVLQ-ELGQNPTDKEFFEVVSTVDREMKGLI 62          
BLAST of mRNA_H-elongata_contig98072.17155.1 vs. uniprot
Match: A0A7S2SNW2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNW2_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.830e-12
Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 0
Query:    3 LSQEEIDACHEAFREVDISKRGHIDVWELRVVLQAELGQNPTDKEFFEVVSTVDREMRGII 63
            LSQEE++AC EAF   D +  G ID WELR +L+  LG++P+D+E FE++S VD  M G I
Sbjct:    2 LSQEEVEACREAFTAFDTNSSGEIDAWELRDILKG-LGRHPSDEELFEIISLVDTNMSGTI 61          
BLAST of mRNA_H-elongata_contig98072.17155.1 vs. uniprot
Match: A0A7S0I5U1_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I5U1_9EUKA)

HSP 1 Score: 65.1 bits (157), Expect = 2.000e-11
Identity = 33/63 (52.38%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    1 MSLSQEEIDACHEAFREVDISKRGHIDVWELRVVLQAELGQNPTDKEFFEVVSTVDREMRGII 63
            MSLS EEI+AC EAF   D    G ID WELR  LQ+ +GQ PTD+E F++++ VD +  G I
Sbjct:   32 MSLSNEEIEACREAFARFDKDNSGAIDAWELRATLQS-MGQEPTDEELFDMIAEVDSDGSGEI 93          
BLAST of mRNA_H-elongata_contig98072.17155.1 vs. uniprot
Match: A0A7S4IKA7_9EUKA (Hypothetical protein n=2 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4IKA7_9EUKA)

HSP 1 Score: 59.3 bits (142), Expect = 2.280e-9
Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 0
Query:    1 MSLSQEEIDACHEAFREVDISKRGHIDVWELRVVLQAELGQNPTDKEFFEVVSTVDREMRGII 63
            M LS EEI+AC +AF + D    G I  WELR +LQ+ +GQ+PTD+E F++++ VD +  G I
Sbjct:   13 MELSNEEIEACRDAFSKFDKDGSGAISDWELRAMLQS-MGQDPTDEELFDMIAEVDSDGSGEI 74          
BLAST of mRNA_H-elongata_contig98072.17155.1 vs. uniprot
Match: A0A8J6C455_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C455_DIALT)

HSP 1 Score: 56.6 bits (135), Expect = 2.090e-8
Identity = 29/62 (46.77%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    2 SLSQEEIDACHEAFREVDISKRGHIDVWELRVVLQAELGQNPTDKEFFEVVSTVDREMRGII 63
            +L+ EEI+AC EAF++ D    G ID +ELR  LQ+ +GQ PTD+E F++++ VD +  G I
Sbjct:    5 TLTNEEIEACREAFQKFDRDGSGAIDSFELRATLQS-MGQQPTDEELFDMIAEVDADGSGEI 65          
BLAST of mRNA_H-elongata_contig98072.17155.1 vs. uniprot
Match: B7GD06_PHATC (Calmodulin n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GD06_PHATC)

HSP 1 Score: 47.8 bits (112), Expect = 5.550e-5
Identity = 25/54 (46.30%), Postives = 39/54 (72.22%), Query Frame = 0
Query:    3 LSQEEIDACHEAFREVDISKRGHIDVWELRVVLQAELGQNPTDKEFFEVVSTVD 56
            L++E++    EAF   DI+  G I++ EL+ V+Q +LGQNPT+KE  E++S+VD
Sbjct:   11 LTEEQVADLKEAFAMFDINGDGTIEIHELQQVMQ-KLGQNPTEKELIEMISSVD 63          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig98072.17155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G6G8_ECTSI2.790e-2884.13Dynein 18 kDa light chain, flagellar outer arm n=2... [more]
A0A7S2SNW2_9STRA1.830e-1252.46Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0I5U1_9EUKA2.000e-1152.38Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S4IKA7_9EUKA2.280e-947.62Hypothetical protein n=2 Tax=Prymnesium polylepis ... [more]
A0A8J6C455_DIALT2.090e-846.77Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
B7GD06_PHATC5.550e-546.30Calmodulin n=2 Tax=Phaeodactylum tricornutum TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 1..63
e-value: 5.4E-11
score: 44.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 6..41
score: 8.823
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 3..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig98072contigH-elongata_contig98072:107..1120 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig98072.17155.1mRNA_H-elongata_contig98072.17155.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig98072 107..1120 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig98072.17155.1 ID=prot_H-elongata_contig98072.17155.1|Name=mRNA_H-elongata_contig98072.17155.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp
MSLSQEEIDACHEAFREVDISKRGHIDVWELRVVLQAELGQNPTDKEFFE
VVSTVDREMRGIIGQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair