prot_H-elongata_contig980.17152.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig980.17152.1
Unique Nameprot_H-elongata_contig980.17152.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length1236
Homology
BLAST of mRNA_H-elongata_contig980.17152.1 vs. uniprot
Match: D7FXT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT9_ECTSI)

HSP 1 Score: 441 bits (1133), Expect = 9.470e-132
Identity = 366/1104 (33.15%), Postives = 516/1104 (46.74%), Query Frame = 0
Query:  196 MAGRAVVEGVRNGRGVRFEAYVPESSQTYKLQLSVEDLKRLFANDPNKLAVGSKADMVRELVKMLYFDYTLEIEEA-ATPPDDDGMRLKPYHYRDREQWTCLAGRRKSDYDFHWESRATDKTLVARASPIGPLSSSMITTLAVSEKDTESN--ATISATLGDKVIANSLASN--TYGRAKRRRRFHRDVGSTTV----SHSDNECSTAMI--PDERAVWIRQRLAISNVQNLVVL------RAQDREHGVIKIESSAAGICAGAGSRVNLDG-NRPLFPSAKEDELRTGTGMYKYDFSTARKQRQGKPLEDHTSGRGGNMLTLYCSASLTDIFQGGKPRPMYMTKERRGVRADGKDKNNGGQ-SRVTAFQILIEEYYEAKRQAEARAEERLRARLAIKTRLRDLTLGTALRVSGVLLRLLVYEFPNQPGNLRVLFTDNRTMTTFRVTIGIGTIAASIAYQAITRAHHHMWAKAQRRRFIKRAICGGSRLIRTDNGGDGGGGPRHGYPSLRTEDATI---------ATRRTETPWMEEPFLNRMPQIFALRRQHLTVSLFLPPAGIYLRCLRRDSTAAWMPDLQTAARAIPPGIRLYHPRQPSMVDHRSLCRLRYQFTSAYMSIEVMTKASNDEGVKRISSDVVVRMGGLPNNANGTSTIEDVAPTMRNASASQSGKAPRPETLIPEPEH----IIFRCAP-PRRECGRGRRLCGGVANLQGQGGYFTFFRGNWAGSEGAFYLEWHNPSGFCCTGLGYVDAHTTFTLYLVAEDLERLTEYSGSMTAAENW----------------------------------------------RVSGNDYDALK-------KAPNEPGCYQPSTEEEAWEVIAREVICRCYWK---RFPSPENPRALSTATE--TSSIGLDQLCLEELIVSEVSRSLPMHTLSHEASQET--------SCHLRLAVTTCVFKGIMKVPGVGAPRCQPKHLLVVMSQWHSSLVIRCYDFLSGETKEATRPDSLADALLVETFKSMSKELRNMTLHVLLADLVVYDVV--GQEATPSKPHQNDESAHPIVMLDDGGACDYAKQVEADMLAAAKQVEKRREGLQM 1198
            MAGR VVEG    R +  EAY+P SS+T +L ++V++L+RLF ++P K+ VG K DMV ELVKMLYFDYTLE EEA +T P   G+R   YHY DRE WTCL  RR +D+D HWESR +   +    +  GP + +  T   + ++ +E+     +SA    +       S+  T G          D  S       S     CS A    PDERAVWI QRL + + QN++ +         D                 GA S   +   N P   +A   E                           T GR G    +    S T      K +      +  G RA+    N   + +RV AF + IEEY E +R AE   E +L+A LAIK R R LTLGT ++VSG LL L+VYEFP+QPGNL V+FT+  +  TFR+++GIG +AA   + ++  +    W   Q+R+ IK  I   S+L+  +        P    P     +  I         A      PW     L+   +  +  R      LF       +RCL RDSTAA+  +L TA+R      + +  +QP+  DHR    L    ++   S+ V   +        +S      M G P +++G     D   + +  + S+   A R   +          +  R  P  RRECGRG RLCGG+A + G  G ++  R NWAG+E  + LEW+ P+ F     G V+AHTTFTL L+ +DL  LTE S  + AAE W                                              RV      A +       KA N      P TE EAWE +ARE++ +CYW    +     +P  ++T  +   ++ G DQ  LEE I S+V+R+ P   ++  A  +         +  +RLAV TCVF+ ++KV G+G P   P +LLVV+SQWH +LV+RCYDF+ GE ++A R D   D+ L+  FK+M    R + L V+L DLVV+D    G +A   K  ++  +A   +++DD G   Y  QVE  M AAA Q   +REG Q+
Sbjct:    1 MAGRVVVEGAAYPRCLLIEAYIPASSETIQLYVAVDELERLFRDEPEKMWVGRKDDMVLELVKMLYFDYTLETEEADSTLPG--GIRFTSYHYSDREPWTCLHARRDADFDLHWESRNSGAGIGLPGA--GPTAGAAATPANIGDERSEATEGTCVSAQTKGRCSGEGSTSDACTSGPVHAHGTNPNDNNSIATAGPASRVAGACSAAAACTPDERAVWITQRLQVRDTQNMLDIDVAACGELSDGXXXXXXXXXXXXXXXXGAVSGHPIKSRNTPAAATAAMQEFVAXXXXXXXXXXXX----XXXXATAKTQGRSGRSTLVATVRSATSR----KWQTNRDAAQTCGPRANAARPNRAKRKTRVRAFDVRIEEYKEERRHAEEAKEAKLQAWLAIKKRFRGLTLGTVIQVSGRLLTLMVYEFPDQPGNLNVIFTNPPSGATFRLSLGIGAVAAQARHVSVASSPE-TWTLRQKRKVIKTVIQKNSKLVLVEEDETRDRVPESSRPRPSHSEEGIDNGEEVDAEALSMENDPWNG---LSVGGEGISKHRACGVRQLFCA-----IRCLGRDSTAAYAHELPTASRGFTRPRKAHQLQQPNPKDHRRAFSLVSSRSTHSASVGVAEPSVGVAAADHVSGSA---MQGNPASSHGVDGSAD--DSWKELTDSEGQGATRSRDVKGRAGTYGCVVRVRIRPRQRRECGRGHRLCGGIARVGGARGIYSLLRDNWAGAEDDYLLEWYAPNDFRPLRQGPVEAHTTFTLELLHQDLNLLTEGSDILAAAEEWSSKRDVTTTAFGGAHPTRDGAKKSTGATTATTALSDNGLVGRGEETRVLAPSSGAAQAEEHGEIKARNRDDVVPPLTESEAWERVAREILRKCYWGSNIQGGVARDPTTVATRPDYDQTTSGSDQPSLEECITSQVTRTPPSGLMAETAVGQPGRPLTGVDTADVRLAVGTCVFRRVIKVMGLGIP---PMYLLVVVSQWHDALVVRCYDFIGGEIRQAERLDRSRDSALISEFKNMEPREREIQLQVILDDLVVFDSTDAGTDAWSVKFREDGAAA---IIVDDAGKDLYDAQVEEQMAAAAAQ---KREGSQL 1069          
BLAST of mRNA_H-elongata_contig980.17152.1 vs. uniprot
Match: A0A6H5L4P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4P3_9PHAE)

HSP 1 Score: 421 bits (1082), Expect = 1.710e-125
Identity = 345/1032 (33.43%), Postives = 476/1032 (46.12%), Query Frame = 0
Query:  194 LGMAGRAVVEGVRNGRGVRFEAYVPESSQTYKLQLSVEDLKRLFANDPNKLAVGSKADMVRELVKMLYFDYTLEIEEA-ATPPDDDGMRLKPYHYRDREQWTCLAGRRKSDYDFHWESRAT---------DKTLVARASP--IGPLSSSMITTLAVSEKDT-----ESNATISATLGDKVIANSLASNTYGRAKRRRRFHRDVGSTTVSHSDNECSTAMIPDERAVWIRQRLAISNVQNLVVLRAQDREHGVIKIESSAAGICAGAGSRVNLDGNRPLFPSAKEDELRTGTGMYKYDFSTARKQRQGKPLEDHTSGRGGNMLTLYCSASLTDIFQGGKPRPMYMTKERRGVRADGKDKNNGGQ-SRVTAFQILIEEYYEAKRQAEARAEERLRARLAIKTRLRDLTLGTALRVSGVLLRLLVYEFPNQPGNLRVLFTDNRTMTTFRVTIGIGTIAASIAYQAITRAHHHMWAKAQRRRFIKRAICGGSRLIRTDNGGDGGGGPRHGYPSLRTEDATIATRRTETPWMEEPFLNRMPQIFALRRQHLTVSLFLPPAGIY-------------LRCLRRDSTAAWMPDLQTAARAIPPGIRLYHPRQPSMVDHRSLCRLRYQFTSAYMSIEVMTKASNDEGVKRISSDVVVRMGGLPNNANGTSTIEDVAPTMRNASASQSGKAPRPETLIPEPEHI-----IFRCAPPRRECGRGRRLCGGVANLQGQGGYFTFFRGNWAGSEGAFYLEWHNPSGFCCTGLGYVDAHTTFTLYLVAEDLERLTEYSGSMTAAENWR-------------------------------------VSGNDYDALK----------------KAPNEPGCYQPSTEEEAWEVIAREVICRCYWKRFPS---PENPRALSTATE--TSSIGLDQLCLEELIVSEVSRSLPMHTLSHEASQET--------SCHLRLAVTTCVFKGIMKVPGVGAPRCQPKHLLVVMSQWHSSLVIRCYDFLSGETKEATRPDSLADALLVETFKSMS 1123
            +GMAGR VVEG    R V  EAY+P SS+T +L +SV++L+RLF +D  KL VG K DMV ELVKMLYFDYTLE EEA +T PD  G+R   YHY DRE WTCL   R SD+D HWESR T         + T  A A+P  IG   S       VS +       E + + + T G  + A+  +SN            R  G+   +        A  P ERAVWI QRL + N QN+            + ++ +A G          L              +  GT           K R G      T GR G   TL  +       +    R    T   RG RA+    N   + +RV AF + IEEY E +R AE   E +L+A LA+K R R LTLGT ++VSG LL L+VYEFP+QPGNL V+FT   +  TFR+++GIG +AA   + ++  +    W   Q+R+ IK+ I   S+L+  +        P       R   A    R  ET   +        + F++        L +   GI              +RCL RDSTAA+   L TA+R        +  +QPS  DHR    L    +S      ++  A    GV          M G P +++G     D +   ++ +  +S  A R   +    E       +      RRECGRGRRLCGG+A ++G  G ++  RGNWAG+E  + L+W+ P+ F     G ++ HT FTL L+A+DL  LTE S    AAE W                                      + G   +  K                KA N  G   P TE EAWE +ARE++ +CYW          +P  ++T  +   ++ G DQ  LEE I S+ +R+ P   ++  A  +         +  +RL V TCVF+ ++KV G+G P   P +LLVV+SQWH +LV+RCYDF+ GE ++A R D   D+ L+  FK +S
Sbjct:    1 MGMAGRVVVEGAAYPRCVLIEAYIPASSETIQLYVSVDELERLFRDDSEKLWVGRKEDMVLELVKMLYFDYTLETEEADSTLPD--GIRFTSYHYSDREPWTCLHALRDSDFDLHWESRNTGAGPGFPGAEPTAGAAATPAKIGDEQSEGTEGTCVSAQTRGGYRGEGSPSDACTSGP-IHAHGTSSNDSKSIATAGPARRVAGACRAA-------AACTPAERAVWITQRLQVRNTQNM------------LDVDVAACG---------ELSDGXXXXXXXXXXSVAAGTVS-----GHPIKSRNGPGATAATQGRSGRS-TLDATVHSVASRKWHSKRDAAQT---RGHRANAAGPNRAKRKTRVRAFDVRIEEYKEERRHAEEAKEAKLQAWLAVKKRFRGLTLGTVIQVSGRLLTLMVYEFPDQPGNLNVVFTTPPSGATFRLSLGIGAVAAQARHVSVASSTD-TWTLRQKRKVIKKVIQNNSKLVLVEEDETRDRAPERRDNRFR---AFSDVRPFETSRRDYNGEEVDAEAFSMENDPWN-GLSVGGDGISKHRACGVRQVFCAIRCLGRDSTAAYARALPTASRGFTRPCNAHQLQQPSPKDHRRTFSL---MSSRSTHTALVGVAEPSVGVAVGDQVSGTAMQGNPASSHGVDGSADNS--WKDLTDDESEGATRSRDVTERAETYGCGVRVXXXXXXRRECGRGRRLCGGIARVRGARGIYSLLRGNWAGAEDDYLLDWYQPNDFRPLRQGPIETHTAFTLKLLAQDLNLLTEGSDVFPAAEEWSSKRDVATTTFGGAPPTRDGANNSTGATTATTALSDNGLVGRGEETRKLALSPGAAQAEEHGEPKARNRDGAVPPLTESEAWERVAREILRKCYWGSDVQGGVAGDPTIVATRPDYDQTTSGQDQPSLEECITSQATRTPPSGLMTETAMGQPGRPLAGVHTADVRLVVGTCVFRRVIKVMGLGIP---PMYLLVVVSQWHDALVVRCYDFIGGEIRQAERLDRSRDSALISEFKVIS 979          
BLAST of mRNA_H-elongata_contig980.17152.1 vs. uniprot
Match: D7FXT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT8_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 4.980e-28
Identity = 67/128 (52.34%), Postives = 84/128 (65.62%), Query Frame = 0
Query:    1 VGGTGLGLTVEAVGRFGVALDRSGRLRVVEKYMLAFDEVWPVDLPALRPLQLHLMRP-----------HICDDNR------------GPVYLMPMHRRGKGVEGREEELFWTPPALRRDRDESVLGRD 105
            V G  +GLT EA+ R  V LDRSGR+ +VEK++LAFDEVWP DLPALRPLQL+L R            H  ++ R            GPV+LMPMHR+GKGV+GRE+ELF  PP LRRD +E+ + R+
Sbjct:   59 VAGAVVGLTAEALARPAVVLDRSGRVILVEKHLLAFDEVWPADLPALRPLQLNLRRSCGAGRANGDVGHSDNNARKGEGQSGGGRFGGPVFLMPMHRKGKGVQGREDELFAEPPRLRRDEEETTMNRN 186          
BLAST of mRNA_H-elongata_contig980.17152.1 vs. uniprot
Match: A0A2R5GDM4_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GDM4_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.680e-14
Identity = 87/319 (27.27%), Postives = 142/319 (44.51%), Query Frame = 0
Query:    8 LTVEAVGRFGVALDRSGRLRVVEKYMLA----FDEVWPVDLPALRPLQLHLMRPHICDDNRGPVYLMPMHRRGKGVEGREEELFWTPPALRRDRDESVLGRDSRFSLASENWCGEKLRQGSRRANKDIDNGDVRGKRWSRCKLSSTGVELFWTAWSWVWSSEAKLMLGTLLLWRRSLYISRTHTVLSVFGLGMAGRAVVEGVRNGRGVRFEAYVPESSQTYKLQLSVEDLKRLFANDPNKLAVGSKADMVRELVKMLYFDYTLEIEEAATPPDDDGMRLKPYHYRDREQWTCLAGRRKSDYDFHWESRATDKTLVARAS 322
            L  + V R    LD  G++RV+++  +     FDE++      + PL+++LMR       R    +MP    G  ++  + +  +  P   RDR+      +    LA      +K R       K ++  +      S  K+ + GV                 +L  LLL R+   +     VLSV+G+G+AGR  ++  R  R VR EAY P + QTY L++++ DL+ LFA+ P+ L VG K  + R L+ M+Y D             ++ M+L     R  E+   L  RR+       E+RA ++T + R S
Sbjct:  101 LHADVVTRHCAVLDELGQVRVLQEARVELRERFDEIF------ISPLRMYLMRASDAYQERP---MMPCANNGFLLDNFDHKHGYREPIRNRDRN---WWEEMWTDLAPSLVPYKKRRAAEAAEAKALEEANTS----SNAKVYADGV-----------------LLSKLLLLRQGAVLGTQAMVLSVYGMGIAGRIYIKPARFPRHVRIEAYCPRTRQTYSLRVNLSDLEELFADRPHLLEVGHKKSLCRALLDMVYMD-------------EEVMQLCIARKRQPERRQVLQSRRQRR-----EARALEQTRLERIS 368          
BLAST of mRNA_H-elongata_contig980.17152.1 vs. uniprot
Match: A0A7S2EP25_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EP25_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 9.340e-7
Identity = 31/88 (35.23%), Postives = 53/88 (60.23%), Query Frame = 0
Query:  175 LWRRSLYISRTHTVLSVFGLGMAGRAVVEGVRNGRGVRFEAYVPESSQTYKLQLSVEDLKRLFANDPNKLAVGSKADMVRELVKMLYF 262
            +W+    IS  + ++SV G+G+AGR   EG +N R +  EAY  +S   +++ +++E +K LF++    L  G K +M+ EL  ML+F
Sbjct:   25 IWKGGSMISNAYCIISVIGVGIAGRVFAEGAQNPRSLLLEAYELDSCALHQVWVNMECIKDLFSDSLYYLKAGLKKEMIMELCTMLHF 112          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig980.17152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FXT9_ECTSI9.470e-13233.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4P3_9PHAE1.710e-12533.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXT8_ECTSI4.980e-2852.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2R5GDM4_9STRA3.680e-1427.27Uncharacterized protein n=1 Tax=Hondaea fermentalg... [more]
A0A7S2EP25_9STRA9.340e-735.23Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1199..1227
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 177..579
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 618..638
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 580..598
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 599..617
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 639..1236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig980contigH-elongata_contig980:6990..17154 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig980.17152.1mRNA_H-elongata_contig980.17152.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig980 6990..17154 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig980.17152.1 ID=prot_H-elongata_contig980.17152.1|Name=mRNA_H-elongata_contig980.17152.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1236bp
VGGTGLGLTVEAVGRFGVALDRSGRLRVVEKYMLAFDEVWPVDLPALRPL
QLHLMRPHICDDNRGPVYLMPMHRRGKGVEGREEELFWTPPALRRDRDES
VLGRDSRFSLASENWCGEKLRQGSRRANKDIDNGDVRGKRWSRCKLSSTG
VELFWTAWSWVWSSEAKLMLGTLLLWRRSLYISRTHTVLSVFGLGMAGRA
VVEGVRNGRGVRFEAYVPESSQTYKLQLSVEDLKRLFANDPNKLAVGSKA
DMVRELVKMLYFDYTLEIEEAATPPDDDGMRLKPYHYRDREQWTCLAGRR
KSDYDFHWESRATDKTLVARASPIGPLSSSMITTLAVSEKDTESNATISA
TLGDKVIANSLASNTYGRAKRRRRFHRDVGSTTVSHSDNECSTAMIPDER
AVWIRQRLAISNVQNLVVLRAQDREHGVIKIESSAAGICAGAGSRVNLDG
NRPLFPSAKEDELRTGTGMYKYDFSTARKQRQGKPLEDHTSGRGGNMLTL
YCSASLTDIFQGGKPRPMYMTKERRGVRADGKDKNNGGQSRVTAFQILIE
EYYEAKRQAEARAEERLRARLAIKTRLRDLTLGTALRVSGVLLRLLVYEF
PNQPGNLRVLFTDNRTMTTFRVTIGIGTIAASIAYQAITRAHHHMWAKAQ
RRRFIKRAICGGSRLIRTDNGGDGGGGPRHGYPSLRTEDATIATRRTETP
WMEEPFLNRMPQIFALRRQHLTVSLFLPPAGIYLRCLRRDSTAAWMPDLQ
TAARAIPPGIRLYHPRQPSMVDHRSLCRLRYQFTSAYMSIEVMTKASNDE
GVKRISSDVVVRMGGLPNNANGTSTIEDVAPTMRNASASQSGKAPRPETL
IPEPEHIIFRCAPPRRECGRGRRLCGGVANLQGQGGYFTFFRGNWAGSEG
AFYLEWHNPSGFCCTGLGYVDAHTTFTLYLVAEDLERLTEYSGSMTAAEN
WRVSGNDYDALKKAPNEPGCYQPSTEEEAWEVIAREVICRCYWKRFPSPE
NPRALSTATETSSIGLDQLCLEELIVSEVSRSLPMHTLSHEASQETSCHL
RLAVTTCVFKGIMKVPGVGAPRCQPKHLLVVMSQWHSSLVIRCYDFLSGE
TKEATRPDSLADALLVETFKSMSKELRNMTLHVLLADLVVYDVVGQEATP
SKPHQNDESAHPIVMLDDGGACDYAKQVEADMLAAAKQVEKRREGLQMIQ
EATREEEKHAREKREKREARRRELQAKSRKTHNNKK
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