prot_H-elongata_contig97966.17146.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig97966.17146.1
Unique Name	prot_H-elongata_contig97966.17146.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	141

Homology

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BLAST of mRNA_H-elongata_contig97966.17146.1 vs. uniprot
Match: D7FQU1_ECTSI (Intraflagellar transport particle protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQU1_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 2.010e-81
Identity = 129/141 (91.49%), Postives = 132/141 (93.62%), Query Frame = 0

Query:    1 ECVEAIYNLGLVNIHLGLPGDSLQAFEKLHTIIPNNTEVIYHIANLYEVSQGALSTGASKWFTILLARVPSDPGILSRMGHIANKEDDDSQAYFYHKESYRHYPVNLDVISWLGVWYVKSELYEKAIHYFETASQIQPTEV 141
            +CVEAIYNLGLVNIHLGLPGDSLQAFEKLHTIIPNNTEVIYHIANLYE     L   ASKWF ILLARVP+DPGILSRMGHIANKEDDDSQAYFYHKESYRHYPVNLDVISWLGVWYVKSELYEKAIHYFETA+QIQPTEV
Sbjct:  417 DCVEAIYNLGLVNIHLGLPGDSLQAFEKLHTIIPNNTEVIYHIANLYEAHMENLPQ-ASKWFNILLARVPTDPGILSRMGHIANKEDDDSQAYFYHKESYRHYPVNLDVISWLGVWYVKSELYEKAIHYFETAAQIQPTEV 556

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BLAST of mRNA_H-elongata_contig97966.17146.1 vs. uniprot
Match: A0A835Z9Y6_9STRA (Intraflagellar transport particle protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y6_9STRA)

HSP 1 Score: 211 bits (538), Expect = 4.070e-62
Identity = 100/141 (70.92%), Postives = 121/141 (85.82%), Query Frame = 0

Query:    1 ECVEAIYNLGLVNIHLGLPGDSLQAFEKLHTIIPNNTEVIYHIANLYEVSQGALSTGASKWFTILLARVPSDPGILSRMGHIANKEDDDSQAYFYHKESYRHYPVNLDVISWLGVWYVKSELYEKAIHYFETASQIQPTEV 141
            +CVEAI+NLGL NI LGL GD+LQAFEKLHT++P + EV+YHIANL+E  +  L+  A+KWF ILLARVP+DPG+L+RMG IAN+++D+SQAY YH ESYRHYP NLDVISWLGVWYVKSELYE+A+ +F  ASQIQP EV
Sbjct:  427 DCVEAIFNLGLANIQLGLVGDALQAFEKLHTVLPTSAEVVYHIANLHERGRDDLAA-AAKWFNILLARVPTDPGVLARMGQIANRQEDESQAYHYHLESYRHYPANLDVISWLGVWYVKSELYERAVAFFARASQIQPGEV 566

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BLAST of mRNA_H-elongata_contig97966.17146.1 vs. uniprot
Match: F0YAE8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAE8_AURAN)

HSP 1 Score: 196 bits (498), Expect = 5.160e-57
Identity = 96/141 (68.09%), Postives = 116/141 (82.27%), Query Frame = 0

Query:    1 ECVEAIYNLGLVNIHLGLPGDSLQAFEKLHTIIPNNTEVIYHIANLYEVSQGALSTGASKWFTILLARVPSDPGILSRMGHIANKEDDDSQAYFYHKESYRHYPVNLDVISWLGVWYVKSELYEKAIHYFETASQIQPTEV 141
            +CVEAIYNLGLVN+ + L  ++LQAFEKLH I+PNN EVIY I+ L+E ++G L   A KW+ IL+ RVPSDPG+L RMG I N+ DD+ QA+ +H ESYRHYPV+LDVISWLGVWYVKSE+YEKAIH+FE ASQIQP EV
Sbjct:  429 DCVEAIYNLGLVNLKMELWSEALQAFEKLHQIVPNNAEVIYQISALHE-ARGQLDI-ALKWYNILITRVPSDPGVLLRMGQICNRTDDEPQAFHFHLESYRHYPVSLDVISWLGVWYVKSEMYEKAIHFFERASQIQPKEV 567

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BLAST of mRNA_H-elongata_contig97966.17146.1 vs. uniprot
Match: A0A8J2S308_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S308_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.070e-55
Identity = 93/141 (65.96%), Postives = 117/141 (82.98%), Query Frame = 0

Query:    1 ECVEAIYNLGLVNIHLGLPGDSLQAFEKLHTIIPNNTEVIYHIANLYEVSQGALSTGASKWFTILLARVPSDPGILSRMGHIANKEDDDSQAYFYHKESYRHYPVNLDVISWLGVWYVKSELYEKAIHYFETASQIQPTEV 141
            +CVEAIY+LGLVN+ + L  ++LQAFEKLH ++PNN EVIY IA L+E +QG +   A KW+ IL+ RVPSDPG+L RMG + N+ DD++QA+ +H ESYRHYPV+LDVISWLGVWYVKSE+YEKAIH+FE A+QIQP EV
Sbjct:  495 DCVEAIYDLGLVNLKMELWAEALQAFEKLHQVVPNNAEVIYQIAALHE-AQGQVDV-ALKWYNILITRVPSDPGVLLRMGQLCNRNDDEAQAFHFHLESYRHYPVSLDVISWLGVWYVKSEMYEKAIHFFERAAQIQPKEV 633

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BLAST of mRNA_H-elongata_contig97966.17146.1 vs. uniprot
Match: A0A397DF83_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DF83_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.310e-55
Identity = 93/146 (63.70%), Postives = 119/146 (81.51%), Query Frame = 0

Query:    1 ECVEAIYNLGLVNIHLGLPGDSLQAFEKLHTIIPNNTEVIYHIANLYEVSQGALSTGASKWFTILL-----ARVPSDPGILSRMGHIANKEDDDSQAYFYHKESYRHYPVNLDVISWLGVWYVKSELYEKAIHYFETASQIQPTEV 141
            +C+EAI+NLGLVNI +G+  ++LQAFEKLH+I+P NTEV+Y IANL+++        A+KWF ILL     A+  +DPG+L+RMG I NK+DD++QA+ +H ESYRH+PVNLDVISWLGVWYVKSELYEKAI +FE A+QIQPTEV
Sbjct:  223 DCIEAIFNLGLVNIKIGVLNEALQAFEKLHSIVPTNTEVLYQIANLHDMMGNYRQ--AAKWFNILLSCFGSAKNIADPGVLARMGQIFNKDDDETQAFHFHLESYRHFPVNLDVISWLGVWYVKSELYEKAIQFFERAAQIQPTEV 366

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BLAST of mRNA_H-elongata_contig97966.17146.1 vs. uniprot
Match: A0A1V9YJV6_9STRA (Intraflagellar Transport Protein 88 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YJV6_9STRA)

HSP 1 Score: 188 bits (478), Expect = 3.000e-55
Identity = 93/146 (63.70%), Postives = 118/146 (80.82%), Query Frame = 0

Query:    1 ECVEAIYNLGLVNIHLGLPGDSLQAFEKLHTIIPNNTEVIYHIANLYEVSQGALSTGASKWFTILLARVPS-----DPGILSRMGHIANKEDDDSQAYFYHKESYRHYPVNLDVISWLGVWYVKSELYEKAIHYFETASQIQPTEV 141
            +C+EAI+NLGLVNI +G+  ++LQAFEKLH+I+P+NTEVI+ IANL+++        A+KWF ILL+   S     DPG+L+R+G I NK+DD++QA+ YH ESYRH+PVNLDVISWLGVWYVKSELYEKAI +FE ASQIQP EV
Sbjct:  138 DCIEAIFNLGLVNIKIGVLNEALQAFEKLHSIVPSNTEVIFQIANLHDMMGNYRQ--AAKWFNILLSCFGSSKNVADPGVLARLGQIFNKDDDETQAFHYHLESYRHFPVNLDVISWLGVWYVKSELYEKAIQFFERASQIQPQEV 281

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BLAST of mRNA_H-elongata_contig97966.17146.1 vs. uniprot
Match: A0A024UCQ4_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024UCQ4_9STRA)

HSP 1 Score: 192 bits (487), Expect = 2.800e-54
Identity = 94/146 (64.38%), Postives = 119/146 (81.51%), Query Frame = 0

Query:    1 ECVEAIYNLGLVNIHLGLPGDSLQAFEKLHTIIPNNTEVIYHIANLYEVSQGALSTGASKWFTILL-----ARVPSDPGILSRMGHIANKEDDDSQAYFYHKESYRHYPVNLDVISWLGVWYVKSELYEKAIHYFETASQIQPTEV 141
            +C+EAI+NLGLVNI +G+  ++LQAFEKLH+I+P NTEV+Y IANL+++        A+KWF ILL     A+  +DPG+L+RMG I NK+DD++QA+ YH ESYRH+PVNLDVISWLGVWYVKSELYEKAI +FE A+QIQPTEV
Sbjct:  528 DCIEAIFNLGLVNIKIGVLNEALQAFEKLHSIVPTNTEVLYQIANLHDMMGNYRQ--AAKWFNILLSCFGSAKNIADPGVLARMGQIFNKDDDETQAFHYHLESYRHFPVNLDVISWLGVWYVKSELYEKAIQFFERAAQIQPTEV 671

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BLAST of mRNA_H-elongata_contig97966.17146.1 vs. uniprot
Match: A0A485KY66_9STRA (Aste57867_13477 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KY66_9STRA)

HSP 1 Score: 191 bits (486), Expect = 4.730e-54
Identity = 94/146 (64.38%), Postives = 118/146 (80.82%), Query Frame = 0

Query:    1 ECVEAIYNLGLVNIHLGLPGDSLQAFEKLHTIIPNNTEVIYHIANLYEVSQGALSTGASKWFTILL-----ARVPSDPGILSRMGHIANKEDDDSQAYFYHKESYRHYPVNLDVISWLGVWYVKSELYEKAIHYFETASQIQPTEV 141
            +C+EAI+NLGLVNI +G+  ++LQAFEKLH+I+P NTEV+Y IANL+++        A+KWF ILL     A+  +DPG+L+RMG I NK+DD++QA+ YH ESYRH+PVNLDVISWLGVWYVKSELYEKAI +FE ASQIQP EV
Sbjct:  560 DCIEAIFNLGLVNIKIGVLNEALQAFEKLHSIVPTNTEVLYQIANLHDMMGNYRQ--AAKWFNILLSCFGSAKNVADPGVLARMGQIFNKDDDETQAFHYHLESYRHFPVNLDVISWLGVWYVKSELYEKAIQFFERASQIQPNEV 703

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BLAST of mRNA_H-elongata_contig97966.17146.1 vs. uniprot
Match: A0A6G0XD88_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XD88_9STRA)

HSP 1 Score: 191 bits (484), Expect = 7.910e-54
Identity = 94/146 (64.38%), Postives = 118/146 (80.82%), Query Frame = 0

Query:    1 ECVEAIYNLGLVNIHLGLPGDSLQAFEKLHTIIPNNTEVIYHIANLYEVSQGALSTGASKWFTILLARVPS-----DPGILSRMGHIANKEDDDSQAYFYHKESYRHYPVNLDVISWLGVWYVKSELYEKAIHYFETASQIQPTEV 141
            +C+EAI+NLGLVNI +G+  ++LQAFEKLH+I+P+NTEV+Y I NL+++        A+KWF ILL+   S     DPG+L+RMG I NK+DD++QA+ YH ESYRH+PVNLDVISWLGVWYVKSELYEKAI +FE ASQIQPTEV
Sbjct:  517 DCIEAIFNLGLVNIKIGVLNEALQAFEKLHSIVPSNTEVLYQIGNLHDMMGNYRH--AAKWFNILLSCFGSSKNVADPGVLARMGQIFNKDDDETQAFHYHLESYRHFPVNLDVISWLGVWYVKSELYEKAIQFFERASQIQPTEV 660

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BLAST of mRNA_H-elongata_contig97966.17146.1 vs. uniprot
Match: H3GSZ4_PHYRM (EGF-like domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSZ4_PHYRM)

HSP 1 Score: 187 bits (475), Expect = 2.580e-52
Identity = 92/153 (60.13%), Postives = 117/153 (76.47%), Query Frame = 0

Query:    1 ECVEAIYNLGLVNIHLGLPGDSLQAFEKLHTIIPNNTEVIYHIANLYEVSQGALSTGASKWFTILL------------ARVPSDPGILSRMGHIANKEDDDSQAYFYHKESYRHYPVNLDVISWLGVWYVKSELYEKAIHYFETASQIQPTEV 141
            +C+EAIYNLGLVNI +G+  ++LQAFEKLH+I+P N EV+Y IANL+++        A+KWF ILL            A+  +DPG+L+R+G I NK+DD++QA+ YH ESYRH+P+NLDVISWLGVWYVKSELYEKAI +FE ASQIQP EV
Sbjct: 1130 DCIEAIYNLGLVNIKMGVLNEALQAFEKLHSIVPTNAEVLYQIANLHDIMGNYRQ--AAKWFNILLSCFGGSDKRDRNAKNVADPGVLARIGQIFNKDDDETQAFHYHLESYRHFPINLDVISWLGVWYVKSELYEKAIQFFERASQIQPNEV 1280

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig97966.17146.1 vs. uniprot

BLAST of mRNA_H-elongata_contig97966.17146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQU1_ECTSI	2.010e-81	91.49	Intraflagellar transport particle protein n=2 Tax=...	[more]
A0A835Z9Y6_9STRA	4.070e-62	70.92	Intraflagellar transport particle protein n=1 Tax=...	[more]
F0YAE8_AURAN	5.160e-57	68.09	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]
A0A8J2S308_9STRA	1.070e-55	65.96	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A397DF83_9STRA	1.310e-55	63.70	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A1V9YJV6_9STRA	3.000e-55	63.70	Intraflagellar Transport Protein 88 (Fragment) n=1...	[more]
A0A024UCQ4_9STRA	2.800e-54	64.38	Uncharacterized protein n=5 Tax=Aphanomyces TaxID=...	[more]
A0A485KY66_9STRA	4.730e-54	64.38	Aste57867_13477 protein n=1 Tax=Aphanomyces stella...	[more]
A0A6G0XD88_9STRA	7.910e-54	64.38	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
H3GSZ4_PHYRM	2.580e-52	60.13	EGF-like domain-containing protein n=1 Tax=Phytoph...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 73..106 e-value: 82.0 score: 6.9 coord: 107..140 e-value: 63.0 score: 7.9 coord: 3..36 e-value: 1.0 score: 18.4
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 113..139 e-value: 0.058 score: 13.6
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 3..36 score: 7.434
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 107..140 score: 9.234
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 1..141 e-value: 2.6E-16 score: 61.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 3..139
None	No IPR available	PANTHER	PTHR44117	FAMILY NOT NAMED	coord: 1..141
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 3..140 score: 15.829

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig97966	contig	H-elongata_contig97966:1210..2159 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig97966.17146.1	mRNA_H-elongata_contig97966.17146.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig97966 1210..2159 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig97966.17146.1 ID=prot_H-elongata_contig97966.17146.1|Name=mRNA_H-elongata_contig97966.17146.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=141bp
ECVEAIYNLGLVNIHLGLPGDSLQAFEKLHTIIPNNTEVIYHIANLYEVS
QGALSTGASKWFTILLARVPSDPGILSRMGHIANKEDDDSQAYFYHKESY
RHYPVNLDVISWLGVWYVKSELYEKAIHYFETASQIQPTEV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom