prot_H-elongata_contig97880.17132.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig97880.17132.1
Unique Nameprot_H-elongata_contig97880.17132.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
BLAST of mRNA_H-elongata_contig97880.17132.1 vs. uniprot
Match: D8LLX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX7_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 1.240e-26
Identity = 47/50 (94.00%), Postives = 49/50 (98.00%), Query Frame = 0
Query:    1 LKQRRLTNAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHW 50
            LKQR+L NA+GITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHW
Sbjct:  147 LKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHW 196          
BLAST of mRNA_H-elongata_contig97880.17132.1 vs. uniprot
Match: A0A836CM28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM28_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.620e-15
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0
Query:    1 LKQRRLTNAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWAN 52
            LK+R+L++A GITGAEG DCDDWM+VDC NLIVH   A+ R+EL+LE  W N
Sbjct:  158 LKRRKLSHAPGITGAEGYDCDDWMIVDCWNLIVHVFEAKYRKELNLEARWEN 209          
BLAST of mRNA_H-elongata_contig97880.17132.1 vs. uniprot
Match: A0A7S2R5J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5J7_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 9.460e-13
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 LKQRRLTNAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWAN 52
            LK+R++  A G +GAEG DCDDWM+VD  N+IVH M  +AR+ LDLE HW N
Sbjct:  150 LKKRKI-KAPGASGAEGYDCDDWMIVDAGNIIVHLMNEKARRLLDLEAHWKN 200          
BLAST of mRNA_H-elongata_contig97880.17132.1 vs. uniprot
Match: A0A0P1A703_PLAHL (Iojap-like ribosome-associated protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A703_PLAHL)

HSP 1 Score: 62.4 bits (150), Expect = 4.150e-10
Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 0
Query:   14 GAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWAN 52
            G EG DCDDWM+ DC+N++VHFM A+ R+ L LE HW N
Sbjct:  224 GVEGRDCDDWMIADCNNIVVHFMRADTRRILALEDHWEN 262          
BLAST of mRNA_H-elongata_contig97880.17132.1 vs. uniprot
Match: A0A485K631_9STRA (Aste57867_1361 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K631_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 4.620e-10
Identity = 28/52 (53.85%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    1 LKQRRLTNAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWAN 52
            +K R + +  G    EG DCDDWM+ D +N+IVHFMTAE R  L LE HW N
Sbjct:  257 MKAREMQDNFGYV-VEGRDCDDWMIADVNNIIVHFMTAETRHMLQLEDHWEN 307          
BLAST of mRNA_H-elongata_contig97880.17132.1 vs. uniprot
Match: A0A3R6VHZ6_9STRA (AP2/ERF domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VHZ6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 9.070e-10
Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    1 LKQRRLTNAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWAN 52
            +K R + +  G    EG DCDDWM+ D +N++VHFMTAE R+ L LE HW N
Sbjct:  293 MKARNMDDDFGYV-VEGRDCDDWMIADVNNIVVHFMTAETRKMLALEDHWEN 343          
BLAST of mRNA_H-elongata_contig97880.17132.1 vs. uniprot
Match: A0A5D6Y9S2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y9S2_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.340e-9
Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 0
Query:   16 EGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWAN 52
            EG DCDDWM+ DC+N++VHFM A+ R+ L LE HW N
Sbjct:  308 EGRDCDDWMIADCNNIVVHFMNADTRRILALEEHWEN 344          
BLAST of mRNA_H-elongata_contig97880.17132.1 vs. uniprot
Match: A0A3F2RH48_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH48_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.420e-9
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0
Query:   14 GAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWAN 52
            G EG DCDDWM+ DC+N++VH M A+ R+ L LE HW N
Sbjct:  143 GVEGRDCDDWMIADCNNIVVHLMHADTRRILALEDHWEN 181          
BLAST of mRNA_H-elongata_contig97880.17132.1 vs. uniprot
Match: K3X3T5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3T5_GLOUD)

HSP 1 Score: 59.3 bits (142), Expect = 4.130e-9
Identity = 22/37 (59.46%), Postives = 29/37 (78.38%), Query Frame = 0
Query:   16 EGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWAN 52
            EG DCDDWM+ DC+N++VHFM  + R+ L+LE HW N
Sbjct:  172 EGRDCDDWMIADCNNIVVHFMREDTRRILNLEDHWEN 208          
BLAST of mRNA_H-elongata_contig97880.17132.1 vs. uniprot
Match: A0A3R7GIQ2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GIQ2_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.210e-9
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0
Query:   14 GAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWAN 52
            G EG DCDDWM+ DC+N++VH M A+ R+ L LE HW N
Sbjct:  259 GVEGRDCDDWMIADCNNIVVHLMHADTRRILALEDHWEN 297          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97880.17132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLX7_ECTSI1.240e-2694.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CM28_9STRA1.620e-1565.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2R5J7_9STRA9.460e-1359.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0P1A703_PLAHL4.150e-1061.54Iojap-like ribosome-associated protein n=1 Tax=Pla... [more]
A0A485K631_9STRA4.620e-1053.85Aste57867_1361 protein n=1 Tax=Aphanomyces stellat... [more]
A0A3R6VHZ6_9STRA9.070e-1051.92AP2/ERF domain-containing protein n=2 Tax=Aphanomy... [more]
A0A5D6Y9S2_9STRA2.340e-962.16Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A3F2RH48_9STRA2.420e-958.97Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
K3X3T5_GLOUD4.130e-959.46Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3R7GIQ2_9STRA4.210e-958.97Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02410RsfScoord: 12..50
e-value: 5.5E-11
score: 42.8
NoneNo IPR availableGENE3D3.30.460.10coord: 1..52
e-value: 1.2E-12
score: 49.5
NoneNo IPR availablePANTHERPTHR21043:SF0MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1coord: 3..51
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 11..51
IPR004394Protein Iojap/ribosomal silencing factor RsfSPANTHERPTHR21043IOJAP SUPERFAMILY ORTHOLOGcoord: 3..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig97880contigH-elongata_contig97880:1060..1215 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig97880.17132.1mRNA_H-elongata_contig97880.17132.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig97880 1060..1215 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig97880.17132.1 ID=prot_H-elongata_contig97880.17132.1|Name=mRNA_H-elongata_contig97880.17132.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
LKQRRLTNAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHW
AN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004394Iojap/RsfS/C7orf30