prot_H-elongata_contig97864.17129.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig97864.17129.1
Unique Nameprot_H-elongata_contig97864.17129.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length66
Homology
BLAST of mRNA_H-elongata_contig97864.17129.1 vs. uniprot
Match: D8LBR5_ECTSI (Vesicle coat complex COPII, subunit SEC31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR5_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.400e-23
Identity = 43/57 (75.44%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRGAITDLAWNPEQGQHIITGKSGLPCPAL 57
            MATAAQNGSCIVWDLKQKKPWCELRDPNR  ITD+AWNP+QGQH++T       P L
Sbjct:  189 MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVTASGDDNNPVL 245          
BLAST of mRNA_H-elongata_contig97864.17129.1 vs. uniprot
Match: A0A6H5KCD9_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD9_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.410e-23
Identity = 43/57 (75.44%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRGAITDLAWNPEQGQHIITGKSGLPCPAL 57
            MATAAQNGSCIVWDLKQKKPWCELRDPNR  ITD+AWNP+QGQH++T       P L
Sbjct:  204 MATAAQNGSCIVWDLKQKKPWCELRDPNRAPITDVAWNPDQGQHLVTASGDDNNPVL 260          
BLAST of mRNA_H-elongata_contig97864.17129.1 vs. uniprot
Match: A0A7S3Y0U1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0U1_HETAK)

HSP 1 Score: 88.2 bits (217), Expect = 4.120e-19
Identity = 35/47 (74.47%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRGAITDLAWNPEQGQHIIT 47
            +ATA QNGSCIVWDL+QKKPWCEL+D  RG I D+AWNP+QG HI+T
Sbjct:  181 LATAGQNGSCIVWDLRQKKPWCELKDTIRGRIADVAWNPDQGLHIVT 227          
BLAST of mRNA_H-elongata_contig97864.17129.1 vs. uniprot
Match: A0A7S2XZL8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZL8_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.240e-17
Identity = 36/57 (63.16%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRGAITDLAWNPEQGQHIITGKSGLPCPAL 57
            +AT+AQNG+CIVWDL+QKKPWCELRD  R  I D+ WNP QG HIIT       P L
Sbjct:  194 LATSAQNGTCIVWDLRQKKPWCELRDAARAPIPDMCWNPTQGLHIITASGDDNNPVL 250          
BLAST of mRNA_H-elongata_contig97864.17129.1 vs. uniprot
Match: T0QPG1_SAPDV (Sec16_C domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QPG1_SAPDV)

HSP 1 Score: 84.0 bits (206), Expect = 2.350e-17
Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRGAITDLAWNPEQGQHIITGKSGLPCPAL 57
            +A  +QNG+  +WDLKQKKPWCEL+DP RGA++ +AWNP +G HIIT  S    P L
Sbjct:  195 LAAGSQNGTVTIWDLKQKKPWCELKDPQRGAVSAIAWNPSEGMHIITASSDDQRPVL 251          
BLAST of mRNA_H-elongata_contig97864.17129.1 vs. uniprot
Match: A0A067BXS0_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BXS0_SAPPC)

HSP 1 Score: 84.0 bits (206), Expect = 2.350e-17
Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRGAITDLAWNPEQGQHIITGKSGLPCPAL 57
            +A  +QNG+  +WDLKQKKPWCEL+DP RGA++ +AWNP +G HIIT  S    P L
Sbjct:  195 LAAGSQNGTVTIWDLKQKKPWCELKDPQRGAVSAIAWNPSEGMHIITASSDDQRPVL 251          
BLAST of mRNA_H-elongata_contig97864.17129.1 vs. uniprot
Match: A0A1V9YA68_9STRA (Sec16_C domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YA68_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 5.990e-17
Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRGAITDLAWNPEQGQHIITGKSGLPCPAL 57
            +A  +Q+GS  +WDLKQKKPWCEL+DP RGA++ +AWNP +G HIIT  S    P L
Sbjct:  195 LAAGSQSGSVTIWDLKQKKPWCELKDPQRGAVSCIAWNPNEGMHIITASSDDQRPVL 251          
BLAST of mRNA_H-elongata_contig97864.17129.1 vs. uniprot
Match: A0A7S2GC77_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GC77_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 8.180e-17
Identity = 31/47 (65.96%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRGAITDLAWNPEQGQHIIT 47
            +A+A+QNGSC+VWDL+ KKPWCELRDP R  I D+AWNP +G H++T
Sbjct:  216 LASASQNGSCMVWDLRSKKPWCELRDPARACIADIAWNPVEGLHMMT 262          
BLAST of mRNA_H-elongata_contig97864.17129.1 vs. uniprot
Match: A0A421FTT1_9STRA (Sec16_C domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A421FTT1_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.120e-16
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRGAITDLAWNPEQGQHIIT 47
            +AT +QNGS +VWDLKQKKPWCELRDP RGA T LAWNP +G  I T
Sbjct:  198 LATGSQNGSVVVWDLKQKKPWCELRDPARGAATALAWNPNEGLQIAT 244          
BLAST of mRNA_H-elongata_contig97864.17129.1 vs. uniprot
Match: A0A3F2RXV8_9STRA (Sec16_C domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXV8_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.120e-16
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    1 MATAAQNGSCIVWDLKQKKPWCELRDPNRGAITDLAWNPEQGQHIIT 47
            +AT +QNGS +VWDLKQKKPWCELRDP RGA T LAWNP +G  I T
Sbjct:  198 LATGSQNGSVVVWDLKQKKPWCELRDPARGAATALAWNPNEGLQIAT 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97864.17129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBR5_ECTSI1.400e-2375.44Vesicle coat complex COPII, subunit SEC31 n=1 Tax=... [more]
A0A6H5KCD9_9PHAE1.410e-2375.44WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A7S3Y0U1_HETAK4.120e-1974.47Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2XZL8_9STRA1.240e-1763.16Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
T0QPG1_SAPDV2.350e-1757.89Sec16_C domain-containing protein n=1 Tax=Saproleg... [more]
A0A067BXS0_SAPPC2.350e-1757.89Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A1V9YA68_9STRA5.990e-1757.89Sec16_C domain-containing protein n=1 Tax=Achlya h... [more]
A0A7S2GC77_9STRA8.180e-1765.96Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A421FTT1_9STRA1.120e-1672.34Sec16_C domain-containing protein n=2 Tax=Phytopht... [more]
A0A3F2RXV8_9STRA1.120e-1672.34Sec16_C domain-containing protein n=4 Tax=Phytopht... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..53
e-value: 8.7E-8
score: 33.6
NoneNo IPR availablePANTHERPTHR13923:SF11SEC31 ORTHOLOG, ISOFORM Dcoord: 2..47
IPR040251Protein transport protein SEC31-likePANTHERPTHR13923SEC31-RELATED PROTEINcoord: 2..47
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 1..15
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig97864contigH-elongata_contig97864:2189..2386 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig97864.17129.1mRNA_H-elongata_contig97864.17129.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig97864 2189..2401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig97864.17129.1 ID=prot_H-elongata_contig97864.17129.1|Name=mRNA_H-elongata_contig97864.17129.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp
MATAAQNGSCIVWDLKQKKPWCELRDPNRGAITDLAWNPEQGQHIITGKS
GLPCPALPCEVSTDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR040251SEC31-like
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf