prot_H-elongata_contig9784.17126.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9784.17126.1
Unique Nameprot_H-elongata_contig9784.17126.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length238
Homology
BLAST of mRNA_H-elongata_contig9784.17126.1 vs. uniprot
Match: D8LFI0_ECTSI (Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI0_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 2.690e-81
Identity = 128/164 (78.05%), Postives = 148/164 (90.24%), Query Frame = 0
Query:   56 LKGKVAVVTGASRGIGKGIAVTLGERGCTVYVTGRSAGGDITEKELGGSLEETVSAIEAAGGKGIAIACDHADDQKVKALFEKVDAEQGRLDVLVNNAFALGTGPQLNAKFWEQGANAWDAPITVGLRSHYIASCFAAPLMIKS-SAKGGEPGLIA--SSWGGV 216
            L+GKVAVVTG+SRGIGKGIAVTLG+RGCTVYVTGRS GG+ T+KE+GGSLEET + IEAAGGKGI +ACDHA D++VKALFEKV++EQGRLD+LVNNAFALG G QL AKFW QGA+AWD+ ITVGLRSHY+ASCFAAPLMIKS   +GG+PGLIA  SS+GG+
Sbjct:   17 LRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDKEIGGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFEKVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYVASCFAAPLMIKSVKDRGGKPGLIACVSSFGGL 180          
BLAST of mRNA_H-elongata_contig9784.17126.1 vs. uniprot
Match: D8LFH4_ECTSI (Short-chain dehydrogenase/reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFH4_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 1.920e-77
Identity = 127/164 (77.44%), Postives = 148/164 (90.24%), Query Frame = 0
Query:   56 LKGKVAVVTGASRGIGKGIAVTLGERGCTVYVTGRSAGGDITEKELGGSLEETVSAIEAAGGKGIAIACDHADDQKVKALFEKVDAEQGRLDVLVNNAFALGTGPQLNAKFWEQGANAWDAPITVGLRSHYIASCFAAPLMIKS-SAKGGEPGLIA--SSWGGV 216
            L+GKVAVVTG+SRGIGKGIAVTLG+RGCTVYVTGRS GG+ T+KE+GGSLEET + IEAAGGKGI +ACDHA D++VKALFE+V++EQGRLD+LVNNAFALG G QL AKFW QGA+AWD+ ITVGLRSHY+ASCFAAPLMIKS   +GG+PGLIA  SS+GG+
Sbjct:   87 LRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDKEIGGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFERVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGL 250          
BLAST of mRNA_H-elongata_contig9784.17126.1 vs. uniprot
Match: A0A7S3USF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USF7_HETAK)

HSP 1 Score: 170 bits (431), Expect = 8.890e-48
Identity = 85/145 (58.62%), Postives = 109/145 (75.17%), Query Frame = 0
Query:   55 SLKGKVAVVTGASRGIGKGIAVTLGERGCTVYVTGRSAGGDITEKELGGSLEETVSAIEAAGGKGIAIACDHADDQKVKALFEKVDAEQGRLDVLVNNAFALGTGPQLNAKFWEQGANAWDAPITVGLRSHYIASCFAAPLMIKS 199
            +L G+VAVVTGASRGIGKG+A+ L ERG TVY+TGRS   D     LGG+L +T + I+AAGGK I I CDHA+D++ +A+FE+V + +GRLD+LVNNAFA+     L   FWEQGA  WDA  TVGLRSHY+ SC A P+M+++
Sbjct:   29 TLDGQVAVVTGASRGIGKGVAIALAERGATVYITGRSL--DFPADPLGGTLRQTQAEIQAAGGKCIPIKCDHANDEQTRAVFEQVQSREGRLDILVNNAFAIPKQKDLFTNFWEQGAEIWDACHTVGLRSHYLCSCHAVPVMLQN 171          
BLAST of mRNA_H-elongata_contig9784.17126.1 vs. uniprot
Match: A0A6J6ICZ2_9ZZZZ (Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A6J6ICZ2_9ZZZZ)

HSP 1 Score: 160 bits (404), Expect = 3.750e-44
Identity = 93/168 (55.36%), Postives = 112/168 (66.67%), Query Frame = 0
Query:   35 RGRCASVTPGPL--VRMSETGSSLKGKVAVVTGASRGIGKGIAVTLGERGCTVYVTGRSAGGDITEKELGGSLEETVSAIEAAGGKGIAIACDHADDQKVKALFEKVDAEQGRLDVLVNNAF-ALGTGPQLNAKFWEQGANAWDAPITVGLRSHYIASCFAAPLMIKS 199
            RG  A+V P P   VRMS++      +VAVVTGASRGIGKGIA+ LG  G TVYVTGR+    +    + G++ ET + I   GG GI +ACDH DD +VKALFE+V  EQGRLDVLVNN + A    P LN KFWE    AWD  I +G RSHY+AS FAAPLM+ +
Sbjct:   28 RGVVAAVDPFPAIEVRMSDS------RVAVVTGASRGIGKGIALELGAAGFTVYVTGRT----VDAGPIPGTVGETAAQISELGGTGIGVACDHHDDDQVKALFERVGVEQGRLDVLVNNVYSAPDLVPWLNKKFWELPVGAWDQVIDIGTRSHYVASVFAAPLMLSN 185          
BLAST of mRNA_H-elongata_contig9784.17126.1 vs. uniprot
Match: A0A428ZNU2_KIBAR (Short-chain dehydrogenase n=1 Tax=Kibdelosporangium aridum TaxID=2030 RepID=A0A428ZNU2_KIBAR)

HSP 1 Score: 158 bits (399), Expect = 7.540e-44
Identity = 82/145 (56.55%), Postives = 103/145 (71.03%), Query Frame = 0
Query:   56 LKGKVAVVTGASRGIGKGIAVTLGERGCTVYVTGRSAGGDITEKELGGSLEETVSAIEAAGGKGIAIACDHADDQKVKALFEKVDAEQGRLDVLVNNAF-ALGTGPQLNAKFWEQGANAWDAPITVGLRSHYIASCFAAPLMIKS 199
            L GKVAVVTGASRG+GKGIA+ LG  G  VY+TGR+    +T   L G++ ET + + A GG+GIAIACDH DD +VKA+F +++AE GRLD+LVNN F A    P LN  FW     AWD  I +GLRSHY+AS FA PL++K+
Sbjct:    5 LAGKVAVVTGASRGVGKGIALELGAAGAVVYLTGRT----VTAGPLPGTIAETAAEVTALGGQGIAIACDHRDDDQVKAVFARLEAEHGRLDILVNNVFSAADIAPWLNRPFWTLPVEAWDQVIDIGLRSHYVASVFAVPLLMKA 145          
BLAST of mRNA_H-elongata_contig9784.17126.1 vs. uniprot
Match: A0A418WFM3_9PROT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Oleomonas cavernae TaxID=2320859 RepID=A0A418WFM3_9PROT)

HSP 1 Score: 157 bits (398), Expect = 1.060e-43
Identity = 81/143 (56.64%), Postives = 104/143 (72.73%), Query Frame = 0
Query:   57 KGKVAVVTGASRGIGKGIAVTLGERGCTVYVTGRSAGGDITEKELGGSLEETVSAIEAAGGKGIAIACDHADDQKVKALFEKVDAEQGRLDVLVNNAFALGTGPQLNAKFWEQGANAWDAPITVGLRSHYIASCFAAPLMIKS 199
            KG+V+VVTGASRG+G+GIA+ LG  G TVYVTGRS   D       G+L+ET +AI AAGG GIA+ACDH DD + KA+F+KV+AEQG+LD+LVNNAFA+     +   FWE+  + W   I VGLRS Y+AS +  PL+IK+
Sbjct:    3 KGRVSVVTGASRGLGRGIAIALGMAGDTVYVTGRSL--DAPSGNWPGTLQETAAAITAAGGTGIAVACDHLDDAQTKAVFDKVEAEQGKLDILVNNAFAMQDLSAMPGNFWERPLDEWQLQIDVGLRSSYVASVYGIPLLIKA 143          
BLAST of mRNA_H-elongata_contig9784.17126.1 vs. uniprot
Match: A0A317DZH3_9PROT (Short-chain dehydrogenase n=3 Tax=Zavarzinia TaxID=204446 RepID=A0A317DZH3_9PROT)

HSP 1 Score: 157 bits (396), Expect = 2.120e-43
Identity = 81/142 (57.04%), Postives = 102/142 (71.83%), Query Frame = 0
Query:   58 GKVAVVTGASRGIGKGIAVTLGERGCTVYVTGRSAGGDITEKELGGSLEETVSAIEAAGGKGIAIACDHADDQKVKALFEKVDAEQGRLDVLVNNAFALGTGPQLNAKFWEQGANAWDAPITVGLRSHYIASCFAAPLMIKS 199
            G+V+VVTGASRG+G+GIA+ LG  G TVYVTGRS   D       G++ ET +AI+AAGGKGIA+ACDH DD + KA+F++V AEQGRLDVLVNNAFA+     L   FWE+G   W   I VGLRS Y+A  +  PL+I++
Sbjct:    4 GRVSVVTGASRGLGRGIAIALGAAGDTVYVTGRSK--DAPTGNWPGTIHETAAAIDAAGGKGIAVACDHLDDAQTKAVFDRVRAEQGRLDVLVNNAFAMQDFSALPGNFWERGLEEWQQQIDVGLRSSYVACVYGIPLLIEA 143          
BLAST of mRNA_H-elongata_contig9784.17126.1 vs. uniprot
Match: A0A6P0IQ30_9CYAN (SDR family NAD(P)-dependent oxidoreductase (Fragment) n=1 Tax=Moorena sp. SIO3I7 TaxID=2607832 RepID=A0A6P0IQ30_9CYAN)

HSP 1 Score: 151 bits (381), Expect = 1.480e-42
Identity = 94/172 (54.65%), Postives = 114/172 (66.28%), Query Frame = 0
Query:   55 SLKGKVAVVTGASRGIGKGIAVTLGERGCTVYVTGRSAGGDITEKELGGSLEETVSAIEAAGGKGIAIACDHADDQKVKALFEKVDAEQ-GRLDVLVNNAF----ALGTGPQLNAKFWEQGANAWDAPITVGLRSHYIASCFAAPLMIKSSAKGGEPGLIA--SSWGGVESL 219
            SLKGKV +VTGASRGIGKGIA+ LGE G TVY+TGRS       + + GSL ET  A++ AGG  I +  DH+DDQ+V+ LFE++  EQ G+LD+LVNNAF    AL  G +    FWE   N WDA   VGLRSHYIAS FAA LMI+      + GLI   S WGG+ S+
Sbjct:    3 SLKGKVTLVTGASRGIGKGIAIGLGEAGATVYITGRSLDSSNVTEGVSGSLRETQLAVQDAGGICIPVMVDHSDDQQVRLLFERIQDEQKGQLDLLVNNAFSGVQALKDGYE--KPFWECPENLWDAVNDVGLRSHYIASVFAARLMIQR-----QQGLICTISYWGGMSSI 167          
BLAST of mRNA_H-elongata_contig9784.17126.1 vs. uniprot
Match: A0A2E5M6Y4_9GAMM (Short-chain dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E5M6Y4_9GAMM)

HSP 1 Score: 154 bits (389), Expect = 1.540e-42
Identity = 88/185 (47.57%), Postives = 118/185 (63.78%), Query Frame = 0
Query:   54 SSLKGKVAVVTGASRGIGKGIAVTLGERGCTVYVTGRSAG-GDITEKELGGSLEETVSAIEAAGGKGIAIACDHADDQKVKALFEKVDAEQGRLDVLVNNAFALGTGPQLNAKFWEQGANAWDAPITVGLRSHYIASCFAAPLMIKS---------SAKGGEPGLIASSWG----GVESLKALIA 224
            S+L GKVAVVTGASRGIGKGIA+ LGE+GC VYVTGRS G G+ T       ++ T   I  AGG+G AI CDH DD+++ ALFE++  E G +D+LVNN + + T P     FWE     WD    +GLRSHY+AS +AAPLM ++         S+ GG+  + ++S+G    G++ L A +A
Sbjct:    2 SNLAGKVAVVTGASRGIGKGIALALGEQGCIVYVTGRSTGDGERT-------IDTTARQITEAGGEGRAIQCDHGDDEQIAALFEQIKQEAGHIDILVNNVYKIPTPPAWGGGFWEHPLGIWDDQAGIGLRSHYVASWYAAPLMFEAEKDQVIVNVSSPGGQTYIYSASYGTGKAGLDRLTADMA 179          
BLAST of mRNA_H-elongata_contig9784.17126.1 vs. uniprot
Match: A0A317IP39_9BACT (Oxidoreductase n=1 Tax=Acidobacteriia bacterium TaxID=2081523 RepID=A0A317IP39_9BACT)

HSP 1 Score: 155 bits (392), Expect = 2.020e-42
Identity = 87/163 (53.37%), Postives = 110/163 (67.48%), Query Frame = 0
Query:   54 SSLKGKVAVVTGASRGIGKGIAVTLGERGCTVYVTGRSAGGDITEKELGGSLEETVSAIEAAGGKGIAIACDHADDQKVKALFEKVDAEQGRLDVLVNNAFALGTGPQLN-AKFWEQGANAWDAPITVGLRSHYIASCFAAPLMIKSSA-----KGGEPGLIA 210
            SSL+G+VAVVTGASRG G+ IA  LGERG TVYVTGRS  G  T + L G++EE+   +   GGKGIA+ CDH ++ +V+ALF+KV  +QGRLD+LVNNA+    G  L  A FW+     WDA    GL+ H +A+ FA PLMI+S+A     K   PGLIA
Sbjct:    9 SSLRGRVAVVTGASRGAGRAIAAVLGERGATVYVTGRSLRGQPTTENLPGTIEESAEEVTRRGGKGIAVRCDHTNEAEVQALFQKVREQQGRLDILVNNAWGGYEGLSLTPAYFWQAPLGLWDAMFERGLKMHLLAAYFAIPLMIESAAMAEGKKSRAPGLIA 171          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9784.17126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFI0_ECTSI2.690e-8178.05Oxidoreductase, short chain dehydrogenase/reductas... [more]
D8LFH4_ECTSI1.920e-7777.44Short-chain dehydrogenase/reductase n=2 Tax=Ectoca... [more]
A0A7S3USF7_HETAK8.890e-4858.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6J6ICZ2_9ZZZZ3.750e-4455.36Unannotated protein n=2 Tax=root TaxID=1 RepID=A0A... [more]
A0A428ZNU2_KIBAR7.540e-4456.55Short-chain dehydrogenase n=1 Tax=Kibdelosporangiu... [more]
A0A418WFM3_9PROT1.060e-4356.64SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]
A0A317DZH3_9PROT2.120e-4357.04Short-chain dehydrogenase n=3 Tax=Zavarzinia TaxID... [more]
A0A6P0IQ30_9CYAN1.480e-4254.65SDR family NAD(P)-dependent oxidoreductase (Fragme... [more]
A0A2E5M6Y4_9GAMM1.540e-4247.57Short-chain dehydrogenase n=1 Tax=Gammaproteobacte... [more]
A0A317IP39_9BACT2.020e-4253.37Oxidoreductase n=1 Tax=Acidobacteriia bacterium Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 60..77
score: 49.8
coord: 144..155
score: 55.63
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 59..201
e-value: 1.7E-20
score: 73.3
NoneNo IPR availableGENE3D3.40.50.720coord: 52..232
e-value: 1.6E-36
score: 127.8
NoneNo IPR availablePANTHERPTHR44147:SF2DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 1coord: 55..200
NoneNo IPR availablePANTHERPTHR44147FAMILY NOT NAMEDcoord: 55..200
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..237
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.796
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 55..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9784contigH-elongata_contig9784:1546..5514 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9784.17126.1mRNA_H-elongata_contig9784.17126.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9784 1387..8369 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9784.17126.1 ID=prot_H-elongata_contig9784.17126.1|Name=mRNA_H-elongata_contig9784.17126.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=238bp
MLILLLMITITVTAPSAGALLLSCSGRKLPYCFARGRCASVTPGPLVRMS
ETGSSLKGKVAVVTGASRGIGKGIAVTLGERGCTVYVTGRSAGGDITEKE
LGGSLEETVSAIEAAGGKGIAIACDHADDQKVKALFEKVDAEQGRLDVLV
NNAFALGTGPQLNAKFWEQGANAWDAPITVGLRSHYIASCFAAPLMIKSS
AKGGEPGLIASSWGGVESLKALIARSNDFMRSTWRTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR036291NAD(P)-bd_dom_sf