prot_H-elongata_contig97720.17116.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig97720.17116.1
Unique Nameprot_H-elongata_contig97720.17116.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length99
Homology
BLAST of mRNA_H-elongata_contig97720.17116.1 vs. uniprot
Match: A0A6H5K8E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8E9_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 9.220e-37
Identity = 66/94 (70.21%), Postives = 76/94 (80.85%), Query Frame = 0
Query:    5 LVPEEAQILIERVLIAGFVLCLLVLVGCGLAIAAEAYFLATKGKLPPDLDSFVVQTIEPLFSPSLVATFGFSSAWGVLKLGQMGQEGVAYKEDD 98
            L+P E Q+++ERV IAGF +CLL LV CG AI  EAYFL+T GKLPPDLD F+V T+EPLF+PSL ATF FSS  GVLKLGQMGQE V Y+EDD
Sbjct:  191 LIPPETQLVMERVFIAGFAVCLLFLVACGCAIGVEAYFLSTNGKLPPDLDKFIVGTLEPLFTPSLGATFLFSSCLGVLKLGQMGQESVVYREDD 284          
BLAST of mRNA_H-elongata_contig97720.17116.1 vs. uniprot
Match: A0A835Z5R9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5R9_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 4.350e-20
Identity = 44/91 (48.35%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    6 VPEEAQILIERVLIAGFVLCLLVLVGCGLAIAAEAYFLATKGKLPPDLDSFVVQTIEPLFSPSLVATFGFSSAWGVLKLGQMGQEGVAYKE 96
            +P E Q  IE+ LI G   CL   +  G+A+  EAY + TK  LP ++D F+V T+EP F+PSL+ T GFSS  G+ KLGQ+G+ GV Y+E
Sbjct:  162 IPVELQGGIEKFLITGIACCLTFFLASGIALGLEAYAVTTKVPLPDNVDQFIVSTLEPAFTPSLLVTLGFSSVLGIFKLGQLGRAGVNYRE 252          
BLAST of mRNA_H-elongata_contig97720.17116.1 vs. uniprot
Match: A0A7S1E063_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E063_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 5.790e-14
Identity = 36/96 (37.50%), Postives = 55/96 (57.29%), Query Frame = 0
Query:    2 LVQLVPEEAQILIERVLIAGFVLCLLVLVGCGLAIAAEAYFLATKGKLPPDLDSFVVQTIEPLFSPSLVATFGFSSAWGVLKLGQMGQEGVAYKED 97
            ++ ++P      I+R L AG  +  L+ +  G AI AEA+  A+K  LP D+D F+V  +EP F+P L+   GFS + G+    Q+G  G  Y+ED
Sbjct:   14 IISVIPAPLLTAIDRFLKAGLAITTLLFIAAGGAITAEAWSKASKSPLPGDIDQFIVNIVEPNFTPCLLVLLGFSVSLGIFAALQLGSSGSQYRED 109          
BLAST of mRNA_H-elongata_contig97720.17116.1 vs. uniprot
Match: A0A7S1YJJ7_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YJJ7_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 2.350e-13
Identity = 38/96 (39.58%), Postives = 54/96 (56.25%), Query Frame = 0
Query:    2 LVQLVPEEAQILIERVLIAGFVLCLLVLVGCGLAIAAEAYFLATKGKLPPDLDSFVVQTIEPLFSPSLVATFGFSSAWGVLKLGQMGQEGVAYKED 97
            L++ +P    + I+R L AG  +  ++ V  GL I  EA+  AT   LP D+D+F+V T+EP F+P L    GFS + GV    Q+G  G  Y ED
Sbjct:  225 LMEALPAPLLVAIDRFLKAGVAVSTVLFVAAGLGITLEAWSTATNSPLPDDIDAFIVNTVEPNFTPGLFVLLGFSVSLGVFAAAQLGSSGSKYTED 320          
BLAST of mRNA_H-elongata_contig97720.17116.1 vs. uniprot
Match: A0A7S3ZRQ2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRQ2_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 5.130e-12
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 0
Query:    6 VPEEAQILIERVLIAGFVLCLLVLVGCGLAIAAEAYFLATKGKLPPDLDSFVVQTIEPLFSPSLVATFGFSSAWGVLKLGQMGQ------EGVAYKEDD 98
            VP++ Q+  E++L+ G +LCL V V  G AI  +A+ +A+   L P + +F+V  +EP F+P+LVA F  S + G LK  Q+        EGV Y E+D
Sbjct:  162 VPDDVQVAAEKILLGGGLLCLAVFVFIGGAITVDAFSVASGSPLEPGMKAFIVDVLEPKFTPTLVAGFACSISLGGLKALQLTSDDAQYSEGVQYSEED 260          
BLAST of mRNA_H-elongata_contig97720.17116.1 vs. uniprot
Match: A0A7S0Y843_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y843_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.850e-10
Identity = 34/96 (35.42%), Postives = 53/96 (55.21%), Query Frame = 0
Query:    2 LVQLVPEEAQILIERVLIAGFVLCLLVLVGCGLAIAAEAYFLATKGKLPPDLDSFVVQTIEPLFSPSLVATFGFSSAWGVLKLGQMGQEGVAYKED 97
            L+Q++P+   + I++ L  G V+C ++ V  GLAI  EA   AT   LP D+D+F++  +EP F+P L     FS   G+    Q+      Y+ED
Sbjct:  161 LLQVIPDPILVFIDKFLKVGVVVCTILFVLAGLAITVEAGSKATANPLPADVDAFIMNVVEPNFTPGLGVLLSFSVGLGLFASLQLNSAASTYRED 256          
BLAST of mRNA_H-elongata_contig97720.17116.1 vs. uniprot
Match: A0A7S3TW81_9SPIT (Hypothetical protein n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3TW81_9SPIT)

HSP 1 Score: 63.9 bits (154), Expect = 3.490e-10
Identity = 35/95 (36.84%), Postives = 55/95 (57.89%), Query Frame = 0
Query:    6 VPEEAQILIERVLIAGFVLCLLVLVGCGLAIAAEAYFLATKGKLPPDLDSFVVQTIEPLFSPSLVATFGFSSAWGVLKLGQMGQE--GVAYKEDD 98
            +P++ Q L+ER    G +L   + +  G+A++ EA        LP  +D F+V T+EP+ +PS++  F FS + G+LK  Q   E  GV Y+EDD
Sbjct:  129 IPKKGQELLERFFGGGAILFGFIFIASGIAVSVEALCKVLDKPLPQFVDDFLVNTVEPILTPSILILFFFSISLGLLKQLQFSSESAGVLYREDD 223          
BLAST of mRNA_H-elongata_contig97720.17116.1 vs. uniprot
Match: A0A7S3L3H2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L3H2_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 4.020e-9
Identity = 32/90 (35.56%), Postives = 50/90 (55.56%), Query Frame = 0
Query:    2 LVQLVPEEAQILIERVLIAGFVLCLLVLVGCGLAIAAEAYFLATKGKLPPDLDSFVVQTIEPLFSPSLVATFGFSSAWGVLKLGQMGQEG 91
            ++ ++P      ++  L  G VL     +  G+ I AEA+  A+   LPPD+D+F+V  +EP F+P L+   GFS + GVL    +G EG
Sbjct:  186 IIAMIPAPVLKALDAFLKGGVVLSGTAFIVAGILITAEAWSKASGQALPPDMDNFIVNVVEPNFTPGLLVVLGFSVSLGVLAAASLGSEG 275          
BLAST of mRNA_H-elongata_contig97720.17116.1 vs. uniprot
Match: A0A7S3QAY9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QAY9_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 4.460e-8
Identity = 31/84 (36.90%), Postives = 44/84 (52.38%), Query Frame = 0
Query:   14 IERVLIAGFVLCLLVLVGCGLAIAAEAYFLATKGKLPPDLDSFVVQTIEPLFSPSLVATFGFSSAWGVLKLGQMGQEGVAYKED 97
            I+  L  G  L  +  V  G  I AEA+ +AT  KLP ++D+F+V  IEP F+P L+    FS   G+    Q+      YKE+
Sbjct:  164 IDAFLKLGLTLSTVAFVLAGFGITAEAWAIATDNKLPENIDNFIVNVIEPNFTPGLLVLLSFSVCLGIFATAQLASGSSMYKEE 247          
BLAST of mRNA_H-elongata_contig97720.17116.1 vs. uniprot
Match: A0A7S1DDA1_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DDA1_CYCTE)

HSP 1 Score: 53.5 bits (127), Expect = 2.800e-6
Identity = 28/75 (37.33%), Postives = 42/75 (56.00%), Query Frame = 0
Query:    2 LVQLVPEEAQILIERVLIAGFVLCLLVLVGCGLAIAAEAYFLATKGKLPPDLDSFVVQTIEPLFSPSLVATFGFS 76
            L+  +PE   I I+R L  G  +  L  V  G+ I AEA+   +   LP ++D+F+V T+EP F+P L+    FS
Sbjct:  162 LIAALPEPVVIAIDRFLKIGVAISTLTFVAAGIGITAEAWSNVSGDPLPENIDNFIVNTVEPNFTPGLLVLLAFS 236          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97720.17116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5K8E9_9PHAE9.220e-3770.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z5R9_9STRA4.350e-2048.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1E063_9STRA5.790e-1437.50Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S1YJJ7_9STRA2.350e-1339.58Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]
A0A7S3ZRQ2_9STRA5.130e-1239.39Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S0Y843_9STRA1.850e-1035.42Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S3TW81_9SPIT3.490e-1036.84Hypothetical protein n=2 Tax=Choreotrichia TaxID=1... [more]
A0A7S3L3H2_9STRA4.020e-935.56Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S3QAY9_9STRA4.460e-836.90Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1DDA1_CYCTE2.800e-637.33Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 17..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..16
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig97720contigH-elongata_contig97720:188..647 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig97720.17116.1mRNA_H-elongata_contig97720.17116.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig97720 188..647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig97720.17116.1 ID=prot_H-elongata_contig97720.17116.1|Name=mRNA_H-elongata_contig97720.17116.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
ALVQLVPEEAQILIERVLIAGFVLCLLVLVGCGLAIAAEAYFLATKGKLP
PDLDSFVVQTIEPLFSPSLVATFGFSSAWGVLKLGQMGQEGVAYKEDD*
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