prot_H-elongata_contig9732.17094.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig9732.17094.1
Unique Nameprot_H-elongata_contig9732.17094.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length161
Homology
BLAST of mRNA_H-elongata_contig9732.17094.1 vs. uniprot
Match: D7FZQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ7_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 2.540e-76
Identity = 117/154 (75.97%), Postives = 132/154 (85.71%), Query Frame = 0
Query:    1 MVTGGRQSRLDTRVSGGRGKLHRCSGSIICGKETSGCPVRARACKQADTVWKVTEVVLEHVACTGKAGAKKHRVCRRSVEDEAAALVKANHSISSPALVKTLKETAGVDISERTANRMRADIFGRGKDAIAGEYQLLDSYCNLLGRDNGNIVEC 154
            M++  RQ RLD RVSGGRGKLHRC+G+II GK TSGCPVRAR CKQ D  WKVTEVVL+HVACTG+AG KK R+ RR VE EAAALV ANHSI+ P+LVKTLK T+GVD+SER+A+RMRADI G+GKDAIA EYQLL S C+LLGRDNGNIVEC
Sbjct:    1 MISQSRQCRLDKRVSGGRGKLHRCTGAIINGKATSGCPVRARGCKQTDGTWKVTEVVLDHVACTGQAGNKKQRINRRCVEGEAAALVSANHSITCPSLVKTLKATSGVDVSERSASRMRADILGKGKDAIAKEYQLLQSSCDLLGRDNGNIVEC 154          
BLAST of mRNA_H-elongata_contig9732.17094.1 vs. uniprot
Match: A0A6H5JX21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX21_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 1.460e-73
Identity = 114/154 (74.03%), Postives = 129/154 (83.77%), Query Frame = 0
Query:    1 MVTGGRQSRLDTRVSGGRGKLHRCSGSIICGKETSGCPVRARACKQADTVWKVTEVVLEHVACTGKAGAKKHRVCRRSVEDEAAALVKANHSISSPALVKTLKETAGVDISERTANRMRADIFGRGKDAIAGEYQLLDSYCNLLGRDNGNIVEC 154
            M++  RQ RLD RVSGGRGKLHRC+G++I GK TSGCPV ARACK  D  WKVTEVVL+HVACTG+AG KK R+ RR VE+EAAALV +N SI+ PAL KTLK T+GVDISERTA RMRADI G+GKD IA EYQLL SYC+LLGRDNGN+VEC
Sbjct:   47 MISTSRQCRLDKRVSGGRGKLHRCTGAVINGKATSGCPVLARACKLHDGTWKVTEVVLDHVACTGQAGNKKQRINRRCVEEEAAALVSSNRSITCPALAKTLKATSGVDISERTAGRMRADILGKGKDTIAKEYQLLQSYCDLLGRDNGNVVEC 200          
BLAST of mRNA_H-elongata_contig9732.17094.1 vs. uniprot
Match: A0A6H5KQC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQC0_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.120e-71
Identity = 114/159 (71.70%), Postives = 129/159 (81.13%), Query Frame = 0
Query:    1 MVTGGRQSRLDTRVSGGRGKLHRCSGSIICGKETSGCPVRARACKQADTVWKVTEVVLEHVACTGKAGAKKHRVCRRSVEDEAAALVKANHSISSPALVKTLKETAGVDISERTANRMRADIFGRGKDAIAGEYQLLDSYCNLLGRDNGNIVECVVSNM 159
            M++  RQ RLD R SGGR KLHRC+G+II GK TSGCPVRAR CKQ D  WKVTE VL+HVACTG+AG KK  + RR VE +AAALV ANHSI+ P+LVKTLK T+GVDISERTA RMR DI G+G DAIA EYQLL +YC+LLGRDNGNIVEC VS +
Sbjct:    1 MISQSRQCRLDKRDSGGRSKLHRCTGAIINGKATSGCPVRARGCKQTDGTWKVTEAVLDHVACTGQAGNKKQGINRRCVEKQAAALVSANHSITCPSLVKTLKATSGVDISERTAGRMRVDILGKGNDAIAKEYQLLQNYCDLLGRDNGNIVECRVSRL 159          
BLAST of mRNA_H-elongata_contig9732.17094.1 vs. uniprot
Match: A0A6H5L4I0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I0_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 6.600e-69
Identity = 115/158 (72.78%), Postives = 130/158 (82.28%), Query Frame = 0
Query:    1 MVTGGRQSRLDTRVSGGRGKLHRCSGSIICGKETSGCPVRARACKQADTVWKVTEVVLEHVACTGKAGAKKHRVCRRSVEDEAAALVKANHSISSPALVKTLKETAGVDISERTANRMRADIFGRGKDAIAGEYQLLDSYCNLLGRDNGNIVECVVSN 158
            M++  RQ RLD RVSGGRGKLHRC+G++I GK TSGCPV ARACK  D  WKVTEVVL+HVACTG+AG KK R+ RR VE+EAAALV +N SI+ PAL KTLK T+GVDISERTA RMRADI G+GKD IA EYQLL SYC+LLGRDNGN+VEC   N
Sbjct:   47 MISTSRQCRLDKRVSGGRGKLHRCTGAVINGKATSGCPVLARACKLHDGTWKVTEVVLDHVACTGQAGNKKQRINRRCVEEEAAALVSSNRSITCPALAKTLKATSGVDISERTAGRMRADILGKGKDTIAKEYQLLQSYCDLLGRDNGNVVECKWDN 204          
BLAST of mRNA_H-elongata_contig9732.17094.1 vs. uniprot
Match: A0A6H5J5Y0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5Y0_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 5.400e-68
Identity = 108/149 (72.48%), Postives = 123/149 (82.55%), Query Frame = 0
Query:    1 MVTGGRQSRLDTRVSGGRGKLHRCSGSIICGKETSGCPVRARACKQADTVWKVTEVVLEHVACTGKAGAKKHRVCRRSVEDEAAALVKANHSISSPALVKTLKETAGVDISERTANRMRADIFGRGKDAIAGEYQLLDSYCNLLGRDNG 149
            M+   RQ RLD R+ GGRGKLHRC+G+I+ GK TSGCPV AR CKQ D  WKVTEVVL+HVACTG+A  KK R+ RR VE EAAALV ANH I+ P+LVKTLK T+GVD+SERTA+RMRADI G+GKDAIA EYQLL SYC+LLGRDNG
Sbjct:  155 MIAQSRQCRLDKRIIGGRGKLHRCTGAIVNGKATSGCPVLARGCKQTDGTWKVTEVVLDHVACTGQASNKKQRINRRCVEREAAALVSANHRITCPSLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYCDLLGRDNG 303          
BLAST of mRNA_H-elongata_contig9732.17094.1 vs. uniprot
Match: A0A6H5L768_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L768_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 5.800e-57
Identity = 96/139 (69.06%), Postives = 111/139 (79.86%), Query Frame = 0
Query:   22 HRCSGSIICGKETSGCPVRARACKQADTVWKVTEVVLEHVACTGKAGAKKHRVCRRSVEDEAAALVKANHSISSPALVKTLKETAGVDISERTANRMRADIFGRGKDAIAGEYQLLDSYCNLLGRDNGNIVECVVSNMY 160
            H C+G+I+ GK TSGCPVRAR CKQ D  WKV +VVL+HVA TG+AG KK R+ RR VE EA  LV ANH I+ P+LVKTLK T+GVD+SERTA+RMRADI G+GKDAIA EYQLL SY +LLGRDN NIVEC VS  +
Sbjct:   19 HYCTGAIVNGKATSGCPVRARGCKQTDGTWKVMDVVLDHVARTGQAGNKKQRINRRCVEGEATGLVSANHRITCPSLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYGDLLGRDNRNIVECKVSRNF 157          
BLAST of mRNA_H-elongata_contig9732.17094.1 vs. uniprot
Match: A0A6H5JZH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH1_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 2.690e-15
Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 0
Query:   30 CGKETSG-CPVRARACKQADTVWKVTEVVLEHVACTGKAGAKKHRVCRRSVEDEAAALVKANHSISSP 96
            CG++    CPVRAR CKQ D  WKVTEVVL+ VAC G+AG +K RV RR  E+EA ALV++NHSI+ P
Sbjct:  251 CGRDKRRRCPVRARGCKQNDGTWKVTEVVLDRVACIGQAGNEKQRVNRRCAEEEAMALVRSNHSITCP 318          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9732.17094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FZQ7_ECTSI2.540e-7675.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JX21_9PHAE1.460e-7374.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQC0_9PHAE1.120e-7171.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4I0_9PHAE6.600e-6972.78SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J5Y0_9PHAE5.400e-6872.48Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L768_9PHAE5.800e-5769.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZH1_9PHAE2.690e-1561.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9732contigH-elongata_contig9732:7336..7818 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9732.17094.1mRNA_H-elongata_contig9732.17094.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig9732 7336..7818 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig9732.17094.1 ID=prot_H-elongata_contig9732.17094.1|Name=mRNA_H-elongata_contig9732.17094.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=161bp
MVTGGRQSRLDTRVSGGRGKLHRCSGSIICGKETSGCPVRARACKQADTV
WKVTEVVLEHVACTGKAGAKKHRVCRRSVEDEAAALVKANHSISSPALVK
TLKETAGVDISERTANRMRADIFGRGKDAIAGEYQLLDSYCNLLGRDNGN
IVECVVSNMY*
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