prot_H-elongata_contig97093.17083.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig97093.17083.1
Unique Name	prot_H-elongata_contig97093.17083.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	118

Homology

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BLAST of mRNA_H-elongata_contig97093.17083.1 vs. uniprot
Match: A0A6H5KWP6_9PHAE (UDP-glucuronate decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWP6_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 2.600e-75
Identity = 111/116 (95.69%), Postives = 115/116 (99.14%), Query Frame = 0

Query:    1 MGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTINMLGLAKRTGARMLLTSTSEVYGDPEEHPQQETYWGHVNPIGPRACYDEGKRVAETMMYAYRNQ 116
            +GHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGT+NMLGLAKRTGARMLLTSTSEVYGDPEEHPQ+ETYWG+VNPIGPRACYDEGKRVAETMMYAY NQ
Sbjct:  194 IGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGNVNPIGPRACYDEGKRVAETMMYAYENQ 309

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BLAST of mRNA_H-elongata_contig97093.17083.1 vs. uniprot
Match: A0A836C7X9_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7X9_9STRA)

HSP 1 Score: 225 bits (574), Expect = 2.200e-70
Identity = 104/116 (89.66%), Postives = 109/116 (93.97%), Query Frame = 0

Query:    1 MGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTINMLGLAKRTGARMLLTSTSEVYGDPEEHPQQETYWGHVNPIGPRACYDEGKRVAETMMYAYRNQ 116
            +GHP F LI HDVVEPI LE+DQIYHLACPASPPHYQYNPIKTIKTSTQGT+NMLGLAKRTGARMLLTSTSEVYGDPEEHPQ+ETYWGHVN +GPRACYDEGKRVAETMMYAY  Q
Sbjct:  147 IGHPHFQLIIHDVVEPIMLEIDQIYHLACPASPPHYQYNPIKTIKTSTQGTLNMLGLAKRTGARMLLTSTSEVYGDPEEHPQRETYWGHVNQLGPRACYDEGKRVAETMMYAYHAQ 262

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BLAST of mRNA_H-elongata_contig97093.17083.1 vs. uniprot
Match: A0A7S3H6G5_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6G5_9STRA)

HSP 1 Score: 222 bits (566), Expect = 5.140e-69
Identity = 101/118 (85.59%), Postives = 112/118 (94.92%), Query Frame = 0

Query:    1 MGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTINMLGLAKRTGARMLLTSTSEVYGDPEEHPQQETYWGHVNPIGPRACYDEGKRVAETMMYAYRNQVN 118
            +GHP+F LI HDV+EPI LEVDQIYHLACPASPPHYQYNPIKTIKTST+GT+NMLGLAKR  ARMLLTSTSEVYGDPE+HPQ+ETYWG+VNPIGPRACYDEGKRVAETMMYAY +Q++
Sbjct:  159 LGHPNFQLIIHDVIEPIMLEVDQIYHLACPASPPHYQYNPIKTIKTSTEGTLNMLGLAKRVKARMLLTSTSEVYGDPEQHPQKETYWGNVNPIGPRACYDEGKRVAETMMYAYESQLD 276

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BLAST of mRNA_H-elongata_contig97093.17083.1 vs. uniprot
Match: A0A8H3LKU5_9GLOM (UDP-glucuronate decarboxylase n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3LKU5_9GLOM)

HSP 1 Score: 214 bits (545), Expect = 9.980e-68
Identity = 98/116 (84.48%), Postives = 104/116 (89.66%), Query Frame = 0

Query:    1 MGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTINMLGLAKRTGARMLLTSTSEVYGDPEEHPQQETYWGHVNPIGPRACYDEGKRVAETMMYAYRNQ 116
            MGHP+F LI HDVV+P  +EVDQIYHLACPASPPHYQYNPIKT+KTS  GTINMLGLAKR  AR LLTSTSEVYGDPEEHPQ ETYWGHVNPIGPRACYDEGKRVAET+ YAY +Q
Sbjct:  147 MGHPNFELIRHDVVDPFLIEVDQIYHLACPASPPHYQYNPIKTVKTSVMGTINMLGLAKRVKARFLLTSTSEVYGDPEEHPQAETYWGHVNPIGPRACYDEGKRVAETLTYAYMHQ 262

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BLAST of mRNA_H-elongata_contig97093.17083.1 vs. uniprot
Match: A0A6V1P8H7_HETAK (UDP-glucuronate decarboxylase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P8H7_HETAK)

HSP 1 Score: 218 bits (554), Expect = 2.710e-67
Identity = 100/115 (86.96%), Postives = 106/115 (92.17%), Query Frame = 0

Query:    2 GHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTINMLGLAKRTGARMLLTSTSEVYGDPEEHPQQETYWGHVNPIGPRACYDEGKRVAETMMYAYRNQ 116
            GHP F L+ HDVVEPI LEVDQIYHLACPASPPHYQ+NPIKTIKTST+GT+NMLGLAKR GAR+LLTSTSEVYGDPE HPQ+E YWGHVNPIGPRACYDEGKRVAETMMYAY  Q
Sbjct:  145 GHPHFTLVEHDVVEPIMLEVDQIYHLACPASPPHYQFNPIKTIKTSTEGTLNMLGLAKRVGARILLTSTSEVYGDPEVHPQREDYWGHVNPIGPRACYDEGKRVAETMMYAYHRQ 259

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BLAST of mRNA_H-elongata_contig97093.17083.1 vs. uniprot
Match: A0A7S2WCV9_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCV9_9STRA)

HSP 1 Score: 215 bits (547), Expect = 2.250e-66
Identity = 98/118 (83.05%), Postives = 109/118 (92.37%), Query Frame = 0

Query:    1 MGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTINMLGLAKRTGARMLLTSTSEVYGDPEEHPQQETYWGHVNPIGPRACYDEGKRVAETMMYAYRNQVN 118
            +GHPSF +I  DVV P+ +EVDQIYHLACPASPPHYQYNPIKTIKTST+GT+NMLGLAKR  AR+LLTSTSE+YGDPEEHPQ+ETYWG+VN IGPRACYDEGKRVAETMMYAY+NQ N
Sbjct:  143 IGHPSFQMIVGDVVNPVYVEVDQIYHLACPASPPHYQYNPIKTIKTSTEGTLNMLGLAKRVRARILLTSTSEIYGDPEEHPQRETYWGNVNAIGPRACYDEGKRVAETMMYAYKNQEN 260

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BLAST of mRNA_H-elongata_contig97093.17083.1 vs. uniprot
Match: A0A1Y2GMY7_9FUNG (UDP-glucuronate decarboxylase n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GMY7_9FUNG)

HSP 1 Score: 215 bits (548), Expect = 2.970e-66
Identity = 98/116 (84.48%), Postives = 105/116 (90.52%), Query Frame = 0

Query:    1 MGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTINMLGLAKRTGARMLLTSTSEVYGDPEEHPQQETYWGHVNPIGPRACYDEGKRVAETMMYAYRNQ 116
            MGHP F LI HDVV+P  +EVDQIYHLACPASPPHYQYNPIKT+KTS  GTINMLGLAKRT AR LLTSTSEVYGDPEEHPQ+ETYWGHVNPIGPRACYDEGKRVAET+ Y+Y +Q
Sbjct:  181 MGHPHFELIRHDVVDPFMIEVDQIYHLACPASPPHYQYNPIKTVKTSVMGTINMLGLAKRTKARFLLTSTSEVYGDPEEHPQKETYWGHVNPIGPRACYDEGKRVAETLTYSYMHQ 296

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BLAST of mRNA_H-elongata_contig97093.17083.1 vs. uniprot
Match: A0A4D9CY17_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY17_9STRA)

HSP 1 Score: 216 bits (549), Expect = 5.320e-66
Identity = 101/116 (87.07%), Postives = 107/116 (92.24%), Query Frame = 0

Query:    1 MGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTINMLGLAKRTGARMLLTSTSEVYGDPEEHPQQETYWGHVNPIGPRACYDEGKRVAETMMYAYRNQ 116
            +GHP F LI HDVVEPI LEVDQIYHLACPASPPHYQYNPIKTIKTST GT+NMLGLAKR  ARMLLTSTSEVYGDP+ HPQ E+YWG+VNPIGPRACYDEGKRVAETMMYAYR+Q
Sbjct:  197 IGHPHFMLIVHDVVEPILLEVDQIYHLACPASPPHYQYNPIKTIKTSTMGTLNMLGLAKRVRARMLLTSTSEVYGDPQIHPQPESYWGNVNPIGPRACYDEGKRVAETMMYAYRSQ 312

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BLAST of mRNA_H-elongata_contig97093.17083.1 vs. uniprot
Match: A0A7S3QF34_9STRA (UDP-glucuronate decarboxylase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QF34_9STRA)

HSP 1 Score: 214 bits (545), Expect = 5.350e-66
Identity = 98/118 (83.05%), Postives = 107/118 (90.68%), Query Frame = 0

Query:    1 MGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTINMLGLAKRTGARMLLTSTSEVYGDPEEHPQQETYWGHVNPIGPRACYDEGKRVAETMMYAYRNQVN 118
            M HP+F L+ HDV +PI+LEVDQIYHLACPASPPHYQYNP+KTIKTST GT+NMLGLAKR  ARMLLTSTSEVYGDPE HPQ ETYWG+VN IGPR+CYDEGKRVAETMMY+YRNQ N
Sbjct:  148 MRHPNFSLVVHDVTQPIRLEVDQIYHLACPASPPHYQYNPVKTIKTSTMGTLNMLGLAKRVKARMLLTSTSEVYGDPEVHPQPETYWGNVNTIGPRSCYDEGKRVAETMMYSYRNQNN 265

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BLAST of mRNA_H-elongata_contig97093.17083.1 vs. uniprot
Match: A0A397TFT7_9GLOM (UDP-glucuronate decarboxylase n=10 Tax=Glomeraceae TaxID=36751 RepID=A0A397TFT7_9GLOM)

HSP 1 Score: 214 bits (545), Expect = 5.760e-66
Identity = 98/116 (84.48%), Postives = 104/116 (89.66%), Query Frame = 0

Query:    1 MGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQGTINMLGLAKRTGARMLLTSTSEVYGDPEEHPQQETYWGHVNPIGPRACYDEGKRVAETMMYAYRNQ 116
            MGHP+F LI HDVV+P  +EVDQIYHLACPASPPHYQYNPIKT+KTS  GTINMLGLAKR  AR LLTSTSEVYGDPEEHPQ ETYWGHVNPIGPRACYDEGKRVAET+ YAY +Q
Sbjct:  169 MGHPNFELIRHDVVDPFLIEVDQIYHLACPASPPHYQYNPIKTVKTSVMGTINMLGLAKRVKARFLLTSTSEVYGDPEEHPQAETYWGHVNPIGPRACYDEGKRVAETLTYAYMHQ 284

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig97093.17083.1 vs. uniprot

BLAST of mRNA_H-elongata_contig97093.17083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KWP6_9PHAE	2.600e-75	95.69	UDP-glucuronate decarboxylase n=2 Tax=Ectocarpus T...	[more]
A0A836C7X9_9STRA	2.200e-70	89.66	UDP-glucuronate decarboxylase n=1 Tax=Tribonema mi...	[more]
A0A7S3H6G5_9STRA	5.140e-69	85.59	UDP-glucuronate decarboxylase n=1 Tax=Spumella elo...	[more]
A0A8H3LKU5_9GLOM	9.980e-68	84.48	UDP-glucuronate decarboxylase n=1 Tax=Rhizophagus ...	[more]
A0A6V1P8H7_HETAK	2.710e-67	86.96	UDP-glucuronate decarboxylase n=1 Tax=Heterosigma ...	[more]
A0A7S2WCV9_9STRA	2.250e-66	83.05	UDP-glucuronate decarboxylase n=1 Tax=Rhizochromul...	[more]
A0A1Y2GMY7_9FUNG	2.970e-66	84.48	UDP-glucuronate decarboxylase n=1 Tax=Lobosporangi...	[more]
A0A4D9CY17_9STRA	5.320e-66	87.07	UDP-glucuronate decarboxylase n=1 Tax=Nannochlorop...	[more]
A0A7S3QF34_9STRA	5.350e-66	83.05	UDP-glucuronate decarboxylase n=1 Tax=Chaetoceros ...	[more]
A0A397TFT7_9GLOM	5.760e-66	84.48	UDP-glucuronate decarboxylase n=10 Tax=Glomeraceae...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 1..118 e-value: 4.5E-37 score: 129.8
None	No IPR available	PANTHER	PTHR43078	FAMILY NOT NAMED	coord: 1..116
IPR016040	NAD(P)-binding domain	PFAM	PF16363	GDP_Man_Dehyd	coord: 19..116 e-value: 1.2E-21 score: 77.5
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 3..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig97093	contig	H-elongata_contig97093:220..1508 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig97093.17083.1	mRNA_H-elongata_contig97093.17083.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig97093 196..1508 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig97093.17083.1 ID=prot_H-elongata_contig97093.17083.1|Name=mRNA_H-elongata_contig97093.17083.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp
MGHPSFHLITHDVVEPIKLEVDQIYHLACPASPPHYQYNPIKTIKTSTQG
TINMLGLAKRTGARMLLTSTSEVYGDPEEHPQQETYWGHVNPIGPRACYD
EGKRVAETMMYAYRNQVN

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016040	NAD(P)-bd_dom
IPR036291	NAD(P)-bd_dom_sf