prot_H-elongata_contig97031.17075.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig97031.17075.1
Unique Nameprot_H-elongata_contig97031.17075.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length190
Homology
BLAST of mRNA_H-elongata_contig97031.17075.1 vs. uniprot
Match: D8LIC2_ECTSI (Eukaryotic initiation factor eIF3 i subunit p36 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC2_ECTSI)

HSP 1 Score: 352 bits (902), Expect = 9.050e-121
Identity = 167/189 (88.36%), Postives = 181/189 (95.77%), Query Frame = 0
Query:    2 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKSGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNIPTDQLEKIASLEIEVPHKMKATKVVWGALNEKLIVSYTDGTLRTFDPIDTTELQYARVG 190
            RPILLKGHERAITCVVYNNDGDLVFTAAKDQIP+LWYAK+GERIGTYQGHQGAVWDLSV+WDSTR++SASADASARMWDVQTGRELVVYNHMGPVRS +FAEG QRFATVSDPFTDSPGLISVFE PD++PTDQLEKIA LEI++P KMKATKVVWGALNEKLIV+Y DGT+RTFDP D TEL+YA+VG
Sbjct:    2 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPPKMKATKVVWGALNEKLIVAYADGTIRTFDPFDGTELEYAQVG 190          
BLAST of mRNA_H-elongata_contig97031.17075.1 vs. uniprot
Match: A0A6H5KMX5_9PHAE (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMX5_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 1.430e-90
Identity = 138/188 (73.40%), Postives = 149/188 (79.26%), Query Frame = 0
Query:    2 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKSGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNIPTDQLEKIASLEIEVPHKMKATKVVWGALNEKLIVSYTDGTLRTFDPIDTTELQYARV 189
            RPILLKGHERAITCVVYNNDGDLVFTA+KDQIP+LWYAK+GERIGTYQGHQG                               RELVVYNHMGPVRS AFAEG QRFATVSDPFTDSPGLISVFE PD++PTDQL+KIASLEI++P KMKAT VVWGALNEKLIVSY DGT+RTFDP D TEL+YA+V
Sbjct:    2 RPILLKGHERAITCVVYNNDGDLVFTASKDQIPSLWYAKTGERIGTYQGHQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELVVYNHMGPVRSVAFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLDKIASLEIDLPPKMKATTVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQV 189          
BLAST of mRNA_H-elongata_contig97031.17075.1 vs. uniprot
Match: A0A835ZF13_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF13_9STRA)

HSP 1 Score: 246 bits (629), Expect = 1.950e-78
Identity = 112/183 (61.20%), Postives = 143/183 (78.14%), Query Frame = 0
Query:    2 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKSGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNIPTDQLEKIASLEIEVPHKMKATKVVWGALNEKLIVSYTDGTLRTFDPIDTTEL 184
            RPILLK HERAITCV+YN DGDLVFTAAKD +PT+W A +GER+GTY GH GAVW+LS  WDS  L+SASADA+ R+WDVQTG  LV Y H GPVRS  +AEG Q+F + S PF DSPG IS+++TP ++   Q +++AS EI +P+K K T+V+W ALN++++ S+ DGT+R FDP +T EL
Sbjct:    2 RPILLKSHERAITCVIYNADGDLVFTAAKDNVPTVWRADTGERLGTYIGHSGAVWELSCRWDSKYLLSASADATVRLWDVQTGESLVSYPHRGPVRSVCWAEGGQKFVSASQPFMDSPGFISIYDTPSDVDPSQYQQVASREISIPNKEKCTEVLWSALNDRILASFEDGTIRVFDP-ETGEL 183          
BLAST of mRNA_H-elongata_contig97031.17075.1 vs. uniprot
Match: A0A6V2RRW4_HETAK (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RRW4_HETAK)

HSP 1 Score: 211 bits (537), Expect = 1.400e-64
Identity = 99/180 (55.00%), Postives = 134/180 (74.44%), Query Frame = 0
Query:    2 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKSGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNIPTDQLEKIASLEIEVPHKMKATKVVWGAL----NEKLIVSYTDGTLRTFD 177
            RPILLKGHER+IT V+YN DGDL+FTA+KD +P++WY+++GERIGTY GH GAVWDL  +WDSTRL+S SADA+ +MWDV+TG E   +NH GPVRS  +AEG Q F +VSDPF +SP  +SV++ PD+   +Q+EKI  LEI++  K        GA     N++++V+  DG++R +D
Sbjct:    2 RPILLKGHERSITKVLYNRDGDLIFTASKDSVPSVWYSENGERIGTYHGHVGAVWDLDCSWDSTRLLSGSADATVKMWDVETGVETCTFNHKGPVRSVRWAEGCQAFVSVSDPFMESPPFVSVYDCPDDADPEQIEKIPRLEIQLDKKSTG-----GAHFIKENKEILVAMEDGSIRIYD 176          
BLAST of mRNA_H-elongata_contig97031.17075.1 vs. uniprot
Match: A0A7S1TX14_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX14_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.860e-61
Identity = 95/184 (51.63%), Postives = 130/184 (70.65%), Query Frame = 0
Query:    2 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKSGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNIPTDQLEKIASLEIEVPHKMKATKVVWGALNEKLIVSYTDGTLRTFDPIDTTELQ 185
            RPILLKGHERA+T V+YN DGDL+F+A+KD  PT+WYA +G R+GT+ GHQG VWDL V  DS+RL++ASADA+ R+WDV+TGREL  Y H GPVR+ A+AEG + FAT ++PF   PG ++V+  P       L  I     E+P +++A ++VW   N++L+++Y DG+L   D     ELQ
Sbjct:   30 RPILLKGHERALTKVMYNKDGDLLFSASKDNKPTVWYADTGVRLGTFNGHQGTVWDLDVTHDSSRLLTASADATVRLWDVRTGRELANYTHRGPVRAVAWAEGGEYFATAAEPFGRYPGQVAVYYCPAGAEEYDLLPIEGRMFEIPPEVRAAQLVWLNNNKELLIAYDDGSLHILDAEFGEELQ 213          
BLAST of mRNA_H-elongata_contig97031.17075.1 vs. uniprot
Match: A0A7R9YCC7_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCC7_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.740e-60
Identity = 93/176 (52.84%), Postives = 132/176 (75.00%), Query Frame = 0
Query:    2 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKSGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNIPTDQLEKIASLEIEVPHKMKATKVVWGALNEKLIVSYTDGTLRTFD 177
            RPILLKGHERA+T V YN DGDL+F+AAKD  PT+WYA +G R+GT+ GHQGAVWDL V++DS+RL++ASADA+ R+W+V+TGREL  Y+H GPVR+ A+AEG Q FAT ++PF   PG I+V+  P +        I +   E+P +++A+++ W   N++++++Y DG+LR  D
Sbjct:   40 RPILLKGHERALTRVKYNADGDLLFSAAKDPKPTVWYADTGVRLGTFNGHQGAVWDLDVSYDSSRLLTASADATVRLWEVRTGRELCQYDHSGPVRAVAWAEGCQYFATAAEPFGKHPGQIAVYYCPSDAEEYDQLPIENRVFEIPPEVRASQIAWLNNNKEILIAYDDGSLRILD 215          
BLAST of mRNA_H-elongata_contig97031.17075.1 vs. uniprot
Match: A0A1Z5K121_FISSO (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K121_FISSO)

HSP 1 Score: 192 bits (489), Expect = 2.950e-57
Identity = 92/181 (50.83%), Postives = 125/181 (69.06%), Query Frame = 0
Query:    2 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKSGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNIPTDQLEKIASLEIEVPH----KMKATKVVWGALNEKLIVSYTDGTLRTFDP 178
            RP LL+GHER IT V +N+DGDL+FTA+KD +P++W  ++GER+GTY GH+G VWDL     + RL++ASAD S R+WDV+TG  + V+NH GPVR  A+AEG+Q F T+SDPF D P  I VF+ P++           LEIE+P      +K T V W ALNE L+V++ +G +R +DP
Sbjct:    2 RPYLLQGHERPITTVQFNHDGDLLFTASKDLVPSVWRVENGERLGTYNGHKGTVWDLDCDRFTKRLLTASADTSCRLWDVRTGECIFVFNHKGPVRGVAWAEGSQMFVTISDPFVDHPAKICVFDAPEDQDPSTYTDPPRLEIELPKINGKVVKPTHVHWTALNEDLLVAFDNGQIRLYDP 182          
BLAST of mRNA_H-elongata_contig97031.17075.1 vs. uniprot
Match: A0A7S2NVM0_9STRA (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NVM0_9STRA)

HSP 1 Score: 189 bits (481), Expect = 4.100e-56
Identity = 91/189 (48.15%), Postives = 127/189 (67.20%), Query Frame = 0
Query:    2 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKSGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNIPTDQLEKIASLEIEVP-----HKMKATKVVWGALNEKLIVSYTDGTLRTFDPIDTTELQ 185
            RPILLKGHER+IT V YN DGDL+FTA+KD +P++W A+ G R+GT+ GH+G +WDL     +T L+SASAD + ++W +  G+ +  Y H GPVR  A+A G Q FAT+SDPF + PG ISVF  P +   +Q  +   LEIE+P      ++ AT VVW  LNE + V++ +G +R +DP +  EL+
Sbjct:    2 RPILLKGHERSITVVKYNRDGDLLFTASKDHVPSVWRAEDGSRLGTFNGHKGTIWDLDSDSTTTYLLSASADTTVKLWSICDGQIIRDYPHRGPVRGVAWAAGGQMFATISDPFVEHPGYISVFAVPKSESPEQWSEKPILEIELPKNNKGQRVNATNVVWLNLNEAIFVTFDNGCIRLYDPENGEELE 190          
BLAST of mRNA_H-elongata_contig97031.17075.1 vs. uniprot
Match: A0A7S1G759_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G759_9STRA)

HSP 1 Score: 181 bits (458), Expect = 5.030e-52
Identity = 90/186 (48.39%), Postives = 124/186 (66.67%), Query Frame = 0
Query:    2 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKSGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFE---TPDNIPTDQLEKIASLEIEVPHKMKATKVVWGALNEKLIVSYTDGTLRTFDPIDTTEL 184
            +PILLKGH R+IT V YN +GDL+FT AKD  PT+WY++ GERIGTY+GH GAV+   V WDS  L++ S D S ++W+VQTG EL  ++H GPVR+ A+AEG + F TV+DP+   P +I ++E    P   PT+   +I S E E+  + K T   W  LN  ++VS   G LRT+D ++T E+
Sbjct:   70 KPILLKGHTRSITYVKYNREGDLIFTCAKDNHPTVWYSEDGERIGTYEGHTGAVYSCDVTWDSQFLLTGSTDQSVKLWNVQTGEELHHWDHAGPVRTVAWAEGDKEFLTVTDPYAGKPAVIRIYEFTGDPTTQPTEPRMEIVS-EKEMGARTKVTHAAWIRLNGVIVVSTESGALRTYD-VETGEM 253          
BLAST of mRNA_H-elongata_contig97031.17075.1 vs. uniprot
Match: A0A7S3L4V7_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4V7_9STRA)

HSP 1 Score: 177 bits (449), Expect = 2.430e-51
Identity = 83/188 (44.15%), Postives = 127/188 (67.55%), Query Frame = 0
Query:    2 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKSGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNIPTDQLEKIASLEIEVPH----KMKATKVVWGALNEKLIVSYTDGTLRTFDPIDTTELQ 185
            RP LL+GHER IT + +N DGDL+FTA+KD +P++W+   G+R+GTY GH+G VWDLS    S RL++ASAD + R+W+VQTG  +  + H GPVR   +AEG+Q+F T++D F D P  ISV++ P+    +      SL I++P     ++  T V W A+NE ++V++ +G ++ +DP +T E++
Sbjct:    2 RPYLLQGHERPITSIEFNYDGDLLFTASKDHVPSVWWVDGGKRLGTYTGHKGTVWDLSCDRFSRRLLTASADTTCRLWNVQTGECIRHFTHTGPVRGVEWAEGSQKFVTINDSFMDHPPKISVYDVPEGQDPESYSDEPSLVIDLPKHATKRVAPTNVKWTAMNEDILVAFDNGMIKLYDP-ETGEMK 188          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97031.17075.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIC2_ECTSI9.050e-12188.36Eukaryotic initiation factor eIF3 i subunit p36 n=... [more]
A0A6H5KMX5_9PHAE1.430e-9073.40Eukaryotic translation initiation factor 3 subunit... [more]
A0A835ZF13_9STRA1.950e-7861.20Eukaryotic translation initiation factor 3 subunit... [more]
A0A6V2RRW4_HETAK1.400e-6455.00Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S1TX14_9STRA1.860e-6151.63Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9YCC7_9STRA1.740e-6052.84Eukaryotic translation initiation factor 3 subunit... [more]
A0A1Z5K121_FISSO2.950e-5750.83Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2NVM0_9STRA4.100e-5648.15Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S1G759_9STRA5.030e-5248.39Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3L4V7_9STRA2.430e-5144.15Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 41..80
e-value: 1.7E-7
score: 40.9
coord: 1..38
e-value: 7.0
score: 11.7
coord: 135..177
e-value: 17.0
score: 9.2
coord: 83..126
e-value: 17.0
score: 9.3
IPR001680WD40 repeatPFAMPF00400WD40coord: 43..80
e-value: 2.8E-4
score: 21.6
coord: 6..33
e-value: 0.035
score: 15.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 48..89
score: 14.118
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 6..47
score: 12.246
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..188
e-value: 8.0E-47
score: 162.1
NoneNo IPR availablePANTHERPTHR19877WD40 REPEAT PROTEINcoord: 2..180
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 67..81
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 6..89
score: 21.832
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 4..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig97031contigH-elongata_contig97031:473..2447 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig97031.17075.1mRNA_H-elongata_contig97031.17075.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig97031 473..2447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig97031.17075.1 ID=prot_H-elongata_contig97031.17075.1|Name=mRNA_H-elongata_contig97031.17075.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=190bp
QRPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKSGERIGTYQG
HQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCA
FAEGAQRFATVSDPFTDSPGLISVFETPDNIPTDQLEKIASLEIEVPHKM
KATKVVWGALNEKLIVSYTDGTLRTFDPIDTTELQYARVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf