prot_H-elongata_contig96967.17070.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig96967.17070.1
Unique Nameprot_H-elongata_contig96967.17070.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length39
Homology
BLAST of mRNA_H-elongata_contig96967.17070.1 vs. uniprot
Match: A0A2V1PAR5_9RHOB (Beta-mannosidase n=1 Tax=Salibaculum griseiflavum TaxID=1914409 RepID=A0A2V1PAR5_9RHOB)

HSP 1 Score: 57.4 bits (137), Expect = 1.620e-8
Identity = 23/30 (76.67%), Postives = 27/30 (90.00%), Query Frame = 0
Query:    1 QPRSFYEACDELGLMVWQDLPYACALYPTT 30
            +P SFYEACDELGLMVWQD  +AC+LYP+T
Sbjct:  354 EPDSFYEACDELGLMVWQDFMFACSLYPST 383          
BLAST of mRNA_H-elongata_contig96967.17070.1 vs. uniprot
Match: A0A7X7GUB9_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X7GUB9_9DELT)

HSP 1 Score: 56.2 bits (134), Expect = 4.130e-8
Identity = 21/27 (77.78%), Postives = 25/27 (92.59%), Query Frame = 0
Query:    3 RSFYEACDELGLMVWQDLPYACALYPT 29
            R+FY+ACDELGL+VWQD PYAC +YPT
Sbjct:  395 RAFYDACDELGLLVWQDFPYACGVYPT 421          
BLAST of mRNA_H-elongata_contig96967.17070.1 vs. uniprot
Match: A0A6B2JLX2_9RHOB (Glycoside hydrolase family 2 protein n=3 Tax=Pseudoroseicyclus tamaricis TaxID=2705421 RepID=A0A6B2JLX2_9RHOB)

HSP 1 Score: 55.1 bits (131), Expect = 1.060e-7
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 0
Query:    1 QPRSFYEACDELGLMVWQDLPYACALYPTT 30
            +P SFY+ACDELGLMVWQD  +AC LYP+T
Sbjct:  336 EPDSFYDACDELGLMVWQDFMFACNLYPST 365          
BLAST of mRNA_H-elongata_contig96967.17070.1 vs. uniprot
Match: UPI001AE47FD6 (glycoside hydrolase family 2 protein n=1 Tax=Rubellimicrobium aerolatum TaxID=490979 RepID=UPI001AE47FD6)

HSP 1 Score: 55.1 bits (131), Expect = 1.060e-7
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 0
Query:    1 QPRSFYEACDELGLMVWQDLPYACALYPTT 30
            +P SFY+ACDELGLMVWQD  +AC LYP+T
Sbjct:  325 EPDSFYDACDELGLMVWQDFMFACNLYPST 354          
BLAST of mRNA_H-elongata_contig96967.17070.1 vs. uniprot
Match: A0A1G0CMA2_9FLAO (Glyco_hydro_2 domain-containing protein n=1 Tax=Fluviicola sp. RIFCSPHIGHO2_12_FULL_43_24 TaxID=1798019 RepID=A0A1G0CMA2_9FLAO)

HSP 1 Score: 54.7 bits (130), Expect = 1.450e-7
Identity = 21/30 (70.00%), Postives = 26/30 (86.67%), Query Frame = 0
Query:    1 QPRSFYEACDELGLMVWQDLPYACALYPTT 30
            QP +FY+ACDELG+MVWQD  +ACA+YP T
Sbjct:  375 QPDAFYDACDELGIMVWQDFMFACAMYPGT 404          
BLAST of mRNA_H-elongata_contig96967.17070.1 vs. uniprot
Match: A0A4Q7ZRU8_9ACTN (Beta-mannosidase n=1 Tax=Krasilnikovia cinnamomea TaxID=349313 RepID=A0A4Q7ZRU8_9ACTN)

HSP 1 Score: 54.7 bits (130), Expect = 1.450e-7
Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 0
Query:    1 QPRSFYEACDELGLMVWQDLPYACALYP 28
            + R+FYE CDELGLMVWQD P+ACA YP
Sbjct:  369 EDRAFYEVCDELGLMVWQDFPFACACYP 396          
BLAST of mRNA_H-elongata_contig96967.17070.1 vs. uniprot
Match: I0HDX9_ACTM4 (Putative glycosyl hydrolase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NBRC 102363 / NCIMB 12654 / NRRL B-3342 / UNCC 431) TaxID=512565 RepID=I0HDX9_ACTM4)

HSP 1 Score: 54.7 bits (130), Expect = 1.450e-7
Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 0
Query:    1 QPRSFYEACDELGLMVWQDLPYACALYP 28
            + R+FYE CDELGLMVWQD P+ACA YP
Sbjct:  354 EDRAFYEVCDELGLMVWQDFPFACACYP 381          
BLAST of mRNA_H-elongata_contig96967.17070.1 vs. uniprot
Match: A0A7W0MR09_9RHOB (Glycoside hydrolase family 2 protein n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A7W0MR09_9RHOB)

HSP 1 Score: 54.7 bits (130), Expect = 1.450e-7
Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 0
Query:    1 QPRSFYEACDELGLMVWQDLPYACALYPTT 30
            +P SFYEACDELGL+VWQD  +AC LYP T
Sbjct:  116 EPPSFYEACDELGLLVWQDFMFACNLYPAT 145          
BLAST of mRNA_H-elongata_contig96967.17070.1 vs. uniprot
Match: A0A128F1F6_9GAMM (Exo-beta-D-glucosaminidase n=5 Tax=Grimontia TaxID=246861 RepID=A0A128F1F6_9GAMM)

HSP 1 Score: 53.9 bits (128), Expect = 2.700e-7
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 0
Query:    5 FYEACDELGLMVWQDLPYACALYPTT 30
            FYE CDELGLMVWQDL +ACALYP+T
Sbjct:  365 FYELCDELGLMVWQDLMFACALYPST 390          
BLAST of mRNA_H-elongata_contig96967.17070.1 vs. uniprot
Match: A0A377HLW0_GRIHO (Exo-beta-D-glucosaminidase n=7 Tax=Grimontia hollisae TaxID=673 RepID=A0A377HLW0_GRIHO)

HSP 1 Score: 53.9 bits (128), Expect = 2.700e-7
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 0
Query:    5 FYEACDELGLMVWQDLPYACALYPTT 30
            FYE CDELGLMVWQDL +ACALYP+T
Sbjct:  365 FYELCDELGLMVWQDLMFACALYPST 390          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig96967.17070.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V1PAR5_9RHOB1.620e-876.67Beta-mannosidase n=1 Tax=Salibaculum griseiflavum ... [more]
A0A7X7GUB9_9DELT4.130e-877.78Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
A0A6B2JLX2_9RHOB1.060e-773.33Glycoside hydrolase family 2 protein n=3 Tax=Pseud... [more]
UPI001AE47FD61.060e-773.33glycoside hydrolase family 2 protein n=1 Tax=Rubel... [more]
A0A1G0CMA2_9FLAO1.450e-770.00Glyco_hydro_2 domain-containing protein n=1 Tax=Fl... [more]
A0A4Q7ZRU8_9ACTN1.450e-775.00Beta-mannosidase n=1 Tax=Krasilnikovia cinnamomea ... [more]
I0HDX9_ACTM41.450e-775.00Putative glycosyl hydrolase n=1 Tax=Actinoplanes m... [more]
A0A7W0MR09_9RHOB1.450e-773.33Glycoside hydrolase family 2 protein n=1 Tax=Rhodo... [more]
A0A128F1F6_9GAMM2.700e-784.62Exo-beta-D-glucosaminidase n=5 Tax=Grimontia TaxID... [more]
A0A377HLW0_GRIHO2.700e-784.62Exo-beta-D-glucosaminidase n=7 Tax=Grimontia holli... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.80coord: 1..38
e-value: 2.1E-11
score: 45.9
NoneNo IPR availablePANTHERPTHR43730FAMILY NOT NAMEDcoord: 4..33
NoneNo IPR availablePANTHERPTHR43730:SF1BETA-MANNOSIDASEcoord: 4..33
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 2..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig96967contigH-elongata_contig96967:1877..1993 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig96967.17070.1mRNA_H-elongata_contig96967.17070.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig96967 1877..1993 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig96967.17070.1 ID=prot_H-elongata_contig96967.17070.1|Name=mRNA_H-elongata_contig96967.17070.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=39bp
QPRSFYEACDELGLMVWQDLPYACALYPTTTASEAAADV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF