prot_H-elongata_contig96909.17064.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig96909.17064.1
Unique Name	prot_H-elongata_contig96909.17064.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	98

Homology

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BLAST of mRNA_H-elongata_contig96909.17064.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 2.470e-22
Identity = 46/92 (50.00%), Postives = 69/92 (75.00%), Query Frame = 0

Query:    4 QNIDLLRRKEGNRVNYTGTVSDCDNCAVTISRQQAHPKTTTRKATKPMELVYTDLMGPITPAAKGGYKYIRRITDDFSRMKDISLLRSNMET 95
            ++++LLR+KE N V+++ +++ CD CA++ SRQ AHP+ T R+ T PM+LVYTD MG  TP AKGG+ Y+ + TD +S MK+I LL++  ET
Sbjct:  321 RSMELLRKKEDNGVDFSDSMTPCDICAISKSRQLAHPEKTNRETTAPMQLVYTDNMGKTTPLAKGGFGYVSKFTDAYSWMKEIYLLKAISET 412

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BLAST of mRNA_H-elongata_contig96909.17064.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 2.520e-18
Identity = 39/94 (41.49%), Postives = 61/94 (64.89%), Query Frame = 0

Query:    4 QNIDLLRRKEGNRVNYTGTVSDCDNCAVTISRQQAHPKTTTRKATKPMELVYTDLMGPITPAAKGGYKYIRRITDDFSRMKDISLLRSNMETAE 97
            +++D+LR+ +GN V Y G +S CD CAV  S+QQ HPK  +  A++P +LV TDLMGP +P A GG+ YI++  D   +  ++ L++    T +
Sbjct:  279 RSLDILRKVQGNGVEYNGELSACDVCAVGNSKQQNHPKRASYDASRPFQLVTTDLMGPFSPPALGGFLYIKKFVDQHIKWNEVFLMKEKSATVD 372

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BLAST of mRNA_H-elongata_contig96909.17064.1 vs. uniprot
Match: A0A6H5KZ34_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ34_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.890e-17
Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query:    1 MKPQNIDLLRRKEGNRVNYTGTVSDCDNCAVTISRQQAHPKTTTRKATKPMELVYTDLMGPITPAAK---GGYKYIRRITDDFSRMKDISLLRSNMETAE 97
            +  +++D+LR+  G  V+Y  ++S C  C +   +Q  HPK +TR+ ++P +LV  D MGP+ P AK   G + Y  +ITDD+++MK++ LLR   +T E
Sbjct:   52 LNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTE 151

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BLAST of mRNA_H-elongata_contig96909.17064.1 vs. uniprot
Match: A0A6H5KMG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG5_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 8.510e-17
Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query:    1 MKPQNIDLLRRKEGNRVNYTGTVSDCDNCAVTISRQQAHPKTTTRKATKPMELVYTDLMGPITPAAK---GGYKYIRRITDDFSRMKDISLLRSNMETAE 97
            +  +++D+LR+  G  V+Y  ++S C  C +   +Q  HPK +TR+ ++P +LV    MGP+ P AK   G + Y+R+ITDD+++MK + LLR   +T E
Sbjct:  341 LNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIGNMGPVNPPAKYKGGSFPYVRKITDDYTKMKKVYLLRKKSDTTE 440

[Close]

BLAST of mRNA_H-elongata_contig96909.17064.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.150e-16
Identity = 37/100 (37.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query:    1 MKPQNIDLLRRKEGNRVNYTGTVSDCDNCAVTISRQQAHPKTTTRKATKPMELVYTDLMGPITPAAK---GGYKYIRRITDDFSRMKDISLLRSNMETAE 97
            +  +++D+LR+  G  V+Y  ++S C  C +   +Q  HPK +TR+ ++P +LV  D MGP+ P AK   G + Y  ++TDD+++MK++ LLR   +T E
Sbjct:  376 LNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTE 475

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BLAST of mRNA_H-elongata_contig96909.17064.1 vs. uniprot
Match: A0A6H5KCM0_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM0_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.540e-16
Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query:    1 MKPQNIDLLRRKEGNRVNYTGTVSDCDNCAVTISRQQAHPKTTTRKATKPMELVYTDLMGPITPAAK---GGYKYIRRITDDFSRMKDISLLRSNMETAE 97
            +  +++D+LR+  G  V+Y  ++S C  C +   +Q  HPK +TR+ ++P +LV  D MGP+ P AK   G + Y  +ITDD+++MK++ LLR   +T E
Sbjct:   52 LNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTE 151

[Close]

BLAST of mRNA_H-elongata_contig96909.17064.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.580e-16
Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query:    1 MKPQNIDLLRRKEGNRVNYTGTVSDCDNCAVTISRQQAHPKTTTRKATKPMELVYTDLMGPITPAAK---GGYKYIRRITDDFSRMKDISLLRSNMETAE 97
            +  +++D+LR+  G  V+Y  ++S C  C +   +Q  HPK +TR+ ++P +LV  D MGP+ P AK   G + Y  +ITDD+++MK++ LLR   +T E
Sbjct:  428 LNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTE 527

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BLAST of mRNA_H-elongata_contig96909.17064.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.590e-16
Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query:    1 MKPQNIDLLRRKEGNRVNYTGTVSDCDNCAVTISRQQAHPKTTTRKATKPMELVYTDLMGPITPAAK---GGYKYIRRITDDFSRMKDISLLRSNMETAE 97
            +  +++D+LR+  G  V+Y  ++S C  C +   +Q  HPK +TR+ ++P +LV  D MGP+ P AK   G + Y  +ITDD+++MK++ LLR   +T E
Sbjct:   52 LNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTE 151

[Close]

BLAST of mRNA_H-elongata_contig96909.17064.1 vs. uniprot
Match: A0A6H5K1R7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R7_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.600e-16
Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query:    1 MKPQNIDLLRRKEGNRVNYTGTVSDCDNCAVTISRQQAHPKTTTRKATKPMELVYTDLMGPITPAAK---GGYKYIRRITDDFSRMKDISLLRSNMETAE 97
            +  +++D+LR+  G  V+Y  ++S C  C +   +Q  HPK +TR+ ++P +LV  D MGP+ P AK   G + Y  +ITDD+++MK++ LLR   +T E
Sbjct:   52 LNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTE 151

[Close]

BLAST of mRNA_H-elongata_contig96909.17064.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.620e-16
Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query:    1 MKPQNIDLLRRKEGNRVNYTGTVSDCDNCAVTISRQQAHPKTTTRKATKPMELVYTDLMGPITPAAK---GGYKYIRRITDDFSRMKDISLLRSNMETAE 97
            +  +++D+LR+  G  V+Y  ++S C  C +   +Q  HPK +TR+ ++P +LV  D MGP+ P AK   G + Y  +ITDD+++MK++ LLR   +T E
Sbjct:   52 LNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTE 151

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig96909.17064.1 vs. uniprot

BLAST of mRNA_H-elongata_contig96909.17064.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JYD3_9PHAE	2.470e-22	50.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K1J1_9PHAE	2.520e-18	41.49	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KZ34_9PHAE	1.890e-17	38.00	Integrase catalytic domain-containing protein n=2 ...	[more]
A0A6H5KMG5_9PHAE	8.510e-17	38.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KVF6_9PHAE	1.150e-16	37.00	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KCM0_9PHAE	1.540e-16	38.00	Integrase catalytic domain-containing protein n=5 ...	[more]
A0A6H5KT84_9PHAE	1.580e-16	38.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K500_9PHAE	1.590e-16	38.00	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K1R7_9PHAE	1.600e-16	38.00	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5JJR8_9PHAE	1.620e-16	38.00	Integrase catalytic domain-containing protein n=11...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 40..97 e-value: 1.4E-6 score: 29.6
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 46..95

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig96909	contig	H-elongata_contig96909:1972..2265 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig96909.17064.1	mRNA_H-elongata_contig96909.17064.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig96909 1948..2265 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig96909.17064.1 ID=prot_H-elongata_contig96909.17064.1|Name=mRNA_H-elongata_contig96909.17064.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
MKPQNIDLLRRKEGNRVNYTGTVSDCDNCAVTISRQQAHPKTTTRKATKP
MELVYTDLMGPITPAAKGGYKYIRRITDDFSRMKDISLLRSNMETAE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR012337	RNaseH-like_sf