prot_H-elongata_contig96883.17062.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig96883.17062.1
Unique Nameprot_H-elongata_contig96883.17062.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length92
Homology
BLAST of mRNA_H-elongata_contig96883.17062.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 4.130e-19
Identity = 51/108 (47.22%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    1 MEDAQASFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWALASIIAGDGATAAGLPTPEE----------------ALRQAHLPIREGGLGLTSSSSIRGAAY 92
            ++D QAS+Q+LRLS   RL +LLRT+ PSIT  AA  +D L+ WA++ I+ G  A   G+PT EE                A  Q HLPIREGGLG+TSS  IR +A+
Sbjct:  161 LDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 268          
BLAST of mRNA_H-elongata_contig96883.17062.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 2.170e-18
Identity = 51/108 (47.22%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    1 MEDAQASFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWALASIIAGDGATAAGLPTPEE----------------ALRQAHLPIREGGLGLTSSSSIRGAAY 92
            ++D QAS+Q+LRLS   RL +LLRT+ PSIT  AA  +D L+ WA++ I+ G  A   G+PT EE                A  Q HLPIREGGLG+TSS  IR +A+
Sbjct:  462 LDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 569          
BLAST of mRNA_H-elongata_contig96883.17062.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 5.120e-18
Identity = 49/108 (45.37%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    1 MEDAQASFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWALASIIAGDGATAAGLPTPEE----------------ALRQAHLPIREGGLGLTSSSSIRGAAY 92
            ++D Q S+Q+LR+S   RL +LLRT+ PSIT  AA  +D+L+ WA++ I+ G  A   G+PT EE                A  Q HLPIREGGLG+TSS  IR +A+
Sbjct:  310 LDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIVLGKMANTVGIPTVEEVPANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 417          
BLAST of mRNA_H-elongata_contig96883.17062.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 78.2 bits (191), Expect = 7.440e-15
Identity = 47/107 (43.93%), Postives = 66/107 (61.68%), Query Frame = 0
Query:    1 MEDAQASFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWALASIIAGD---GATAAGLPTPEEA------------LRQAHLPIREGGLGLTSSSSIRGAAY 92
            ++DAQAS QILR SA +RL++LLR++PP +T +AA+ +D  VE  L +I+ G    G  A   PT E +            +RQA LP+REGGLG+ S+  I G A+
Sbjct: 1497 LDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVEQTLETILNGPSQPGEHAPHEPTEENSPSLPRLNLSPVGIRQARLPVREGGLGIPSTVDISGPAF 1603          
BLAST of mRNA_H-elongata_contig96883.17062.1 vs. uniprot
Match: A0A813A4A6_SYMMI (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813A4A6_SYMMI)

HSP 1 Score: 70.5 bits (171), Expect = 1.430e-12
Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = 0
Query:    1 MEDAQASFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWALASIIAGDGATAAGLPTPEEALRQAHLPIREGGLGLTSSSSIRGAAY 92
            +++ Q+++ +L L A  R +YLLRTVPPS+T   AA++DA +   LA ++AG G     LP+  E  R+A LP+R GGLGL+S+   R AAY
Sbjct:  120 LQELQSAWMLLLLCAAPRCNYLLRTVPPSLTEDFAASHDAAISRCLAVLLAG-GEEPLDLPSLSE--RRAQLPLRMGGLGLSSAREHRQAAY 208          
BLAST of mRNA_H-elongata_contig96883.17062.1 vs. uniprot
Match: A0A1Q9DFD1_SYMMI (Uncharacterized protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DFD1_SYMMI)

HSP 1 Score: 68.6 bits (166), Expect = 6.380e-12
Identity = 40/92 (43.48%), Postives = 61/92 (66.30%), Query Frame = 0
Query:    1 MEDAQASFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWALASIIAGDGATAAGLPTPEEALRQAHLPIREGGLGLTSSSSIRGAAY 92
            +++ Q+ + +L L A  R +YLLRTVPPS+  + AA++DA +   LA ++AG G  +  LP+  E  ++A LP+R GGLGL+S+   R AAY
Sbjct:  108 LQELQSEWMLLLLFAAQRCNYLLRTVPPSLAEEFAASHDAAISRCLAVLLAG-GEDSLDLPSLSE--KRAQLPLRMGGLGLSSAREHRQAAY 196          
BLAST of mRNA_H-elongata_contig96883.17062.1 vs. uniprot
Match: A0A0D3IVF4_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A0D3IVF4_EMIHU)

HSP 1 Score: 63.5 bits (153), Expect = 9.580e-10
Identity = 35/83 (42.17%), Postives = 53/83 (63.86%), Query Frame = 0
Query:   10 ILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWALASIIAGDGATAAGLPTPEEALRQAHLPIREGGLGLTSSSSIRGAAY 92
            +LR  + + L++ LRT+PPS+T  AA  +D L+E AL +++ G        P    A++QA LP+R GG+GLTS+  IR AA+
Sbjct:  207 LLRFCSNTTLTFFLRTMPPSVTQDAAREHDRLMEEALYTLVGG-ARVGRNSPRWRVAVQQARLPVRMGGMGLTSAMDIREAAW 288          
BLAST of mRNA_H-elongata_contig96883.17062.1 vs. uniprot
Match: R1D8Y1_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D8Y1_EMIHU)

HSP 1 Score: 63.5 bits (153), Expect = 9.810e-10
Identity = 35/83 (42.17%), Postives = 53/83 (63.86%), Query Frame = 0
Query:   10 ILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWALASIIAGDGATAAGLPTPEEALRQAHLPIREGGLGLTSSSSIRGAAY 92
            +LR  + + L++ LRT+PPS+T  AA  +D L+E AL +++ G        P    A++QA LP+R GG+GLTS+  IR AA+
Sbjct:   74 LLRFCSNTTLTFFLRTMPPSVTQDAAREHDRLMEEALYTLVGG-ARVGRNSPRWRVAVQQARLPVRMGGMGLTSAMDIREAAW 155          
BLAST of mRNA_H-elongata_contig96883.17062.1 vs. uniprot
Match: A0A0D3JPK8_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A0D3JPK8_EMIHU)

HSP 1 Score: 63.5 bits (153), Expect = 9.960e-10
Identity = 35/83 (42.17%), Postives = 53/83 (63.86%), Query Frame = 0
Query:   10 ILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWALASIIAGDGATAAGLPTPEEALRQAHLPIREGGLGLTSSSSIRGAAY 92
            +LR  + + L++ LRT+PPS+T  AA  +D L+E AL +++ G        P    A++QA LP+R GG+GLTS+  IR AA+
Sbjct:  498 LLRFCSNTTLTFFLRTMPPSVTQDAAREHDRLMEEALYTLVGG-ARVGRNSPRWRVAVQQARLPVRMGGMGLTSAMDIREAAW 579          
BLAST of mRNA_H-elongata_contig96883.17062.1 vs. uniprot
Match: A0A7S3WKE0_EMIHU (Hypothetical protein (Fragment) n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WKE0_EMIHU)

HSP 1 Score: 63.5 bits (153), Expect = 1.010e-9
Identity = 35/83 (42.17%), Postives = 53/83 (63.86%), Query Frame = 0
Query:   10 ILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWALASIIAGDGATAAGLPTPEEALRQAHLPIREGGLGLTSSSSIRGAAY 92
            +LR  + + L++ LRT+PPS+T  AA  +D L+E AL +++ G        P    A++QA LP+R GG+GLTS+  IR AA+
Sbjct:  506 LLRFCSNTTLTFFLRTMPPSVTQDAAREHDRLMEEALYTLVGG-ARVGRNSPRWRVAVQQARLPVRMGGMGLTSAMDIREAAW 587          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig96883.17062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5K541_9PHAE4.130e-1947.22Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KGJ4_9PHAE2.170e-1847.22Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE5.120e-1845.37Reverse transcriptase domain-containing protein (F... [more]
A0A6P0N5L4_9CYAN7.440e-1543.93Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A813A4A6_SYMMI1.430e-1245.65Hypothetical protein n=2 Tax=Symbiodinium TaxID=29... [more]
A0A1Q9DFD1_SYMMI6.380e-1243.48Uncharacterized protein n=2 Tax=Symbiodinium TaxID... [more]
A0A0D3IVF4_EMIHU9.580e-1042.17Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
R1D8Y1_EMIHU9.810e-1042.17Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A0D3JPK8_EMIHU9.960e-1042.17Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A7S3WKE0_EMIHU1.010e-942.17Hypothetical protein (Fragment) n=3 Tax=Emiliania ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig96883contigH-elongata_contig96883:2137..2463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig96883.17062.1mRNA_H-elongata_contig96883.17062.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig96883 2137..2463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig96883.17062.1 ID=prot_H-elongata_contig96883.17062.1|Name=mRNA_H-elongata_contig96883.17062.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
MEDAQASFQILRLSATSRLSYLLRTVPPSITCQAAANYDALVEWALASII
AGDGATAAGLPTPEEALRQAHLPIREGGLGLTSSSSIRGAAY
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