prot_H-elongata_contig96632.17047.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig96632.17047.1
Unique Nameprot_H-elongata_contig96632.17047.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
BLAST of mRNA_H-elongata_contig96632.17047.1 vs. uniprot
Match: D7FQ84_ECTSI (Glycerophosphocholine acyltransferase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ84_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 1.050e-76
Identity = 118/136 (86.76%), Postives = 127/136 (93.38%), Query Frame = 0
Query:    1 AVTGDPRKSVRLHLQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYV--CCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKV 134
            AVTGDP KSVRLHL+EKRSKPF+MRM+DKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVM+PVLLLMRYPDYRQRKWLFFY DFCYYV   CM+AIFV+PH CRL K IF++ MGSLLWAVPLWRNSLVFHDVDK+
Sbjct:  119 AVTGDPLKSVRLHLEEKRSKPFVMRMLDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMVPVLLLMRYPDYRQRKWLFFYYDFCYYVQFWCMVAIFVMPHSCRLLKSIFIFVMGSLLWAVPLWRNSLVFHDVDKM 254          
BLAST of mRNA_H-elongata_contig96632.17047.1 vs. uniprot
Match: A0A836CMU1_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU1_9STRA)

HSP 1 Score: 155 bits (393), Expect = 7.870e-43
Identity = 67/129 (51.94%), Postives = 97/129 (75.19%), Query Frame = 0
Query:    7 RKSVRLHLQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYV--CCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDK 133
            R+ +R H+ +K  +P ++R++DK AFT GVL +++SE+VLL+ PERFW+WYS +IP L+ +RYP YR RKW +F LDFCY+V   CM+ ++V P  C   K+ F++  G L+WA+P WRNSLVFHD++K
Sbjct:   72 REKIRDHILDKGQEPLVVRLLDKVAFTFGVLNIVISEWVLLVYPERFWMWYSAIIPTLIAVRYPYYRMRKWQYFLLDFCYFVHLFCMVQLYVFPDSCMGMKLAFLFANGPLIWAIPSWRNSLVFHDMEK 200          
BLAST of mRNA_H-elongata_contig96632.17047.1 vs. uniprot
Match: W7TS45_9STRA (Glycerophosphocholine acyltransferase 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS45_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.920e-36
Identity = 69/136 (50.74%), Postives = 91/136 (66.91%), Query Frame = 0
Query:    1 AVTGDPRKSVRLHLQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYV--CCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKV 134
            AVTGD  K VR H++E    P + R +DK AFT GVL + VSE++L+  P  FW WY  +IPVL+  R P YR  KW FF LDFCY+V   C++ ++  P +C L K IF+   G L +AVP+WRNSLVFHD++K+
Sbjct:  125 AVTGDEMKRVRDHIRE----PPVARRLDKLAFTFGVLNLTVSEFMLIKFPHVFWAWYMAVIPVLVFFRIPHYRSLKWGFFLLDFCYFVQVLCILQLYAFPSNCNLLKSIFLLANGPLAFAVPVWRNSLVFHDLEKI 256          
BLAST of mRNA_H-elongata_contig96632.17047.1 vs. uniprot
Match: A0A7S1U1R1_9STRA (Glycerophosphocholine acyltransferase 1 (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1R1_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.860e-35
Identity = 63/135 (46.67%), Postives = 93/135 (68.89%), Query Frame = 0
Query:    2 VTGDPRKSVRLHLQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYY--VCCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKV 134
            VTG   K +R  ++EKR++P + R +D+ +FTVGVL ++ SE+VLL  PE F++WY V++ ++L MR  +Y + KW +F +DFCY+  +CC +  F  P  C   KV F+++ G L +AV  WRNSLVFHDVDK+
Sbjct:   28 VTGAADKRIRDFVREKRTEPPVARWLDQISFTVGVLVIVFSEFVLLHAPELFYVWYVVLMTIMLGMRTYEYHKVKWQYFLIDFCYFANLCCFLQTFFAPRSCLATKVNFIFSHGPLCFAVLAWRNSLVFHDVDKM 162          
BLAST of mRNA_H-elongata_contig96632.17047.1 vs. uniprot
Match: A0A7S2B0L6_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0L6_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.190e-32
Identity = 64/134 (47.76%), Postives = 91/134 (67.91%), Query Frame = 0
Query:    2 VTGDPRKSVRLHLQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYV-CCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKV 134
            +TG   +SV  +LQ +R KP ++R++DK++F  GV T++VSE +LLL PE F+LWY++ + VLL+ R+  Y+ +KW +F LDFCY+   C    F  P  C L  + F Y +G L  +V +WRNSLVFHDVDKV
Sbjct:  106 ITGGQSESVLDYLQSQRKKPTVVRLIDKSSFVGGVFTLLVSECILLLYPEYFFLWYTIFMSVLLVARWHSYQFKKWTYFMLDFCYFAQLCNYLQFFFPRSCTLFHMNFAYAVGPLCCSVIIWRNSLVFHDVDKV 239          
BLAST of mRNA_H-elongata_contig96632.17047.1 vs. uniprot
Match: A0A482S386_9ARCH (DUF2838 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S386_9ARCH)

HSP 1 Score: 124 bits (311), Expect = 2.130e-31
Identity = 62/135 (45.93%), Postives = 93/135 (68.89%), Query Frame = 0
Query:    2 VTGDPRKSVRLHLQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYV--CCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKV 134
            VTG+ +K +R HL+E + +P  +++MDK  FT+GVL +   +Y LL +PE F +WY+V++PVLL+ R   +R + W +F LDFCY+V  C ++ I VL  D    K+ F++  GSL  A+P+WRNSL+FHD DK+
Sbjct:   29 VTGNEKKRIRDHLREAQQQPQYVKLMDKLGFTMGVLNITACQYFLLNIPEYFPVWYAVVLPVLLISRLYHFRSQNWHYFLLDFCYFVILCTLLNITVLRSDVFF-KMCFIFATGSLPIAIPVWRNSLIFHDYDKI 162          
BLAST of mRNA_H-elongata_contig96632.17047.1 vs. uniprot
Match: A0A7S1C2R8_9STRA (Glycerophosphocholine acyltransferase 1 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2R8_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.390e-28
Identity = 55/136 (40.44%), Postives = 89/136 (65.44%), Query Frame = 0
Query:    1 AVTGDPRKSVRLHLQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYY--VCCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKV 134
            A+TG+  + VR  ++E+   P  + ++DK AF +GVL M+++E++L+  P+ FW+WY+  +  LL++RY  Y  RKW +F LDFCY   V C++ +F +P +  + ++ F    G L WA+  WRNSLVFH +DK+
Sbjct:  131 ALTGNKDRRVRDMVKEEMKTPMAVTLVDKVAFLLGVLGMLITEFMLVSRPQDFWMWYTATMLPLLVIRYLLYHSRKWHYFMLDFCYAANVLCLVFLFAMPDNPHVFQIAFASANGPLAWAILAWRNSLVFHSLDKL 266          
BLAST of mRNA_H-elongata_contig96632.17047.1 vs. uniprot
Match: A0A6G0WYG3_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYG3_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.950e-26
Identity = 50/124 (40.32%), Postives = 79/124 (63.71%), Query Frame = 0
Query:   13 HLQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYV--CCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKV 134
            H  +    P+ ++ +DK  FT+GVL +++++Y ++  P  FWLWY V  P+++ +R   +++  W +F LDFCY+V  C M  +        L +V+F+Y  G L+WAV LWRNSLVFHDVD++
Sbjct:   53 HEDQSIKDPYYVKFLDKTQFTLGVLGVMLTQYFVVARPSHFWLWYFVCTPIVIALRIIYFKRVGWQYFLLDFCYFVIACSMTHVTFFYDSTHLFRVLFIYANGPLVWAVVLWRNSLVFHDVDRM 176          
BLAST of mRNA_H-elongata_contig96632.17047.1 vs. uniprot
Match: A0A7S3MDK0_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDK0_9STRA)

HSP 1 Score: 111 bits (277), Expect = 7.150e-26
Identity = 55/135 (40.74%), Postives = 83/135 (61.48%), Query Frame = 0
Query:    2 VTGDPRKSVRLHLQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYV--CCMIAIFVLPHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKV 134
            VTGD +K +R  ++E + +P  ++  DK AFTVGVL M V +Y LL  P+ F  WY+ +IP++L  RY  +R     +F +DFCY+   C M+ ++++       K +F+   G L  A+P+WRNS VFHD DK+
Sbjct:   44 VTGDEKKRIRDRIRETQDEPRYVKFFDKVAFTVGVLNMGVCQYFLLNRPDLFPYWYAAIIPLILASRYFYFRSSNNQYFMIDFCYFTIFCTMVNLWLIRDSALFFKTVFICATGPLTLAIPVWRNSFVFHDYDKI 178          
BLAST of mRNA_H-elongata_contig96632.17047.1 vs. uniprot
Match: A0A397CAQ5_9STRA (Glycerophosphocholine acyltransferase 1 n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CAQ5_9STRA)

HSP 1 Score: 109 bits (272), Expect = 8.230e-26
Identity = 49/117 (41.88%), Postives = 80/117 (68.38%), Query Frame = 0
Query:   21 PFMMRMMDKAAFTVGVLTMIVSEYVLLLMPERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYVCCMIAIFVL---PHDCRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKV 134
            P+ ++ +DK  FT+GVL +++++Y ++  P +FW+WY V  PV++ +R   +++  W +F LDFCY+V  +  + V      D RL +V+F+Y  G L+WAV LWRNSLVFHD+D++
Sbjct:   46 PYYVKFLDKTQFTMGVLGVMLTQYFVVARPTQFWMWYLVCTPVVVALRIMYFKRVGWQYFLLDFCYFVTFLSIVHVTLAPSDDRRLFRVLFIYANGPLVWAVVLWRNSLVFHDIDRM 162          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig96632.17047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ84_ECTSI1.050e-7686.76Glycerophosphocholine acyltransferase 1 n=2 Tax=Ec... [more]
A0A836CMU1_9STRA7.870e-4351.94Glycerophosphocholine acyltransferase 1 n=1 Tax=Tr... [more]
W7TS45_9STRA1.920e-3650.74Glycerophosphocholine acyltransferase 1 n=2 Tax=Mo... [more]
A0A7S1U1R1_9STRA3.860e-3546.67Glycerophosphocholine acyltransferase 1 (Fragment)... [more]
A0A7S2B0L6_9STRA1.190e-3247.76Glycerophosphocholine acyltransferase 1 n=1 Tax=Di... [more]
A0A482S386_9ARCH2.130e-3145.93DUF2838 domain-containing protein n=1 Tax=archaeon... [more]
A0A7S1C2R8_9STRA2.390e-2840.44Glycerophosphocholine acyltransferase 1 (Fragment)... [more]
A0A6G0WYG3_9STRA1.950e-2640.32Glycerophosphocholine acyltransferase 1 n=1 Tax=Ap... [more]
A0A7S3MDK0_9STRA7.150e-2640.74Glycerophosphocholine acyltransferase 1 n=1 Tax=Sp... [more]
A0A397CAQ5_9STRA8.230e-2641.88Glycerophosphocholine acyltransferase 1 n=10 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021261Protein of unknown function DUF2838PFAMPF10998DUF2838coord: 28..134
e-value: 2.6E-34
score: 117.8
IPR021261Protein of unknown function DUF2838PANTHERPTHR31201FAMILY NOT NAMEDcoord: 14..134
NoneNo IPR availablePANTHERPTHR31201:SF1coord: 14..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 71..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..102
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..134
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 48..52
NoneNo IPR availableTMHMMTMhelixcoord: 53..70
NoneNo IPR availableTMHMMTMhelixcoord: 77..96
NoneNo IPR availableTMHMMTMhelixcoord: 106..128
NoneNo IPR availableTMHMMTMhelixcoord: 30..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig96632contigH-elongata_contig96632:646..2261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig96632.17047.1mRNA_H-elongata_contig96632.17047.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig96632 646..2261 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig96632.17047.1 ID=prot_H-elongata_contig96632.17047.1|Name=mRNA_H-elongata_contig96632.17047.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
AVTGDPRKSVRLHLQEKRSKPFMMRMMDKAAFTVGVLTMIVSEYVLLLMP
ERFWLWYSVMIPVLLLMRYPDYRQRKWLFFYLDFCYYVCCMIAIFVLPHD
CRLNKVIFMYTMGSLLWAVPLWRNSLVFHDVDKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021261DUF2838