prot_H-elongata_contig96616.17044.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig96616.17044.1
Unique Nameprot_H-elongata_contig96616.17044.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
BLAST of mRNA_H-elongata_contig96616.17044.1 vs. uniprot
Match: D7FSY5_ECTSI (Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY5_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 8.840e-73
Identity = 112/133 (84.21%), Postives = 121/133 (90.98%), Query Frame = 0
Query:    1 NRFYYDFFNKEKQMTDVDLKLIKKEMEKIIKQKLPLLREEVTRIEARERIEALGEPFKLEILDSIKTEPLTLYHIGDQWWDLCAGPHVETTGDLPPKAIELQTLAGAYWRGDEKREALQRIYGTAWQTPSQLK 133
            N FYYDF+N+E  MTD DLK IKKEM+KII+QKLPL+REEVTR EAR RIEALGEPFKLEILDSIKTEP+TLYH+GDQWWDLCAGPHVETTGDLP K IELQTLAGAYWRGDE R ALQRIYGTAW+ P+QLK
Sbjct:  137 NGFYYDFYNEETTMTDSDLKKIKKEMDKIIRQKLPLVREEVTREEARSRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVETTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLK 269          
BLAST of mRNA_H-elongata_contig96616.17044.1 vs. uniprot
Match: A0A6H5JBI8_9PHAE (Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI8_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 1.560e-70
Identity = 112/133 (84.21%), Postives = 121/133 (90.98%), Query Frame = 0
Query:    1 NRFYYDFFNKEKQMTDVDLKLIKKEMEKIIKQKLPLLREEVTRIEARERIEALGEPFKLEILDSIKTEPLTLYHIGDQWWDLCAGPHVETTGDLPPKAIELQTLAGAYWRGDEKREALQRIYGTAWQTPSQLK 133
            N FYYDFFN+E  MTD DLK IKKEM+KII+QKLPL+REEVTR EAR RIEALGEPFKLEILDSIKTEP+TLYH+GDQWWDLCAGPHV+TTGDLP K IELQTLAGAYWRGDE R ALQRIYGTAW+ P+QLK
Sbjct:  136 NGFYYDFFNEETTMTDSDLKEIKKEMDKIIRQKLPLVREEVTREEARRRIEALGEPFKLEILDSIKTEPITLYHVGDQWWDLCAGPHVDTTGDLPQKGIELQTLAGAYWRGDENRPALQRIYGTAWENPAQLK 268          
BLAST of mRNA_H-elongata_contig96616.17044.1 vs. uniprot
Match: A0A835ZFX3_9STRA (Threonine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFX3_9STRA)

HSP 1 Score: 222 bits (565), Expect = 1.940e-66
Identity = 104/131 (79.39%), Postives = 119/131 (90.84%), Query Frame = 0
Query:    3 FYYDFFNKEKQMTDVDLKLIKKEMEKIIKQKLPLLREEVTRIEARERIEALGEPFKLEILDSIKTEPLTLYHIGDQWWDLCAGPHVETTGDLPPKAIELQTLAGAYWRGDEKREALQRIYGTAWQTPSQLK 133
            FYYDFFN +KQ ++ DLK IKKEM++IIK KLPL REEV+R EAR RIEA+GE FKLEILDSIKTEP+T+YHIG++WWDLCAGPHVETTGDLPPKAI+LQ +AGAYWRGDEKRE LQRIYGTAW++P QLK
Sbjct:  133 FYYDFFNADKQFSEDDLKAIKKEMDRIIKSKLPLRREEVSREEARRRIEAIGEKFKLEILDSIKTEPITIYHIGEEWWDLCAGPHVETTGDLPPKAIQLQNVAGAYWRGDEKREMLQRIYGTAWESPEQLK 263          
BLAST of mRNA_H-elongata_contig96616.17044.1 vs. uniprot
Match: A0A7S0D919_9EUKA (Threonine--tRNA ligase n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D919_9EUKA)

HSP 1 Score: 211 bits (538), Expect = 2.990e-63
Identity = 101/134 (75.37%), Postives = 113/134 (84.33%), Query Frame = 0
Query:    1 NRFYYDFFNKEKQMTDVDLKLIKKEMEKIIKQKLPLLREEVTRIEARERIEALGEPFKLEILDSIKTEPLTLYHIGDQWWDLCAGPHVETTGDLPPKAIELQTLAGAYWRGDEKREALQRIYGTAWQTPSQLKV 134
            N FYYDF+N E    + DLK IKKEMEKIIK  LPL REEV+R EA+ RIEA+ EP+KLEILD+IKTEP+T+YHIGD+WWDLCAGPHVETTG LP  AIELQT+AGAYWRGDEKRE LQRIYGTAW+  SQLK 
Sbjct:   22 NGFYYDFYNPENPFQEEDLKKIKKEMEKIIKSDLPLRREEVSREEAKRRIEAINEPYKLEILDAIKTEPITIYHIGDEWWDLCAGPHVETTGKLPKNAIELQTIAGAYWRGDEKREMLQRIYGTAWENKSQLKA 155          
BLAST of mRNA_H-elongata_contig96616.17044.1 vs. uniprot
Match: A0A7S2V1W5_9STRA (Threonine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1W5_9STRA)

HSP 1 Score: 208 bits (530), Expect = 2.060e-61
Identity = 100/135 (74.07%), Postives = 117/135 (86.67%), Query Frame = 0
Query:    1 NRFYYDFFNKEK-QMTDVDLKLIKKEMEKIIKQKLPLLREEVTRIEARERIEALGEPFKLEILDSIKTEPLTLYHIGDQWWDLCAGPHVETTGDLPPKAIELQTLAGAYWRGDEKREALQRIYGTAWQTPSQLKV 134
            N FYYDF++ +    TD DLK IKK+M+KIIK  LPL REEV+R EA++RIEALGEPFKLEILDSIKTEP+TLYH+G++WWDLCAGPHVE+TG LPPKAI+L ++AGAYWRGDEKRE LQRIYGTAW+ P QLK 
Sbjct:  119 NGFYYDFYHTDGGAFTDEDLKKIKKQMDKIIKADLPLRREEVSREEAKKRIEALGEPFKLEILDSIKTEPITLYHVGEEWWDLCAGPHVESTGKLPPKAIQLDSVAGAYWRGDEKREVLQRIYGTAWEDPPQLKA 253          
BLAST of mRNA_H-elongata_contig96616.17044.1 vs. uniprot
Match: W7TW93_9STRA (Threonine--tRNA ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TW93_9STRA)

HSP 1 Score: 200 bits (508), Expect = 4.620e-59
Identity = 95/133 (71.43%), Postives = 113/133 (84.96%), Query Frame = 0
Query:    1 NRFYYDFFNKEKQMTDVDLKLIKKEMEKIIKQKLPLLREEVTRIEARERIEALGEPFKLEILDSIKTEPLTLYHIGDQWWDLCAGPHVETTGDLPPKAIELQTLAGAYWRGDEKREALQRIYGTAWQTPSQLK 133
            N FYYDF   + + T+ DL  IKKEME+IIK++LPL REEVTR EAR+RIEA+ EP+KLEILD IKTEP+T+YHIGD+WWDLCAGPHVE+TGDLP  AI+L++LAGAYWRGDEKR  L RIYGTAW++  QLK
Sbjct:  166 NGFYYDFDTGDTKFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLK 298          
BLAST of mRNA_H-elongata_contig96616.17044.1 vs. uniprot
Match: A0A7S2SSP0_9STRA (Threonine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSP0_9STRA)

HSP 1 Score: 200 bits (509), Expect = 2.000e-58
Identity = 96/133 (72.18%), Postives = 115/133 (86.47%), Query Frame = 0
Query:    1 NRFYYDFFNKEKQ-MTDVDLKLIKKEMEKIIKQKLPLLREEVTRIEARERIEALGEPFKLEILDSIKTEPLTLYHIGDQWWDLCAGPHVETTGDLPPKAIELQTLAGAYWRGDEKREALQRIYGTAWQTPSQL 132
            N FYYDF N ++   T+ DLK IKKEM++IIK+KLPL+REEV+R EAR RIEAL EPFKLEILDSI+TEP+T+YHIGD+WWDLCAGPHVE TG+LPPK I+LQ++AGAYWRGDE R+ L RIYGTAW+  +QL
Sbjct:  101 NGFYYDFKNPDEGGFTESDLKAIKKEMDRIIKKKLPLIREEVSRDEARTRIEALNEPFKLEILDSIETEPITIYHIGDEWWDLCAGPHVEHTGELPPKGIQLQSMAGAYWRGDESRDMLTRIYGTAWEDAAQL 233          
BLAST of mRNA_H-elongata_contig96616.17044.1 vs. uniprot
Match: A0A4D9D5P2_9STRA (Threonine--tRNA ligase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5P2_9STRA)

HSP 1 Score: 200 bits (508), Expect = 7.530e-58
Identity = 95/133 (71.43%), Postives = 113/133 (84.96%), Query Frame = 0
Query:    1 NRFYYDFFNKEKQMTDVDLKLIKKEMEKIIKQKLPLLREEVTRIEARERIEALGEPFKLEILDSIKTEPLTLYHIGDQWWDLCAGPHVETTGDLPPKAIELQTLAGAYWRGDEKREALQRIYGTAWQTPSQLK 133
            N FYYDF   + + T+ DL  IKKEME+IIK++LPL REEVTR EAR+RIEA+ EP+KLEILD IKTEP+T+YHIGD+WWDLCAGPHVE+TGDLP  AI+L++LAGAYWRGDEKR  L RIYGTAW++  QLK
Sbjct:  166 NGFYYDFDTGDTKFTEEDLSKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLK 298          
BLAST of mRNA_H-elongata_contig96616.17044.1 vs. uniprot
Match: A0A3M1KWC7_9CYAN (Threonine--tRNA ligase n=1 Tax=Cyanobacteria bacterium J083 TaxID=2420336 RepID=A0A3M1KWC7_9CYAN)

HSP 1 Score: 196 bits (498), Expect = 3.720e-57
Identity = 93/132 (70.45%), Postives = 114/132 (86.36%), Query Frame = 0
Query:    1 NRFYYDFFNKEKQMTDVDLKLIKKEMEKIIKQKLPLLREEVTRIEARERIEALGEPFKLEILDSIKTEPLTLYHIGDQWWDLCAGPHVETTGDLPPKAIELQTLAGAYWRGDEKREALQRIYGTAWQTPSQL 132
            N FYYDF N E   T+ DLK IKKEM KIIK+KLP++REEV+R EA++RIEA+GEP+KLEILDSI  + +T+YH+G++WWDLCAGPHVETTGD+ PKAI L+T+AGAYWRGDE ++ LQRIYGTAW+TP QL
Sbjct:   57 NGFYYDFDNPEP-FTEKDLKAIKKEMVKIIKRKLPVIREEVSRQEAKKRIEAIGEPYKLEILDSITDDIITIYHLGEEWWDLCAGPHVETTGDINPKAIALETVAGAYWRGDETKQQLQRIYGTAWETPEQL 187          
BLAST of mRNA_H-elongata_contig96616.17044.1 vs. uniprot
Match: A0A7S1VGN3_9STRA (Threonine--tRNA ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VGN3_9STRA)

HSP 1 Score: 197 bits (502), Expect = 4.030e-57
Identity = 95/145 (65.52%), Postives = 115/145 (79.31%), Query Frame = 0
Query:    1 NRFYYDFFNKE------------KQMTDVDLKLIKKEMEKIIKQKLPLLREEVTRIEARERIEALGEPFKLEILDSIKTEPLTLYHIGDQWWDLCAGPHVETTGDLPPKAIELQTLAGAYWRGDEKREALQRIYGTAWQTPSQLK 133
            N FYYDF+  E            +++TD DLK +KK M+KI+ +  P+ REEVTR EAR RIEALGEPFKLEILDSIKTEP+T+YHIG++WWDLCAGPHVE+TG +P KA++LQ++AGAYWRGDEKRE LQRIY TAW+ P QLK
Sbjct:  134 NGFYYDFYFPETTSEETGETIPGRKLTDQDLKKVKKAMDKIVTKNYPITREEVTREEARSRIEALGEPFKLEILDSIKTEPITIYHIGEEWWDLCAGPHVESTGKIPKKALQLQSVAGAYWRGDEKREMLQRIYATAWKDPDQLK 278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig96616.17044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSY5_ECTSI8.840e-7384.21Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JBI8_9PHAE1.560e-7084.21Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP... [more]
A0A835ZFX3_9STRA1.940e-6679.39Threonine--tRNA ligase n=1 Tax=Tribonema minus Tax... [more]
A0A7S0D919_9EUKA2.990e-6375.37Threonine--tRNA ligase n=2 Tax=Amorphochlora amoeb... [more]
A0A7S2V1W5_9STRA2.060e-6174.07Threonine--tRNA ligase n=1 Tax=Fibrocapsa japonica... [more]
W7TW93_9STRA4.620e-5971.43Threonine--tRNA ligase n=1 Tax=Nannochloropsis gad... [more]
A0A7S2SSP0_9STRA2.000e-5872.18Threonine--tRNA ligase n=1 Tax=Rhizochromulina mar... [more]
A0A4D9D5P2_9STRA7.530e-5871.43Threonine--tRNA ligase n=1 Tax=Nannochloropsis sal... [more]
A0A3M1KWC7_9CYAN3.720e-5770.45Threonine--tRNA ligase n=1 Tax=Cyanobacteria bacte... [more]
A0A7S1VGN3_9STRA4.030e-5765.52Threonine--tRNA ligase n=1 Tax=Grammatophora ocean... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012947Threonyl/alanyl tRNA synthetase, SADSMARTSM00863tRNA_SAD_4coord: 70..122
e-value: 2.4E-18
score: 77.0
IPR012947Threonyl/alanyl tRNA synthetase, SADPFAMPF07973tRNA_SADcoord: 71..122
e-value: 3.5E-12
score: 46.2
NoneNo IPR availableGENE3D3.30.980.10coord: 1..126
e-value: 1.0E-38
score: 134.7
NoneNo IPR availablePANTHERPTHR11451:SF48coord: 2..133
IPR002320Threonine-tRNA ligase, class IIaPANTHERPTHR11451TRNA SYNTHETASE-RELATEDcoord: 2..133
IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilySUPERFAMILY55186ThrRS/AlaRS common domaincoord: 1..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig96616contigH-elongata_contig96616:114..1532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig96616.17044.1mRNA_H-elongata_contig96616.17044.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig96616 114..1532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig96616.17044.1 ID=prot_H-elongata_contig96616.17044.1|Name=mRNA_H-elongata_contig96616.17044.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
NRFYYDFFNKEKQMTDVDLKLIKKEMEKIIKQKLPLLREEVTRIEARERI
EALGEPFKLEILDSIKTEPLTLYHIGDQWWDLCAGPHVETTGDLPPKAIE
LQTLAGAYWRGDEKREALQRIYGTAWQTPSQLKVN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012947tRNA_SAD
IPR002320Thr-tRNA-ligase_IIa
IPR018163Thr/Ala-tRNA-synth_IIc_edit